RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 RTKN2Q8IZC4 609 aa16.84■□□□□ 0.29
ABCD4-219ENST00000553745 SUPT20HQ8NEM7 779 aa16.84■□□□□ 0.29
ABCD4-219ENST00000553745 PUS7LQ9H0K6 701 aaKnown RBP16.84■□□□□ 0.29
ABCD4-219ENST00000553745 RAI14Q9P0K7 980 aa16.84■□□□□ 0.29
ABCD4-219ENST00000553745 HSP90AA1P07900 732 aaKnown RBP16.84■□□□□ 0.29
ABCD4-219ENST00000553745 SOGA3Q5TF21 947 aa16.84■□□□□ 0.29
ABCD4-219ENST00000553745 KIAA1211Q6ZU35 1233 aa16.84■□□□□ 0.29
ABCD4-219ENST00000553745 WDR66Q8TBY9 1149 aa16.84■□□□□ 0.29
ABCD4-219ENST00000553745 PSMD1Q99460 953 aa16.84■□□□□ 0.29
ABCD4-219ENST00000553745 DBNDD1Q9H9R9 158 aa16.84■□□□□ 0.29
ABCD4-219ENST00000553745 FOXD4L1Q9NU39 408 aa16.84■□□□□ 0.29
ABCD4-219ENST00000553745 COL4A5P29400 1685 aa16.84■□□□□ 0.29
ABCD4-219ENST00000553745 MYH2Q9UKX2 1941 aa16.83■□□□□ 0.29
ABCD4-219ENST00000553745 ST18O60284 1047 aa16.83■□□□□ 0.28
ABCD4-219ENST00000553745 ANAPC15P60006 121 aa16.83■□□□□ 0.28
ABCD4-219ENST00000553745 KIAA2012Q0VF49 1180 aa16.83■□□□□ 0.28
ABCD4-219ENST00000553745 FHDC1Q9C0D6 1143 aaPredicted RBP16.83■□□□□ 0.28
ABCD4-219ENST00000553745 BCS1LQ9Y276 419 aa16.83■□□□□ 0.28
ABCD4-219ENST00000553745 DDX11L8A8MPP1 907 aa16.82■□□□□ 0.28
ABCD4-219ENST00000553745 G3V3G9 751 aa16.82■□□□□ 0.28
ABCD4-219ENST00000553745 DCAF8Q5TAQ9 597 aa16.82■□□□□ 0.28
ABCD4-219ENST00000553745 CLEC17AQ6ZS10 378 aa16.82■□□□□ 0.28
ABCD4-219ENST00000553745 ZNF384Q8TF68 577 aa16.82■□□□□ 0.28
ABCD4-219ENST00000553745 SRCAPQ6ZRS2 3230 aa16.82■□□□□ 0.28
ABCD4-219ENST00000553745 FAM205AQ6ZU69 1335 aa16.82■□□□□ 0.28
ABCD4-219ENST00000553745 PPIP5K2O43314 1243 aa16.82■□□□□ 0.28
ABCD4-219ENST00000553745 ECE2O60344 883 aa16.82■□□□□ 0.28
ABCD4-219ENST00000553745 GTF2IP78347 998 aa16.82■□□□□ 0.28
ABCD4-219ENST00000553745 VPS53Q5VIR6 699 aa16.82■□□□□ 0.28
ABCD4-219ENST00000553745 ADGRA1Q86SQ6 560 aa16.82■□□□□ 0.28
ABCD4-219ENST00000553745 ZGPATQ8N5A5 531 aaKnown RBP16.82■□□□□ 0.28
ABCD4-219ENST00000553745 NSUN4Q96CB9 384 aaKnown RBP16.82■□□□□ 0.28
ABCD4-219ENST00000553745 GPAA1O43292 621 aa16.81■□□□□ 0.28
ABCD4-219ENST00000553745 MECOMQ03112 1051 aa16.81■□□□□ 0.28
ABCD4-219ENST00000553745 GRIK5Q16478 980 aa16.81■□□□□ 0.28
ABCD4-219ENST00000553745 FBXW7Q969H0 707 aa16.81■□□□□ 0.28
ABCD4-219ENST00000553745 ZNF277Q9NRM2 450 aaPredicted RBP16.81■□□□□ 0.28
ABCD4-219ENST00000553745 PALD1Q9ULE6 856 aa16.81■□□□□ 0.28
ABCD4-219ENST00000553745 ADAMTSL1Q8N6G6 1762 aa16.81■□□□□ 0.28
ABCD4-219ENST00000553745 TRAK2O60296 914 aa16.8■□□□□ 0.28
ABCD4-219ENST00000553745 CYP7A1P22680 504 aa16.8■□□□□ 0.28
ABCD4-219ENST00000553745 MCCP23508 829 aa16.8■□□□□ 0.28
ABCD4-219ENST00000553745 MFSD14BQ5SR56 506 aa16.8■□□□□ 0.28
ABCD4-219ENST00000553745 NAA16Q6N069 864 aaPredicted RBP16.8■□□□□ 0.28
ABCD4-219ENST00000553745 PODNQ7Z5L7 613 aa16.8■□□□□ 0.28
ABCD4-219ENST00000553745 DZIP1Q86YF9 867 aaKnown RBP16.8■□□□□ 0.28
ABCD4-219ENST00000553745 LAMA4Q16363 1823 aa16.8■□□□□ 0.28
ABCD4-219ENST00000553745 LDHBP07195 334 aaKnown RBP16.79■□□□□ 0.28
ABCD4-219ENST00000553745 HSPA4P34932 840 aa16.79■□□□□ 0.28
ABCD4-219ENST00000553745 SPTY2D1Q68D10 685 aaPredicted RBP16.79■□□□□ 0.28
ABCD4-219ENST00000553745 MAP4K1Q92918 833 aa16.79■□□□□ 0.28
ABCD4-219ENST00000553745 GBP4Q96PP9 640 aa16.79■□□□□ 0.28
ABCD4-219ENST00000553745 CWC22Q9HCG8 908 aaKnown RBP16.79■□□□□ 0.28
ABCD4-219ENST00000553745 RBM8AQ9Y5S9 174 aaKnown RBP16.79■□□□□ 0.28
ABCD4-219ENST00000553745 NFKBIEO00221 500 aa16.79■□□□□ 0.28
ABCD4-219ENST00000553745 FOXP2O15409 715 aa16.79■□□□□ 0.28
ABCD4-219ENST00000553745 MBD4O95243 580 aa16.79■□□□□ 0.28
ABCD4-219ENST00000553745 MIGA1Q8NAN2 632 aa16.79■□□□□ 0.28
ABCD4-219ENST00000553745 TBC1D22AQ8WUA7 517 aa16.79■□□□□ 0.28
ABCD4-219ENST00000553745 AIDAQ96BJ3 306 aa16.79■□□□□ 0.28
ABCD4-219ENST00000553745 TAOK3Q9H2K8 898 aa16.79■□□□□ 0.28
ABCD4-219ENST00000553745 KCNQ5Q9NR82 932 aa16.79■□□□□ 0.28
ABCD4-219ENST00000553745 HSPD1P10809 573 aaKnown RBP16.78■□□□□ 0.28
ABCD4-219ENST00000553745 TTLL5Q6EMB2 1281 aa16.78■□□□□ 0.28
ABCD4-219ENST00000553745 LCORLQ8N3X6 602 aa16.78■□□□□ 0.28
ABCD4-219ENST00000553745 CDK5RAP2Q96SN8 1893 aa16.78■□□□□ 0.28
ABCD4-219ENST00000553745 YDJCA8MPS7 323 aa16.77■□□□□ 0.28
ABCD4-219ENST00000553745 MCM2P49736 904 aa16.77■□□□□ 0.28
ABCD4-219ENST00000553745 NEK4P51957 841 aa16.77■□□□□ 0.28
ABCD4-219ENST00000553745 LARGE2Q8N3Y3 721 aa16.77■□□□□ 0.28
ABCD4-219ENST00000553745 CERS5Q8N5B7 392 aa16.77■□□□□ 0.28
ABCD4-219ENST00000553745 IL27Q8NEV9 243 aa16.77■□□□□ 0.28
ABCD4-219ENST00000553745 DSCC1Q9BVC3 393 aa16.77■□□□□ 0.28
ABCD4-219ENST00000553745 MXD3Q9BW11 206 aa16.77■□□□□ 0.28
ABCD4-219ENST00000553745 ARMT1Q9H993 441 aa16.77■□□□□ 0.28
ABCD4-219ENST00000553745 UTRNP46939 3433 aa16.77■□□□□ 0.27
ABCD4-219ENST00000553745 IARSP41252 1262 aaKnown RBP16.77■□□□□ 0.27
ABCD4-219ENST00000553745 NUCB2P80303 420 aa16.76■□□□□ 0.27
ABCD4-219ENST00000553745 RASSF7Q02833 373 aa16.76■□□□□ 0.27
ABCD4-219ENST00000553745 NECTIN1Q15223 517 aa16.76■□□□□ 0.27
ABCD4-219ENST00000553745 DIXDC1Q155Q3 683 aa16.76■□□□□ 0.27
ABCD4-219ENST00000553745 STRBPQ96SI9 672 aaKnown RBP16.76■□□□□ 0.27
ABCD4-219ENST00000553745 SYT17Q9BSW7 474 aa16.76■□□□□ 0.27
ABCD4-219ENST00000553745 BAZ2AQ9UIF9 1905 aaKnown RBP16.76■□□□□ 0.27
ABCD4-219ENST00000553745 MAGEB6P1A0A0J9YX57 407 aa16.75■□□□□ 0.27
ABCD4-219ENST00000553745 IGSF3O75054 1194 aa16.75■□□□□ 0.27
ABCD4-219ENST00000553745 PTMSP20962 102 aa16.75■□□□□ 0.27
ABCD4-219ENST00000553745 CUL4AQ13619 759 aa16.75■□□□□ 0.27
ABCD4-219ENST00000553745 STRIP1Q5VSL9 837 aa16.75■□□□□ 0.27
ABCD4-219ENST00000553745 CREB3L3Q68CJ9 461 aa16.75■□□□□ 0.27
ABCD4-219ENST00000553745 RIOK1Q9BRS2 568 aaKnown RBP16.75■□□□□ 0.27
ABCD4-219ENST00000553745 VPS33BQ9H267 617 aa16.75■□□□□ 0.27
ABCD4-219ENST00000553745 U3KPZ7 1027 aaPredicted RBP16.75■□□□□ 0.27
ABCD4-219ENST00000553745 NAV1Q8NEY1 1877 aa16.74■□□□□ 0.27
ABCD4-219ENST00000553745 SLC27A2O14975 620 aa16.74■□□□□ 0.27
ABCD4-219ENST00000553745 DYNLL1P63167 89 aaKnown RBP16.74■□□□□ 0.27
ABCD4-219ENST00000553745 DACT2Q5SW24 774 aa16.74■□□□□ 0.27
ABCD4-219ENST00000553745 TMED8Q6PL24 325 aaPredicted RBP16.74■□□□□ 0.27
ABCD4-219ENST00000553745 RASEFQ8IZ41 740 aa16.74■□□□□ 0.27
ABCD4-219ENST00000553745 AATFQ9NY61 560 aaKnown RBP eCLIP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms