RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 MYH14Q7Z406 1995 aaKnown RBP7.27□□□□□ -1.25
VIPAS39-204ENST00000553576 MYH7P12883 1935 aa7.27□□□□□ -1.25
VIPAS39-204ENST00000553576 TCHHQ07283 1943 aa7.27□□□□□ -1.25
VIPAS39-204ENST00000553576 SPATA31A5Q5VU36 1347 aa7.27□□□□□ -1.25
VIPAS39-204ENST00000553576 MAP3K15Q6ZN16 1313 aa7.27□□□□□ -1.25
VIPAS39-204ENST00000553576 SPATA31A7Q8IWB4 1347 aa7.27□□□□□ -1.25
VIPAS39-204ENST00000553576 CDHR2Q9BYE9 1310 aa7.27□□□□□ -1.25
VIPAS39-204ENST00000553576 CYP2E1P05181 493 aaPredicted RBP7.26□□□□□ -1.25
VIPAS39-204ENST00000553576 IL6STP40189 918 aaPredicted RBP7.26□□□□□ -1.25
VIPAS39-204ENST00000553576 IL15P40933 162 aaPredicted RBP7.26□□□□□ -1.25
VIPAS39-204ENST00000553576 NUCB2P80303 420 aa7.26□□□□□ -1.25
VIPAS39-204ENST00000553576 TSGA10IPQ3SY00 556 aa7.26□□□□□ -1.25
VIPAS39-204ENST00000553576 TNNI3KQ59H18 835 aa7.26□□□□□ -1.25
VIPAS39-204ENST00000553576 PTCRAQ6ISU1 281 aaPredicted RBP7.26□□□□□ -1.25
VIPAS39-204ENST00000553576 KIAA1211Q6ZU35 1233 aa7.26□□□□□ -1.25
VIPAS39-204ENST00000553576 ATG9AQ7Z3C6 839 aa7.26□□□□□ -1.25
VIPAS39-204ENST00000553576 ZBTB38Q8NAP3 1195 aaPredicted RBP7.26□□□□□ -1.25
VIPAS39-204ENST00000553576 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.26□□□□□ -1.25
VIPAS39-204ENST00000553576 SLC4A9Q96Q91 983 aa7.26□□□□□ -1.25
VIPAS39-204ENST00000553576 TM6SF1Q9BZW5 370 aa7.26□□□□□ -1.25
VIPAS39-204ENST00000553576 CCDC8Q9H0W5 538 aaPredicted RBP7.26□□□□□ -1.25
VIPAS39-204ENST00000553576 BCL11AQ9H165 835 aa7.26□□□□□ -1.25
VIPAS39-204ENST00000553576 IL25Q9H293 177 aa7.26□□□□□ -1.25
VIPAS39-204ENST00000553576 ANO2Q9NQ90 1003 aa7.26□□□□□ -1.25
VIPAS39-204ENST00000553576 FPGT-TNNI3KV9GXZ4 949 aa7.26□□□□□ -1.25
VIPAS39-204ENST00000553576 AKAP11Q9UKA4 1901 aa7.25□□□□□ -1.25
VIPAS39-204ENST00000553576 SOBPA7XYQ1 873 aa7.25□□□□□ -1.25
VIPAS39-204ENST00000553576 EYA2O00167 538 aa7.25□□□□□ -1.25
VIPAS39-204ENST00000553576 HSP90AA1P07900 732 aaKnown RBP7.25□□□□□ -1.25
VIPAS39-204ENST00000553576 NEK4P51957 841 aa7.25□□□□□ -1.25
VIPAS39-204ENST00000553576 TFCP2Q12800 502 aa7.25□□□□□ -1.25
VIPAS39-204ENST00000553576 NECTIN1Q15223 517 aa7.25□□□□□ -1.25
VIPAS39-204ENST00000553576 DDB1Q16531 1140 aa7.25□□□□□ -1.25
VIPAS39-204ENST00000553576 MRPL14Q6P1L8 145 aaKnown RBP7.25□□□□□ -1.25
VIPAS39-204ENST00000553576 KIF6Q6ZMV9 814 aa7.25□□□□□ -1.25
VIPAS39-204ENST00000553576 TMEM151AQ8N4L1 468 aa7.25□□□□□ -1.25
VIPAS39-204ENST00000553576 KLHDC4Q8TBB5 520 aa7.25□□□□□ -1.25
VIPAS39-204ENST00000553576 MAP4K1Q92918 833 aa7.25□□□□□ -1.25
VIPAS39-204ENST00000553576 TNPO1Q92973 898 aaKnown RBP7.25□□□□□ -1.25
VIPAS39-204ENST00000553576 AK7Q96M32 723 aa7.25□□□□□ -1.25
VIPAS39-204ENST00000553576 TTC14Q96N46 770 aa7.25□□□□□ -1.25
VIPAS39-204ENST00000553576 HAUS7Q99871 368 aa7.25□□□□□ -1.25
VIPAS39-204ENST00000553576 ALDH8A1Q9H2A2 487 aaPredicted RBP7.25□□□□□ -1.25
VIPAS39-204ENST00000553576 PALD1Q9ULE6 856 aa7.25□□□□□ -1.25
VIPAS39-204ENST00000553576 COL5A3P25940 1745 aaPredicted RBP7.24□□□□□ -1.25
VIPAS39-204ENST00000553576 JCADQ9P266 1359 aa7.24□□□□□ -1.25
VIPAS39-204ENST00000553576 MAP4K4O95819 1239 aaPredicted RBP7.24□□□□□ -1.25
VIPAS39-204ENST00000553576 EIF5P55010 431 aaKnown RBP7.24□□□□□ -1.25
VIPAS39-204ENST00000553576 SH3BP2P78314 561 aa7.24□□□□□ -1.25
VIPAS39-204ENST00000553576 SKOR2Q2VWA4 1001 aaPredicted RBP7.24□□□□□ -1.25
VIPAS39-204ENST00000553576 USPL1Q5W0Q7 1092 aa7.24□□□□□ -1.25
VIPAS39-204ENST00000553576 CWC27Q6UX04 472 aaKnown RBP7.24□□□□□ -1.25
VIPAS39-204ENST00000553576 ZNF34Q8IZ26 560 aa7.24□□□□□ -1.25
VIPAS39-204ENST00000553576 JARID2Q92833 1246 aaPredicted RBP7.24□□□□□ -1.25
VIPAS39-204ENST00000553576 GBP4Q96PP9 640 aa7.24□□□□□ -1.25
VIPAS39-204ENST00000553576 PURBQ96QR8 312 aaKnown RBP7.24□□□□□ -1.25
VIPAS39-204ENST00000553576 NUDT12Q9BQG2 462 aa7.24□□□□□ -1.25
VIPAS39-204ENST00000553576 SIL1Q9H173 461 aa7.24□□□□□ -1.25
VIPAS39-204ENST00000553576 ZBTB3Q9H5J0 574 aa7.24□□□□□ -1.25
VIPAS39-204ENST00000553576 DIAPH3Q9NSV4 1193 aa7.24□□□□□ -1.25
VIPAS39-204ENST00000553576 DBNLQ9UJU6 430 aaKnown RBP7.24□□□□□ -1.25
VIPAS39-204ENST00000553576 SNX14Q9Y5W7 946 aa7.24□□□□□ -1.25
VIPAS39-204ENST00000553576 LAMA4Q16363 1823 aa7.23□□□□□ -1.25
VIPAS39-204ENST00000553576 HOXA2O43364 376 aa7.23□□□□□ -1.25
VIPAS39-204ENST00000553576 GDF11O95390 407 aa7.23□□□□□ -1.25
VIPAS39-204ENST00000553576 USP46P62068 366 aa7.23□□□□□ -1.25
VIPAS39-204ENST00000553576 RASSF7Q02833 373 aa7.23□□□□□ -1.25
VIPAS39-204ENST00000553576 SCARF1Q14162 830 aa7.23□□□□□ -1.25
VIPAS39-204ENST00000553576 NLRP10Q86W26 655 aa7.23□□□□□ -1.25
VIPAS39-204ENST00000553576 MARCH10Q8NA82 808 aaPredicted RBP7.23□□□□□ -1.25
VIPAS39-204ENST00000553576 SMARCC1Q92922 1105 aaPredicted RBP7.23□□□□□ -1.25
VIPAS39-204ENST00000553576 TMX3Q96JJ7 454 aa7.23□□□□□ -1.25
VIPAS39-204ENST00000553576 BOLA2Q9H3K6 86 aa7.23□□□□□ -1.25
VIPAS39-204ENST00000553576 TLR7Q9NYK1 1049 aaKnown RBP7.23□□□□□ -1.25
VIPAS39-204ENST00000553576 AKAP2Q9Y2D5 859 aa7.23□□□□□ -1.25
VIPAS39-204ENST00000553576 TLL2Q9Y6L7 1015 aa7.23□□□□□ -1.25
VIPAS39-204ENST00000553576 CCDC171Q6TFL3 1326 aa7.23□□□□□ -1.25
VIPAS39-204ENST00000553576 LAMB2P55268 1798 aa7.23□□□□□ -1.25
VIPAS39-204ENST00000553576 PALLDQ8WX93 1383 aa7.22□□□□□ -1.25
VIPAS39-204ENST00000553576 ABCC12Q96J65 1359 aa7.22□□□□□ -1.25
VIPAS39-204ENST00000553576 MED23Q9ULK4 1368 aa7.22□□□□□ -1.25
VIPAS39-204ENST00000553576 TESPA1A2RU30 521 aaPredicted RBP7.22□□□□□ -1.25
VIPAS39-204ENST00000553576 TRAK2O60296 914 aa7.22□□□□□ -1.25
VIPAS39-204ENST00000553576 PDE8AO60658 829 aa7.22□□□□□ -1.25
VIPAS39-204ENST00000553576 PDIA4P13667 645 aaKnown RBP7.22□□□□□ -1.25
VIPAS39-204ENST00000553576 PTH1RQ03431 593 aa7.22□□□□□ -1.25
VIPAS39-204ENST00000553576 NMIQ13287 307 aaPredicted RBP7.22□□□□□ -1.25
VIPAS39-204ENST00000553576 VPS72Q15906 364 aa7.22□□□□□ -1.25
VIPAS39-204ENST00000553576 HLFQ16534 295 aa7.22□□□□□ -1.25
VIPAS39-204ENST00000553576 CCDC57Q2TAC2 916 aa7.22□□□□□ -1.25
VIPAS39-204ENST00000553576 VPS53Q5VIR6 699 aa7.22□□□□□ -1.25
VIPAS39-204ENST00000553576 INTS5Q6P9B9 1019 aaKnown RBP7.22□□□□□ -1.25
VIPAS39-204ENST00000553576 FNBP4Q8N3X1 1017 aaPredicted RBP7.22□□□□□ -1.25
VIPAS39-204ENST00000553576 KBTBD3Q8NAB2 608 aa7.22□□□□□ -1.25
VIPAS39-204ENST00000553576 TTLL11Q8NHH1 800 aa7.22□□□□□ -1.25
VIPAS39-204ENST00000553576 DBNDD2Q9BQY9 259 aa7.22□□□□□ -1.25
VIPAS39-204ENST00000553576 HMG20BQ9P0W2 317 aa7.22□□□□□ -1.25
VIPAS39-204ENST00000553576 CEP126Q9P2H0 1117 aa7.22□□□□□ -1.25
VIPAS39-204ENST00000553576 ZBTB1Q9Y2K1 713 aa7.22□□□□□ -1.25
VIPAS39-204ENST00000553576 RIPOR2Q9Y4F9 1068 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms