RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 ZNF70Q9UC06 446 aaPredicted RBP9.81□□□□□ -0.84
ABCD4-220ENST00000553998 SERPINA10Q9UK55 444 aa9.81□□□□□ -0.84
ABCD4-220ENST00000553998 CACNA1FO60840 1977 aa9.81□□□□□ -0.84
ABCD4-220ENST00000553998 FANCIQ9NVI1 1328 aa9.81□□□□□ -0.84
ABCD4-220ENST00000553998 ANKRD18BA2A2Z9 1011 aa9.8□□□□□ -0.84
ABCD4-220ENST00000553998 F8W031 263 aaPredicted RBP9.8□□□□□ -0.84
ABCD4-220ENST00000553998 TAF5LO75529 589 aa9.8□□□□□ -0.84
ABCD4-220ENST00000553998 VGLL4Q14135 290 aa9.8□□□□□ -0.84
ABCD4-220ENST00000553998 CHRDL2Q6WN34 429 aa9.8□□□□□ -0.84
ABCD4-220ENST00000553998 TDRD7Q8NHU6 1098 aaKnown RBP9.8□□□□□ -0.84
ABCD4-220ENST00000553998 CNKSR2Q8WXI2 1034 aa9.8□□□□□ -0.84
ABCD4-220ENST00000553998 SHISA4Q96DD7 197 aa9.8□□□□□ -0.84
ABCD4-220ENST00000553998 SPINK5Q9NQ38 1064 aaPredicted RBP9.8□□□□□ -0.84
ABCD4-220ENST00000553998 TRIOBPQ9H2D6 2365 aa9.79□□□□□ -0.84
ABCD4-220ENST00000553998 COL6A3P12111 3177 aa9.79□□□□□ -0.84
ABCD4-220ENST00000553998 SPDYE5A6NIY4 337 aa9.79□□□□□ -0.84
ABCD4-220ENST00000553998 FOXO4P98177 505 aa9.79□□□□□ -0.84
ABCD4-220ENST00000553998 KIF22Q14807 665 aa9.79□□□□□ -0.84
ABCD4-220ENST00000553998 C17orf99Q6UX52 265 aa9.79□□□□□ -0.84
ABCD4-220ENST00000553998 G2E3Q7L622 706 aa9.79□□□□□ -0.84
ABCD4-220ENST00000553998 CDAN1Q8IWY9 1227 aa9.79□□□□□ -0.84
ABCD4-220ENST00000553998 TRMT2AQ8IZ69 625 aaKnown RBP9.79□□□□□ -0.84
ABCD4-220ENST00000553998 HELBQ8NG08 1087 aaPredicted RBP9.79□□□□□ -0.84
ABCD4-220ENST00000553998 LINS1Q8NG48 757 aa9.79□□□□□ -0.84
ABCD4-220ENST00000553998 NKX2-3Q8TAU0 364 aa9.79□□□□□ -0.84
ABCD4-220ENST00000553998 SH3TC2Q8TF17 1288 aa9.79□□□□□ -0.84
ABCD4-220ENST00000553998 TSR2Q969E8 191 aaKnown RBP9.79□□□□□ -0.84
ABCD4-220ENST00000553998 ARHGAP39Q9C0H5 1083 aa9.79□□□□□ -0.84
ABCD4-220ENST00000553998 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.79□□□□□ -0.84
ABCD4-220ENST00000553998 BTBD19C9JJ37 291 aa9.78□□□□□ -0.84
ABCD4-220ENST00000553998 WDHD1O75717 1129 aaPredicted RBP9.78□□□□□ -0.84
ABCD4-220ENST00000553998 SLC4A2P04920 1241 aa9.78□□□□□ -0.84
ABCD4-220ENST00000553998 CETPP11597 493 aa9.78□□□□□ -0.84
ABCD4-220ENST00000553998 GJA8P48165 433 aa9.78□□□□□ -0.84
ABCD4-220ENST00000553998 RBM5P52756 815 aaKnown RBP eCLIP9.78□□□□□ -0.842e-6■□□□□ 10.6
ABCD4-220ENST00000553998 HDLBPQ00341 1268 aaKnown RBP9.78□□□□□ -0.84
ABCD4-220ENST00000553998 ERO1BQ86YB8 467 aa9.78□□□□□ -0.84
ABCD4-220ENST00000553998 DZIP1LQ8IYY4 767 aaKnown RBP9.78□□□□□ -0.84
ABCD4-220ENST00000553998 MRIQ9BWK5 157 aa9.78□□□□□ -0.84
ABCD4-220ENST00000553998 STK31Q9BXU1 1019 aa9.78□□□□□ -0.84
ABCD4-220ENST00000553998 TDRD3Q9H7E2 651 aaKnown RBP9.78□□□□□ -0.84
ABCD4-220ENST00000553998 SNCAIPQ9Y6H5 919 aa9.78□□□□□ -0.84
ABCD4-220ENST00000553998 CEP290O15078 2479 aa9.78□□□□□ -0.84
ABCD4-220ENST00000553998 A0A1W2PPC1 479 aa9.77□□□□□ -0.85
ABCD4-220ENST00000553998 DLL1O00548 723 aa9.77□□□□□ -0.85
ABCD4-220ENST00000553998 GJB1P08034 283 aa9.77□□□□□ -0.85
ABCD4-220ENST00000553998 CT47B1P0C2W7 299 aaPredicted RBP9.77□□□□□ -0.85
ABCD4-220ENST00000553998 CAPN2P17655 700 aa9.77□□□□□ -0.85
ABCD4-220ENST00000553998 CTGFP29279 349 aa9.77□□□□□ -0.85
ABCD4-220ENST00000553998 TNNI2P48788 182 aa9.77□□□□□ -0.85
ABCD4-220ENST00000553998 IFIT5Q13325 482 aaKnown RBP9.77□□□□□ -0.85
ABCD4-220ENST00000553998 UBE4AQ14139 1066 aa9.77□□□□□ -0.85
ABCD4-220ENST00000553998 MTFR1Q15390 333 aa9.77□□□□□ -0.85
ABCD4-220ENST00000553998 TWISTNBQ3B726 338 aaPredicted RBP9.77□□□□□ -0.85
ABCD4-220ENST00000553998 MFSD14BQ5SR56 506 aa9.77□□□□□ -0.85
ABCD4-220ENST00000553998 CDCA7LQ96GN5 454 aa9.77□□□□□ -0.85
ABCD4-220ENST00000553998 TMEM39BQ9GZU3 492 aa9.77□□□□□ -0.85
ABCD4-220ENST00000553998 SRRDQ9UH36 339 aa9.77□□□□□ -0.85
ABCD4-220ENST00000553998 TTF2Q9UNY4 1162 aaKnown RBP9.77□□□□□ -0.85
ABCD4-220ENST00000553998 CSADQ9Y600 493 aa9.77□□□□□ -0.85
ABCD4-220ENST00000553998 IRF6O14896 467 aa9.76□□□□□ -0.85
ABCD4-220ENST00000553998 HOXD10P28358 340 aa9.76□□□□□ -0.85
ABCD4-220ENST00000553998 CRKP46108 304 aa9.76□□□□□ -0.85
ABCD4-220ENST00000553998 EXOSC9Q06265 439 aaKnown RBP9.76□□□□□ -0.85
ABCD4-220ENST00000553998 FLIIQ13045 1269 aa9.76□□□□□ -0.85
ABCD4-220ENST00000553998 PPIL2Q13356 520 aa9.76□□□□□ -0.85
ABCD4-220ENST00000553998 SNAPC2Q13487 334 aa9.76□□□□□ -0.85
ABCD4-220ENST00000553998 FKBP1CQ5VVH2 108 aa9.76□□□□□ -0.85
ABCD4-220ENST00000553998 SLC17A8Q8NDX2 589 aa9.76□□□□□ -0.85
ABCD4-220ENST00000553998 DNAAF4Q8WXU2 420 aa9.76□□□□□ -0.85
ABCD4-220ENST00000553998 DPF3Q92784 378 aa9.76□□□□□ -0.85
ABCD4-220ENST00000553998 FAM84BQ96KN1 310 aaPredicted RBP9.76□□□□□ -0.85
ABCD4-220ENST00000553998 HTATIP2Q9BUP3 242 aa9.76□□□□□ -0.85
ABCD4-220ENST00000553998 ADGRA2Q96PE1 1338 aa9.76□□□□□ -0.85
ABCD4-220ENST00000553998 TCP10L2B9ZVM9 353 aa9.75□□□□□ -0.85
ABCD4-220ENST00000553998 ZBTB7BO15156 539 aaPredicted RBP9.75□□□□□ -0.85
ABCD4-220ENST00000553998 VAMP4O75379 141 aa9.75□□□□□ -0.85
ABCD4-220ENST00000553998 MYCP01106 439 aaPredicted RBP9.75□□□□□ -0.85
ABCD4-220ENST00000553998 HIBADHP31937 336 aaKnown RBP9.75□□□□□ -0.85
ABCD4-220ENST00000553998 GRK4P32298 578 aa9.75□□□□□ -0.85
ABCD4-220ENST00000553998 PPATQ06203 517 aa9.75□□□□□ -0.85
ABCD4-220ENST00000553998 LDHAL6AQ6ZMR3 332 aa9.75□□□□□ -0.85
ABCD4-220ENST00000553998 ANKRD23Q86SG2 305 aa9.75□□□□□ -0.85
ABCD4-220ENST00000553998 FAM83AQ86UY5 434 aa9.75□□□□□ -0.85
ABCD4-220ENST00000553998 TRIM47Q96LD4 638 aa9.75□□□□□ -0.85
ABCD4-220ENST00000553998 JAG2Q9Y219 1238 aa9.75□□□□□ -0.85
ABCD4-220ENST00000553998 NR2E3Q9Y5X4 410 aa9.75□□□□□ -0.85
ABCD4-220ENST00000553998 CCL5P13501 91 aa9.74□□□□□ -0.85
ABCD4-220ENST00000553998 OSBPP22059 807 aa9.74□□□□□ -0.85
ABCD4-220ENST00000553998 PSMC4P43686 418 aa9.74□□□□□ -0.85
ABCD4-220ENST00000553998 MOGSQ13724 837 aa9.74□□□□□ -0.85
ABCD4-220ENST00000553998 BEND3Q5T5X7 828 aa9.74□□□□□ -0.85
ABCD4-220ENST00000553998 LMBR1LQ6UX01 489 aa9.74□□□□□ -0.85
ABCD4-220ENST00000553998 FBXO33Q7Z6M2 555 aa9.74□□□□□ -0.85
ABCD4-220ENST00000553998 ZKSCAN4Q969J2 545 aaPredicted RBP9.74□□□□□ -0.85
ABCD4-220ENST00000553998 HOOK2Q96ED9 719 aa9.74□□□□□ -0.85
ABCD4-220ENST00000553998 ZNF112Q9UJU3 913 aa9.74□□□□□ -0.85
ABCD4-220ENST00000553998 KCNH4Q9UQ05 1017 aa9.74□□□□□ -0.85
ABCD4-220ENST00000553998 RIPOR2Q9Y4F9 1068 aa9.74□□□□□ -0.85
ABCD4-220ENST00000553998 A0A1B0GUL6 1792 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms