RNA–Protein interactions for RNA: ENST00000554270.5

PTPN21-205, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 4,008 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-205ENST00000554270 ADGRL3Q9HAR2 1447 aa13.21□□□□□ -0.29
PTPN21-205ENST00000554270 H7C1W4 665 aa13.21□□□□□ -0.29
PTPN21-205ENST00000554270 SLU7O95391 586 aaKnown RBP13.21□□□□□ -0.29
PTPN21-205ENST00000554270 NPHP4O75161 1426 aaPredicted RBP13.21□□□□□ -0.29
PTPN21-205ENST00000554270 IRS4O14654 1257 aaPredicted RBP13.21□□□□□ -0.29
PTPN21-205ENST00000554270 IARSP41252 1262 aaKnown RBP13.21□□□□□ -0.29
PTPN21-205ENST00000554270 AFMP43652 599 aa13.21□□□□□ -0.29
PTPN21-205ENST00000554270 GNG11P61952 73 aa13.21□□□□□ -0.29
PTPN21-205ENST00000554270 BBXQ8WY36 941 aaPredicted RBP13.21□□□□□ -0.29
PTPN21-205ENST00000554270 ST7Q9NRC1 585 aa13.21□□□□□ -0.29
PTPN21-205ENST00000554270 COBLO75128 1261 aa13.21□□□□□ -0.3
PTPN21-205ENST00000554270 VPS37DQ86XT2 251 aa13.21□□□□□ -0.3
PTPN21-205ENST00000554270 DSCC1Q9BVC3 393 aa13.21□□□□□ -0.3
PTPN21-205ENST00000554270 KCNJ14Q9UNX9 436 aa13.21□□□□□ -0.3
PTPN21-205ENST00000554270 PHKA1P46020 1223 aa13.2□□□□□ -0.3
PTPN21-205ENST00000554270 PLA2G4DQ86XP0 818 aa13.2□□□□□ -0.3
PTPN21-205ENST00000554270 MAGEB6Q8N7X4 407 aa13.2□□□□□ -0.3
PTPN21-205ENST00000554270 EPC1Q9H2F5 836 aa13.2□□□□□ -0.3
PTPN21-205ENST00000554270 ARMT1Q9H993 441 aa13.2□□□□□ -0.3
PTPN21-205ENST00000554270 RNF216Q9NWF9 866 aaPredicted RBP13.2□□□□□ -0.3
PTPN21-205ENST00000554270 KIAA1468Q9P260 1216 aa13.2□□□□□ -0.3
PTPN21-205ENST00000554270 CARMIL3Q8ND23 1372 aa13.2□□□□□ -0.3
PTPN21-205ENST00000554270 ERICH2A1L162 156 aa13.2□□□□□ -0.3
PTPN21-205ENST00000554270 MYSM1Q5VVJ2 828 aa13.2□□□□□ -0.3
PTPN21-205ENST00000554270 KCNG4Q8TDN1 519 aa13.2□□□□□ -0.3
PTPN21-205ENST00000554270 SENP2Q9HC62 589 aa13.2□□□□□ -0.3
PTPN21-205ENST00000554270 RCOR1Q9UKL0 485 aa13.2□□□□□ -0.3
PTPN21-205ENST00000554270 SLC12A7Q9Y666 1083 aa13.2□□□□□ -0.3
PTPN21-205ENST00000554270 KDM6AO15550 1401 aaPredicted RBP13.2□□□□□ -0.3
PTPN21-205ENST00000554270 PFKFB1P16118 471 aa13.2□□□□□ -0.3
PTPN21-205ENST00000554270 GTF2F1P35269 517 aaKnown RBP eCLIP13.2□□□□□ -0.3
PTPN21-205ENST00000554270 FANCCQ00597 558 aa13.2□□□□□ -0.3
PTPN21-205ENST00000554270 ANO1Q5XXA6 986 aa13.2□□□□□ -0.3
PTPN21-205ENST00000554270 JMYQ8N9B5 988 aa13.2□□□□□ -0.3
PTPN21-205ENST00000554270 STAMQ92783 540 aa13.2□□□□□ -0.3
PTPN21-205ENST00000554270 KCNB2Q92953 911 aa13.2□□□□□ -0.3
PTPN21-205ENST00000554270 ADAMTS2O95450 1211 aa13.19□□□□□ -0.3
PTPN21-205ENST00000554270 GSDMDP57764 484 aa13.19□□□□□ -0.3
PTPN21-205ENST00000554270 TCIRG1Q13488 830 aa13.19□□□□□ -0.3
PTPN21-205ENST00000554270 NWD1Q149M9 1564 aa13.19□□□□□ -0.3
PTPN21-205ENST00000554270 NAA16Q6N069 864 aaPredicted RBP13.19□□□□□ -0.3
PTPN21-205ENST00000554270 CCDC24Q8N4L8 307 aa13.19□□□□□ -0.3
PTPN21-205ENST00000554270 CCDC34Q96HJ3 373 aa13.19□□□□□ -0.3
PTPN21-205ENST00000554270 UTYO14607 1347 aa13.19□□□□□ -0.3
PTPN21-205ENST00000554270 ZNF532Q9HCE3 1301 aa13.19□□□□□ -0.3
PTPN21-205ENST00000554270 ZBTB43O43298 467 aa13.19□□□□□ -0.3
PTPN21-205ENST00000554270 RABL6Q3YEC7 729 aaPredicted RBP13.19□□□□□ -0.3
PTPN21-205ENST00000554270 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.19□□□□□ -0.3
PTPN21-205ENST00000554270 KRT222Q8N1A0 295 aa13.19□□□□□ -0.3
PTPN21-205ENST00000554270 APPBP2Q92624 585 aa13.19□□□□□ -0.3
PTPN21-205ENST00000554270 RAI14Q9P0K7 980 aa13.19□□□□□ -0.3
PTPN21-205ENST00000554270 PRDM1O75626 825 aa13.19□□□□□ -0.3
PTPN21-205ENST00000554270 ZSCAN20P17040 1043 aaPredicted RBP13.19□□□□□ -0.3
PTPN21-205ENST00000554270 USPL1Q5W0Q7 1092 aa13.19□□□□□ -0.3
PTPN21-205ENST00000554270 MEGF6O75095 1541 aa13.19□□□□□ -0.3
PTPN21-205ENST00000554270 MBD4O95243 580 aa13.18□□□□□ -0.3
PTPN21-205ENST00000554270 FDPSP14324 419 aaKnown RBP13.18□□□□□ -0.3
PTPN21-205ENST00000554270 LLPHQ9BRT6 129 aaKnown RBP13.18□□□□□ -0.3
PTPN21-205ENST00000554270 ARGLU1Q9NWB6 273 aaPredicted RBP13.18□□□□□ -0.3
PTPN21-205ENST00000554270 OGFRQ9NZT2 677 aa13.18□□□□□ -0.3
PTPN21-205ENST00000554270 WWC3Q9ULE0 1092 aa13.18□□□□□ -0.3
PTPN21-205ENST00000554270 NEMFO60524 1076 aa13.18□□□□□ -0.3
PTPN21-205ENST00000554270 DMTNQ08495 405 aa13.18□□□□□ -0.3
PTPN21-205ENST00000554270 IQCB1Q15051 598 aa13.18□□□□□ -0.3
PTPN21-205ENST00000554270 CARD6Q9BX69 1037 aa13.18□□□□□ -0.3
PTPN21-205ENST00000554270 PCDH11XQ9BZA7 1347 aa13.18□□□□□ -0.3
PTPN21-205ENST00000554270 PCDH11YQ9BZA8 1340 aa13.18□□□□□ -0.3
PTPN21-205ENST00000554270 CAVIN2O95810 425 aa13.18□□□□□ -0.3
PTPN21-205ENST00000554270 ADKP55263 362 aaKnown RBP13.18□□□□□ -0.3
PTPN21-205ENST00000554270 DESI2Q9BSY9 194 aa13.18□□□□□ -0.3
PTPN21-205ENST00000554270 BTG4Q9NY30 223 aa13.18□□□□□ -0.3
PTPN21-205ENST00000554270 KIF28PB7ZC32 967 aa13.17□□□□□ -0.3
PTPN21-205ENST00000554270 PRKAB2O43741 272 aa13.17□□□□□ -0.3
PTPN21-205ENST00000554270 MCAMP43121 646 aa13.17□□□□□ -0.3
PTPN21-205ENST00000554270 KRT40Q6A162 431 aa13.17□□□□□ -0.3
PTPN21-205ENST00000554270 TMCO3Q6UWJ1 677 aa13.17□□□□□ -0.3
PTPN21-205ENST00000554270 FBXO18Q8NFZ0 1043 aa13.17□□□□□ -0.3
PTPN21-205ENST00000554270 LZTFL1Q9NQ48 299 aa13.17□□□□□ -0.3
PTPN21-205ENST00000554270 HEG1Q9ULI3 1381 aa13.17□□□□□ -0.3
PTPN21-205ENST00000554270 KCNQ4P56696 695 aa13.17□□□□□ -0.3
PTPN21-205ENST00000554270 CCDC102BQ68D86 513 aa13.17□□□□□ -0.3
PTPN21-205ENST00000554270 ADALQ6DHV7 355 aa13.17□□□□□ -0.3
PTPN21-205ENST00000554270 GRAMD1CQ8IYS0 662 aa13.17□□□□□ -0.3
PTPN21-205ENST00000554270 ZNF397Q8NF99 534 aaPredicted RBP13.17□□□□□ -0.3
PTPN21-205ENST00000554270 FBXO38Q6PIJ6 1188 aa13.17□□□□□ -0.3
PTPN21-205ENST00000554270 LINC00301Q8NCQ3 95 aa13.17□□□□□ -0.3
PTPN21-205ENST00000554270 ZBTB1Q9Y2K1 713 aa13.17□□□□□ -0.3
PTPN21-205ENST00000554270 NUTM2BA6NNL0 878 aaPredicted RBP13.17□□□□□ -0.3
PTPN21-205ENST00000554270 NUTM2EB1AL46 878 aaPredicted RBP13.17□□□□□ -0.3
PTPN21-205ENST00000554270 RANBP6O60518 1105 aaKnown RBP13.17□□□□□ -0.3
PTPN21-205ENST00000554270 NUTM2AQ8IVF1 878 aaPredicted RBP13.17□□□□□ -0.3
PTPN21-205ENST00000554270 TRIM22Q8IYM9 498 aa13.17□□□□□ -0.3
PTPN21-205ENST00000554270 FANCLQ9NW38 375 aa13.17□□□□□ -0.3
PTPN21-205ENST00000554270 SH3TC1Q8TE82 1336 aa13.16□□□□□ -0.3
PTPN21-205ENST00000554270 DHX40Q8IX18 779 aaKnown RBP13.16□□□□□ -0.3
PTPN21-205ENST00000554270 MRFAP1L1Q96HT8 127 aa13.16□□□□□ -0.3
PTPN21-205ENST00000554270 ANGEL1Q9UNK9 670 aaKnown RBP13.16□□□□□ -0.3
PTPN21-205ENST00000554270 EXOSC10Q01780 885 aaKnown RBP13.16□□□□□ -0.3
PTPN21-205ENST00000554270 DZIP3Q86Y13 1208 aaKnown RBP13.16□□□□□ -0.3
PTPN21-205ENST00000554270 SMARCC2Q8TAQ2 1214 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms