RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 C2CD5Q86YS7 1000 aa7.73□□□□□ -1.17
SMARCE1P3-201ENST00000553649 LRRN4Q8WUT4 740 aa7.73□□□□□ -1.17
SMARCE1P3-201ENST00000553649 ZNF837Q96EG3 531 aaPredicted RBP7.73□□□□□ -1.17
SMARCE1P3-201ENST00000553649 TAOK3Q9H2K8 898 aa7.73□□□□□ -1.17
SMARCE1P3-201ENST00000553649 FKBPLQ9UIM3 349 aa7.73□□□□□ -1.17
SMARCE1P3-201ENST00000553649 KIF24Q5T7B8 1368 aa7.72□□□□□ -1.17
SMARCE1P3-201ENST00000553649 CARMIL3Q8ND23 1372 aa7.72□□□□□ -1.17
SMARCE1P3-201ENST00000553649 COL5A3P25940 1745 aaPredicted RBP7.72□□□□□ -1.17
SMARCE1P3-201ENST00000553649 FYB1O15117 783 aa7.72□□□□□ -1.17
SMARCE1P3-201ENST00000553649 ADH1AP07327 375 aa7.72□□□□□ -1.17
SMARCE1P3-201ENST00000553649 CTU1Q7Z7A3 348 aaKnown RBP7.72□□□□□ -1.17
SMARCE1P3-201ENST00000553649 TESK2Q96S53 571 aa7.72□□□□□ -1.17
SMARCE1P3-201ENST00000553649 CDV3Q9UKY7 258 aaKnown RBP7.72□□□□□ -1.17
SMARCE1P3-201ENST00000553649 SCN4AP35499 1836 aa7.72□□□□□ -1.17
SMARCE1P3-201ENST00000553649 RNF123Q5XPI4 1314 aa7.72□□□□□ -1.17
SMARCE1P3-201ENST00000553649 NRXN2Q9P2S2 1712 aa7.72□□□□□ -1.17
SMARCE1P3-201ENST00000553649 DLEC1Q9Y238 1755 aa7.71□□□□□ -1.17
SMARCE1P3-201ENST00000553649 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.71□□□□□ -1.18
SMARCE1P3-201ENST00000553649 RHOQP17081 205 aa7.71□□□□□ -1.18
SMARCE1P3-201ENST00000553649 PTGIRP43119 386 aa7.71□□□□□ -1.18
SMARCE1P3-201ENST00000553649 ACDQ96AP0 544 aa7.71□□□□□ -1.18
SMARCE1P3-201ENST00000553649 HHIPL1Q96JK4 782 aa7.71□□□□□ -1.18
SMARCE1P3-201ENST00000553649 PUS7Q96PZ0 661 aaKnown RBP7.71□□□□□ -1.18
SMARCE1P3-201ENST00000553649 ENAMQ9NRM1 1142 aa7.71□□□□□ -1.18
SMARCE1P3-201ENST00000553649 MBIPQ9NS73 344 aa7.71□□□□□ -1.18
SMARCE1P3-201ENST00000553649 TMOD3Q9NYL9 352 aa7.71□□□□□ -1.18
SMARCE1P3-201ENST00000553649 MKI67P46013 3256 aaKnown RBP7.7□□□□□ -1.18
SMARCE1P3-201ENST00000553649 PHF20L1A8MW92 1017 aa7.7□□□□□ -1.18
SMARCE1P3-201ENST00000553649 DBN1Q16643 649 aa7.7□□□□□ -1.18
SMARCE1P3-201ENST00000553649 LYSMD3Q7Z3D4 306 aa7.7□□□□□ -1.18
SMARCE1P3-201ENST00000553649 PRICKLE2Q7Z3G6 844 aa7.7□□□□□ -1.18
SMARCE1P3-201ENST00000553649 ZBTB33Q86T24 672 aa7.7□□□□□ -1.18
SMARCE1P3-201ENST00000553649 BEND7Q8N7W2 519 aaPredicted RBP7.7□□□□□ -1.18
SMARCE1P3-201ENST00000553649 SAGE1Q9NXZ1 904 aa7.7□□□□□ -1.18
SMARCE1P3-201ENST00000553649 FLT4P35916 1363 aa7.7□□□□□ -1.18
SMARCE1P3-201ENST00000553649 H0YIN7 160 aa7.69□□□□□ -1.18
SMARCE1P3-201ENST00000553649 ERVH48-1M5A8F1 160 aa7.69□□□□□ -1.18
SMARCE1P3-201ENST00000553649 BCRP11274 1271 aa7.69□□□□□ -1.18
SMARCE1P3-201ENST00000553649 CLK2P49760 499 aaKnown RBP7.69□□□□□ -1.18
SMARCE1P3-201ENST00000553649 RAB15P59190 212 aa7.69□□□□□ -1.18
SMARCE1P3-201ENST00000553649 PDE4DQ08499 809 aa7.69□□□□□ -1.18
SMARCE1P3-201ENST00000553649 NFIXQ14938 502 aa7.69□□□□□ -1.18
SMARCE1P3-201ENST00000553649 NR6A1Q15406 480 aa7.69□□□□□ -1.18
SMARCE1P3-201ENST00000553649 ADAM32Q8TC27 787 aa7.69□□□□□ -1.18
SMARCE1P3-201ENST00000553649 KRTAP9-2Q9BYQ4 174 aa7.69□□□□□ -1.18
SMARCE1P3-201ENST00000553649 SPG7Q9UQ90 795 aa7.69□□□□□ -1.18
SMARCE1P3-201ENST00000553649 CCDC88AQ3V6T2 1871 aa7.68□□□□□ -1.18
SMARCE1P3-201ENST00000553649 DICER1Q9UPY3 1922 aaKnown RBP7.68□□□□□ -1.18
SMARCE1P3-201ENST00000553649 MYH14Q7Z406 1995 aaKnown RBP7.68□□□□□ -1.18
SMARCE1P3-201ENST00000553649 SERPINB2P05120 415 aa7.68□□□□□ -1.18
SMARCE1P3-201ENST00000553649 NOGQ13253 232 aa7.68□□□□□ -1.18
SMARCE1P3-201ENST00000553649 USPL1Q5W0Q7 1092 aa7.68□□□□□ -1.18
SMARCE1P3-201ENST00000553649 TRIM22Q8IYM9 498 aa7.68□□□□□ -1.18
SMARCE1P3-201ENST00000553649 PSMG3-AS1Q96PY0 264 aa7.68□□□□□ -1.18
SMARCE1P3-201ENST00000553649 POLR3EQ9NVU0 708 aa7.68□□□□□ -1.18
SMARCE1P3-201ENST00000553649 RNF186Q9NXI6 227 aa7.68□□□□□ -1.18
SMARCE1P3-201ENST00000553649 FER1L6Q2WGJ9 1857 aa7.68□□□□□ -1.18
SMARCE1P3-201ENST00000553649 TRPA1O75762 1119 aa7.67□□□□□ -1.18
SMARCE1P3-201ENST00000553649 CELF2O95319 508 aaKnown RBP7.67□□□□□ -1.18
SMARCE1P3-201ENST00000553649 PHKG2P15735 406 aa7.67□□□□□ -1.18
SMARCE1P3-201ENST00000553649 TNNT2P45379 298 aaPredicted RBP7.67□□□□□ -1.18
SMARCE1P3-201ENST00000553649 CRKLP46109 303 aaKnown RBP7.67□□□□□ -1.18
SMARCE1P3-201ENST00000553649 AKAP4Q5JQC9 854 aa7.67□□□□□ -1.18
SMARCE1P3-201ENST00000553649 ZNF622Q969S3 477 aaKnown RBP eCLIP7.67□□□□□ -1.18
SMARCE1P3-201ENST00000553649 POLR3GLQ9BT43 218 aa7.67□□□□□ -1.18
SMARCE1P3-201ENST00000553649 COL6A3P12111 3177 aa7.67□□□□□ -1.18
SMARCE1P3-201ENST00000553649 KRTAP9-6A0A140TA67 174 aa7.66□□□□□ -1.18
SMARCE1P3-201ENST00000553649 KRBA1A5PL33 1030 aa7.66□□□□□ -1.18
SMARCE1P3-201ENST00000553649 FAM155AB1AL88 458 aaPredicted RBP7.66□□□□□ -1.18
SMARCE1P3-201ENST00000553649 RNF144AP50876 292 aaPredicted RBP7.66□□□□□ -1.18
SMARCE1P3-201ENST00000553649 PKN2Q16513 984 aaKnown RBP7.66□□□□□ -1.18
SMARCE1P3-201ENST00000553649 IFNL2Q8IZJ0 200 aa7.66□□□□□ -1.18
SMARCE1P3-201ENST00000553649 NEDD1Q8NHV4 660 aa7.66□□□□□ -1.18
SMARCE1P3-201ENST00000553649 GTF3C3Q9Y5Q9 886 aa7.66□□□□□ -1.18
SMARCE1P3-201ENST00000553649 ERVV-2B6SEH9 535 aa7.65□□□□□ -1.18
SMARCE1P3-201ENST00000553649 K7ELQ4 463 aaPredicted RBP7.65□□□□□ -1.18
SMARCE1P3-201ENST00000553649 FZD9O00144 591 aa7.65□□□□□ -1.18
SMARCE1P3-201ENST00000553649 SNRPNP63162 240 aaKnown RBP7.65□□□□□ -1.18
SMARCE1P3-201ENST00000553649 KIF23Q02241 960 aaPredicted RBP7.65□□□□□ -1.18
SMARCE1P3-201ENST00000553649 PTK2Q05397 1052 aa7.65□□□□□ -1.18
SMARCE1P3-201ENST00000553649 INTS5Q6P9B9 1019 aaKnown RBP7.65□□□□□ -1.18
SMARCE1P3-201ENST00000553649 BICDL1Q6ZP65 573 aa7.65□□□□□ -1.18
SMARCE1P3-201ENST00000553649 GPC2Q8N158 579 aa7.65□□□□□ -1.18
SMARCE1P3-201ENST00000553649 Q8N3U1 123 aa7.65□□□□□ -1.18
SMARCE1P3-201ENST00000553649 EPS8L1Q8TE68 723 aa7.65□□□□□ -1.18
SMARCE1P3-201ENST00000553649 C7orf43Q8WVR3 580 aa7.65□□□□□ -1.18
SMARCE1P3-201ENST00000553649 GTPBP3Q969Y2 492 aaKnown RBP7.65□□□□□ -1.18
SMARCE1P3-201ENST00000553649 ZNF277Q9NRM2 450 aaPredicted RBP7.65□□□□□ -1.18
SMARCE1P3-201ENST00000553649 TIMELESSQ9UNS1 1208 aa7.65□□□□□ -1.18
SMARCE1P3-201ENST00000553649 SOS1Q07889 1333 aaPredicted RBP7.64□□□□□ -1.19
SMARCE1P3-201ENST00000553649 ESPNB1AK53 854 aa7.64□□□□□ -1.19
SMARCE1P3-201ENST00000553649 EPS15P42566 896 aa7.64□□□□□ -1.19
SMARCE1P3-201ENST00000553649 SCNN1DP51172 638 aa7.64□□□□□ -1.19
SMARCE1P3-201ENST00000553649 CDCA8Q53HL2 280 aa7.64□□□□□ -1.19
SMARCE1P3-201ENST00000553649 PRPF40BQ6NWY9 871 aaKnown RBP7.64□□□□□ -1.19
SMARCE1P3-201ENST00000553649 SYNE4Q8N205 404 aa7.64□□□□□ -1.19
SMARCE1P3-201ENST00000553649 GALNT6Q8NCL4 622 aa7.64□□□□□ -1.19
SMARCE1P3-201ENST00000553649 TRIOBPQ9H2D6 2365 aa7.64□□□□□ -1.19
SMARCE1P3-201ENST00000553649 PTCD1O75127 700 aaKnown RBP7.63□□□□□ -1.19
SMARCE1P3-201ENST00000553649 SOGA3Q5TF21 947 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms