RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 ADH5P11766 374 aa5.39□□□□□ -1.55
SRP54-204ENST00000553923 NPR3P17342 541 aa5.39□□□□□ -1.55
SRP54-204ENST00000553923 MPSTP25325 297 aa5.39□□□□□ -1.55
SRP54-204ENST00000553923 AGBL5Q8NDL9 886 aa5.39□□□□□ -1.55
SRP54-204ENST00000553923 KRTAP4-2Q9BYR5 136 aa5.39□□□□□ -1.55
SRP54-204ENST00000553923 GSX1Q9H4S2 264 aaPredicted RBP5.39□□□□□ -1.55
SRP54-204ENST00000553923 LATS2Q9NRM7 1088 aa5.39□□□□□ -1.55
SRP54-204ENST00000553923 POLIQ9UNA4 740 aa5.39□□□□□ -1.55
SRP54-204ENST00000553923 ACTL7BQ9Y614 415 aa5.39□□□□□ -1.55
SRP54-204ENST00000553923 METTL12A8MUP2 240 aa5.38□□□□□ -1.55
SRP54-204ENST00000553923 EDN3P14138 238 aa5.38□□□□□ -1.55
SRP54-204ENST00000553923 PCSK2P16519 638 aa5.38□□□□□ -1.55
SRP54-204ENST00000553923 GSTM4Q03013 218 aa5.38□□□□□ -1.55
SRP54-204ENST00000553923 ZNF423Q2M1K9 1284 aa5.38□□□□□ -1.55
SRP54-204ENST00000553923 FLCNQ8NFG4 579 aa5.38□□□□□ -1.55
SRP54-204ENST00000553923 ASAP3Q8TDY4 903 aa5.38□□□□□ -1.55
SRP54-204ENST00000553923 SEMA6CQ9H3T2 930 aa5.38□□□□□ -1.55
SRP54-204ENST00000553923 ACSS3Q9H6R3 686 aa5.38□□□□□ -1.55
SRP54-204ENST00000553923 C1GALT1Q9NS00 363 aa5.38□□□□□ -1.55
SRP54-204ENST00000553923 FOXD3Q9UJU5 478 aaPredicted RBP5.38□□□□□ -1.55
SRP54-204ENST00000553923 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.38□□□□□ -1.55
SRP54-204ENST00000553923 CARMIL2Q6F5E8 1435 aa5.38□□□□□ -1.55
SRP54-204ENST00000553923 NFICP08651 508 aa5.37□□□□□ -1.55
SRP54-204ENST00000553923 ZNF765Q7L2R6 523 aa5.37□□□□□ -1.55
SRP54-204ENST00000553923 SNX29Q8TEQ0 813 aa5.37□□□□□ -1.55
SRP54-204ENST00000553923 BCL7CQ8WUZ0 217 aaPredicted RBP5.37□□□□□ -1.55
SRP54-204ENST00000553923 PHACTR2O75167 634 aa5.36□□□□□ -1.55
SRP54-204ENST00000553923 SPRED2Q7Z698 418 aa5.36□□□□□ -1.55
SRP54-204ENST00000553923 YIPF2Q9BWQ6 316 aa5.36□□□□□ -1.55
SRP54-204ENST00000553923 ZFYVE28Q9HCC9 887 aa5.36□□□□□ -1.55
SRP54-204ENST00000553923 FAM105AQ9NUU6 356 aa5.36□□□□□ -1.55
SRP54-204ENST00000553923 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.35□□□□□ -1.55
SRP54-204ENST00000553923 EIF4EBP3O60516 100 aaPredicted RBP5.35□□□□□ -1.55
SRP54-204ENST00000553923 ECEL1O95672 775 aa5.35□□□□□ -1.55
SRP54-204ENST00000553923 MAOBP27338 520 aa5.35□□□□□ -1.55
SRP54-204ENST00000553923 MAP7Q14244 749 aa5.35□□□□□ -1.55
SRP54-204ENST00000553923 DUSP27Q5VZP5 1158 aa5.35□□□□□ -1.55
SRP54-204ENST00000553923 OGFOD3Q6PK18 319 aa5.35□□□□□ -1.55
SRP54-204ENST00000553923 ZNF574Q6ZN55 896 aaPredicted RBP5.35□□□□□ -1.55
SRP54-204ENST00000553923 GTF3C2Q8WUA4 911 aaPredicted RBP5.35□□□□□ -1.55
SRP54-204ENST00000553923 PBXIP1Q96AQ6 731 aa5.35□□□□□ -1.55
SRP54-204ENST00000553923 TCF12Q99081 682 aa5.35□□□□□ -1.55
SRP54-204ENST00000553923 AMOTL2Q9Y2J4 779 aa5.35□□□□□ -1.55
SRP54-204ENST00000553923 A0A096LPE4 126 aa5.34□□□□□ -1.55
SRP54-204ENST00000553923 A0A1W2PPZ6 126 aa5.34□□□□□ -1.55
SRP54-204ENST00000553923 DYNC1LI2O43237 492 aaPredicted RBP5.34□□□□□ -1.55
SRP54-204ENST00000553923 FZD6O60353 706 aa5.34□□□□□ -1.55
SRP54-204ENST00000553923 GRIA4P48058 902 aa5.34□□□□□ -1.55
SRP54-204ENST00000553923 CYP27A1Q02318 531 aa5.34□□□□□ -1.55
SRP54-204ENST00000553923 PCDH1Q08174 1060 aa5.34□□□□□ -1.55
SRP54-204ENST00000553923 EHHADHQ08426 723 aa5.34□□□□□ -1.55
SRP54-204ENST00000553923 MTMR3Q13615 1198 aa5.34□□□□□ -1.55
SRP54-204ENST00000553923 ALKBH2Q6NS38 261 aa5.34□□□□□ -1.55
SRP54-204ENST00000553923 CCNJLQ8IV13 435 aa5.34□□□□□ -1.55
SRP54-204ENST00000553923 TTC16Q8NEE8 873 aa5.34□□□□□ -1.55
SRP54-204ENST00000553923 TRIM56Q9BRZ2 755 aaKnown RBP5.34□□□□□ -1.55
SRP54-204ENST00000553923 LRRC4CQ9HCJ2 640 aa5.34□□□□□ -1.55
SRP54-204ENST00000553923 A0A1W2PP55 124 aa5.33□□□□□ -1.56
SRP54-204ENST00000553923 RAB6AP20340 208 aa5.33□□□□□ -1.56
SRP54-204ENST00000553923 POU4F3Q15319 338 aa5.33□□□□□ -1.56
SRP54-204ENST00000553923 SPRED3Q2MJR0 410 aa5.33□□□□□ -1.56
SRP54-204ENST00000553923 ZNF792Q3KQV3 632 aa5.33□□□□□ -1.56
SRP54-204ENST00000553923 ZNF648Q5T619 568 aaPredicted RBP5.33□□□□□ -1.56
SRP54-204ENST00000553923 DYMQ7RTS9 669 aa5.33□□□□□ -1.56
SRP54-204ENST00000553923 GJD3Q8N144 294 aa5.33□□□□□ -1.56
SRP54-204ENST00000553923 CLEC4MQ9H2X3 399 aaPredicted RBP5.33□□□□□ -1.56
SRP54-204ENST00000553923 SLC5A6Q9Y289 635 aa5.33□□□□□ -1.56
SRP54-204ENST00000553923 SYNGAP1Q96PV0 1343 aa5.32□□□□□ -1.56
SRP54-204ENST00000553923 CYP11A1P05108 521 aa5.32□□□□□ -1.56
SRP54-204ENST00000553923 SSFA2P28290 1259 aa5.32□□□□□ -1.56
SRP54-204ENST00000553923 BNIP3Q12983 259 aa5.32□□□□□ -1.56
SRP54-204ENST00000553923 SPOCD1Q6ZMY3 1216 aa5.32□□□□□ -1.56
SRP54-204ENST00000553923 GLIS3Q8NEA6 775 aa5.32□□□□□ -1.56
SRP54-204ENST00000553923 DBX1A6NMT0 343 aa5.31□□□□□ -1.56
SRP54-204ENST00000553923 AOC2O75106 756 aa5.31□□□□□ -1.56
SRP54-204ENST00000553923 B3GALT4O96024 378 aa5.31□□□□□ -1.56
SRP54-204ENST00000553923 POLR3DP05423 398 aaPredicted RBP5.31□□□□□ -1.56
SRP54-204ENST00000553923 ASPAP45381 313 aa5.31□□□□□ -1.56
SRP54-204ENST00000553923 USP5P45974 858 aa5.31□□□□□ -1.56
SRP54-204ENST00000553923 ZNF124Q15973 351 aa5.31□□□□□ -1.56
SRP54-204ENST00000553923 FBLN7Q53RD9 439 aa5.31□□□□□ -1.56
SRP54-204ENST00000553923 AKAP4Q5JQC9 854 aa5.31□□□□□ -1.56
SRP54-204ENST00000553923 ATG4DQ86TL0 474 aaPredicted RBP5.31□□□□□ -1.56
SRP54-204ENST00000553923 GALNT12Q8IXK2 581 aa5.31□□□□□ -1.56
SRP54-204ENST00000553923 CCDC87Q9NVE4 849 aa5.31□□□□□ -1.56
SRP54-204ENST00000553923 PPP1R9AQ9ULJ8 1098 aa5.31□□□□□ -1.56
SRP54-204ENST00000553923 TMEM88BA6NKF7 163 aa5.3□□□□□ -1.56
SRP54-204ENST00000553923 KRTAP9-7A8MTY7 169 aa5.3□□□□□ -1.56
SRP54-204ENST00000553923 CD8BP10966 210 aa5.3□□□□□ -1.56
SRP54-204ENST00000553923 FUT4P22083 530 aa5.3□□□□□ -1.56
SRP54-204ENST00000553923 PLCL1Q15111 1095 aa5.3□□□□□ -1.56
SRP54-204ENST00000553923 STK11IPQ8N1F8 1099 aa5.3□□□□□ -1.56
SRP54-204ENST00000553923 MISP3Q96FF7 219 aa5.3□□□□□ -1.56
SRP54-204ENST00000553923 WDR18Q9BV38 432 aa5.3□□□□□ -1.56
SRP54-204ENST00000553923 LIN7BQ9HAP6 207 aa5.3□□□□□ -1.56
SRP54-204ENST00000553923 MBNL3Q9NUK0 354 aaKnown RBP5.3□□□□□ -1.56
SRP54-204ENST00000553923 ADAMTS6Q9UKP5 1117 aa5.3□□□□□ -1.56
SRP54-204ENST00000553923 U3KQE9 123 aa5.3□□□□□ -1.56
SRP54-204ENST00000553923 FAM13AO94988 1023 aa5.29□□□□□ -1.56
SRP54-204ENST00000553923 RNASE1P07998 156 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 212.7 ms