RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 ELP3Q9H9T3 547 aa14.68□□□□□ -0.06
TUBB3-204ENST00000554116 CHMP3Q9Y3E7 222 aa14.68□□□□□ -0.06
TUBB3-204ENST00000554116 SALL2Q9Y467 1007 aaPredicted RBP14.68□□□□□ -0.06
TUBB3-204ENST00000554116 EN2P19622 333 aaPredicted RBP14.67□□□□□ -0.06
TUBB3-204ENST00000554116 IREB2P48200 963 aaKnown RBP14.67□□□□□ -0.06
TUBB3-204ENST00000554116 UBE4AQ14139 1066 aa14.67□□□□□ -0.06
TUBB3-204ENST00000554116 MFSD14BQ5SR56 506 aa14.67□□□□□ -0.06
TUBB3-204ENST00000554116 DZIP1LQ8IYY4 767 aaKnown RBP14.67□□□□□ -0.06
TUBB3-204ENST00000554116 TMEM39BQ9GZU3 492 aa14.67□□□□□ -0.06
TUBB3-204ENST00000554116 SERPINA10Q9UK55 444 aa14.67□□□□□ -0.06
TUBB3-204ENST00000554116 TTF2Q9UNY4 1162 aaKnown RBP14.67□□□□□ -0.06
TUBB3-204ENST00000554116 A0A0C4DFX4 3053 aa14.67□□□□□ -0.06
TUBB3-204ENST00000554116 MYO1BO43795 1136 aa14.66□□□□□ -0.06
TUBB3-204ENST00000554116 RBM5P52756 815 aaKnown RBP eCLIP14.66□□□□□ -0.06
TUBB3-204ENST00000554116 SP3Q02447 781 aa14.66□□□□□ -0.06
TUBB3-204ENST00000554116 CCDC57Q2TAC2 916 aa14.66□□□□□ -0.06
TUBB3-204ENST00000554116 FBXO33Q7Z6M2 555 aa14.66□□□□□ -0.06
TUBB3-204ENST00000554116 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.66□□□□□ -0.06
TUBB3-204ENST00000554116 ERO1AQ96HE7 468 aa14.66□□□□□ -0.06
TUBB3-204ENST00000554116 CNNM1Q9NRU3 951 aa14.66□□□□□ -0.06
TUBB3-204ENST00000554116 TRIOBPQ9H2D6 2365 aa14.66□□□□□ -0.06
TUBB3-204ENST00000554116 LAMA3Q16787 3333 aa14.65□□□□□ -0.06
TUBB3-204ENST00000554116 NBPF7P0C2Y1 421 aaPredicted RBP14.65□□□□□ -0.06
TUBB3-204ENST00000554116 HIBADHP31937 336 aaKnown RBP14.65□□□□□ -0.06
TUBB3-204ENST00000554116 CRKP46108 304 aa14.65□□□□□ -0.06
TUBB3-204ENST00000554116 FXR1P51114 621 aaKnown RBP eCLIP14.65□□□□□ -0.06
TUBB3-204ENST00000554116 VGLL4Q14135 290 aa14.65□□□□□ -0.06
TUBB3-204ENST00000554116 FAM9BQ8IZU0 186 aa14.65□□□□□ -0.06
TUBB3-204ENST00000554116 FAM43AQ8N2R8 423 aa14.65□□□□□ -0.06
TUBB3-204ENST00000554116 VGLL2Q8N8G2 317 aa14.65□□□□□ -0.06
TUBB3-204ENST00000554116 EFCC1Q9HA90 598 aa14.65□□□□□ -0.06
TUBB3-204ENST00000554116 UTYO14607 1347 aa14.65□□□□□ -0.06
TUBB3-204ENST00000554116 TCP10L2B9ZVM9 353 aa14.64□□□□□ -0.07
TUBB3-204ENST00000554116 ALDH1L1O75891 902 aa14.64□□□□□ -0.07
TUBB3-204ENST00000554116 LRRC24Q50LG9 513 aa14.64□□□□□ -0.07
TUBB3-204ENST00000554116 ANKRD44Q8N8A2 993 aa14.64□□□□□ -0.07
TUBB3-204ENST00000554116 ZNF333Q96JL9 665 aa14.64□□□□□ -0.07
TUBB3-204ENST00000554116 IQSEC3Q9UPP2 1182 aaPredicted RBP14.64□□□□□ -0.07
TUBB3-204ENST00000554116 CACNB3P54284 484 aa14.63□□□□□ -0.07
TUBB3-204ENST00000554116 RABL6Q3YEC7 729 aaPredicted RBP14.63□□□□□ -0.07
TUBB3-204ENST00000554116 COL6A3P12111 3177 aa14.63□□□□□ -0.07
TUBB3-204ENST00000554116 CCL15-CCL14A0A0B4J2E2 113 aa14.62□□□□□ -0.07
TUBB3-204ENST00000554116 MAP3K9P80192 1104 aa14.62□□□□□ -0.07
TUBB3-204ENST00000554116 CCL15Q16663 113 aa14.62□□□□□ -0.07
TUBB3-204ENST00000554116 TAF7LQ5H9L4 462 aa14.62□□□□□ -0.07
TUBB3-204ENST00000554116 OTUD7BQ6GQQ9 843 aa14.62□□□□□ -0.07
TUBB3-204ENST00000554116 APOBEC3HQ6NTF7 200 aaKnown RBP14.62□□□□□ -0.07
TUBB3-204ENST00000554116 ARHGAP39Q9C0H5 1083 aa14.62□□□□□ -0.07
TUBB3-204ENST00000554116 BICC1Q9H694 974 aaKnown RBP14.62□□□□□ -0.07
TUBB3-204ENST00000554116 C9orf78Q9NZ63 289 aaPredicted RBP14.62□□□□□ -0.07
TUBB3-204ENST00000554116 PTCH2Q9Y6C5 1203 aa14.62□□□□□ -0.07
TUBB3-204ENST00000554116 SNCAIPQ9Y6H5 919 aa14.62□□□□□ -0.07
TUBB3-204ENST00000554116 TNFAIP1Q13829 316 aa14.61□□□□□ -0.07
TUBB3-204ENST00000554116 SLC4A10Q6U841 1118 aa14.61□□□□□ -0.07
TUBB3-204ENST00000554116 KLHDC4Q8TBB5 520 aa14.61□□□□□ -0.07
TUBB3-204ENST00000554116 SRCIN1Q9C0H9 1055 aa14.61□□□□□ -0.07
TUBB3-204ENST00000554116 SPDYE5A6NIY4 337 aa14.6□□□□□ -0.07
TUBB3-204ENST00000554116 CTGFP29279 349 aa14.6□□□□□ -0.07
TUBB3-204ENST00000554116 BCAMP50895 628 aa14.6□□□□□ -0.07
TUBB3-204ENST00000554116 HDLBPQ00341 1268 aaKnown RBP14.6□□□□□ -0.07
TUBB3-204ENST00000554116 TAF1CQ15572 869 aaPredicted RBP14.6□□□□□ -0.07
TUBB3-204ENST00000554116 ZKSCAN4Q969J2 545 aaPredicted RBP14.6□□□□□ -0.07
TUBB3-204ENST00000554116 OTUD5Q96G74 571 aa14.6□□□□□ -0.07
TUBB3-204ENST00000554116 TMEM106CQ9BVX2 250 aa14.6□□□□□ -0.07
TUBB3-204ENST00000554116 BTBD19C9JJ37 291 aa14.59□□□□□ -0.07
TUBB3-204ENST00000554116 IRF6O14896 467 aa14.59□□□□□ -0.07
TUBB3-204ENST00000554116 FGFR2P21802 821 aa14.59□□□□□ -0.07
TUBB3-204ENST00000554116 GTF2A2P52657 109 aa14.59□□□□□ -0.07
TUBB3-204ENST00000554116 CHAF1AQ13111 956 aaPredicted RBP14.59□□□□□ -0.07
TUBB3-204ENST00000554116 ZDHHC15Q96MV8 337 aa14.59□□□□□ -0.07
TUBB3-204ENST00000554116 MRIQ9BWK5 157 aa14.59□□□□□ -0.07
TUBB3-204ENST00000554116 MROH5Q6ZUA9 1318 aa14.59□□□□□ -0.07
TUBB3-204ENST00000554116 ZNF521Q96K83 1311 aa14.59□□□□□ -0.07
TUBB3-204ENST00000554116 PDE8BO95263 885 aa14.58□□□□□ -0.08
TUBB3-204ENST00000554116 MOGSQ13724 837 aa14.58□□□□□ -0.08
TUBB3-204ENST00000554116 MRPL50Q8N5N7 158 aaKnown RBP14.58□□□□□ -0.08
TUBB3-204ENST00000554116 ZFYVE28Q9HCC9 887 aa14.58□□□□□ -0.08
TUBB3-204ENST00000554116 TLR2O60603 784 aa14.57□□□□□ -0.08
TUBB3-204ENST00000554116 RFX5P48382 616 aaPredicted RBP14.57□□□□□ -0.08
TUBB3-204ENST00000554116 ARHGEF6Q15052 776 aa14.57□□□□□ -0.08
TUBB3-204ENST00000554116 FKBP1CQ5VVH2 108 aa14.57□□□□□ -0.08
TUBB3-204ENST00000554116 FAM83AQ86UY5 434 aa14.57□□□□□ -0.08
TUBB3-204ENST00000554116 ERO1BQ86YB8 467 aa14.57□□□□□ -0.08
TUBB3-204ENST00000554116 SH3TC2Q8TF17 1288 aa14.57□□□□□ -0.08
TUBB3-204ENST00000554116 COLQQ9Y215 455 aaPredicted RBP14.57□□□□□ -0.08
TUBB3-204ENST00000554116 INPP5BP32019 993 aa14.56□□□□□ -0.08
TUBB3-204ENST00000554116 TNNI2P48788 182 aa14.56□□□□□ -0.08
TUBB3-204ENST00000554116 LACTBP83111 547 aaPredicted RBP14.56□□□□□ -0.08
TUBB3-204ENST00000554116 C17orf99Q6UX52 265 aa14.56□□□□□ -0.08
TUBB3-204ENST00000554116 NBPF11Q86T75 865 aa14.56□□□□□ -0.08
TUBB3-204ENST00000554116 TEKT1Q969V4 418 aa14.56□□□□□ -0.08
TUBB3-204ENST00000554116 WRNIP1Q96S55 665 aa14.56□□□□□ -0.08
TUBB3-204ENST00000554116 USP44Q9H0E7 712 aa14.56□□□□□ -0.08
TUBB3-204ENST00000554116 CSADQ9Y600 493 aa14.56□□□□□ -0.08
TUBB3-204ENST00000554116 ADGRA2Q96PE1 1338 aa14.56□□□□□ -0.08
TUBB3-204ENST00000554116 MYH13Q9UKX3 1938 aa14.56□□□□□ -0.08
TUBB3-204ENST00000554116 MYCP01106 439 aaPredicted RBP14.55□□□□□ -0.08
TUBB3-204ENST00000554116 PPIL2Q13356 520 aa14.55□□□□□ -0.08
TUBB3-204ENST00000554116 SLC9C1Q4G0N8 1177 aa14.55□□□□□ -0.08
TUBB3-204ENST00000554116 METTL24Q5JXM2 366 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms