RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 MECOMQ03112 1051 aa16.48■□□□□ 0.23
APEX1-205ENST00000553555 VPS53Q5VIR6 699 aa16.48■□□□□ 0.23
APEX1-205ENST00000553555 NAA16Q6N069 864 aaPredicted RBP16.48■□□□□ 0.23
APEX1-205ENST00000553555 TBC1D22AQ8WUA7 517 aa16.48■□□□□ 0.23
APEX1-205ENST00000553555 KCNB2Q92953 911 aa16.48■□□□□ 0.23
APEX1-205ENST00000553555 IL17RAQ96F46 866 aa16.48■□□□□ 0.23
APEX1-205ENST00000553555 PALD1Q9ULE6 856 aa16.48■□□□□ 0.23
APEX1-205ENST00000553555 LDHBP07195 334 aaKnown RBP16.47■□□□□ 0.23
APEX1-205ENST00000553555 AOC3Q16853 763 aa16.47■□□□□ 0.23
APEX1-205ENST00000553555 NLGN2Q8NFZ4 835 aa16.47■□□□□ 0.23
APEX1-205ENST00000553555 VPS33BQ9H267 617 aa16.47■□□□□ 0.23
APEX1-205ENST00000553555 DBNDD1Q9H9R9 158 aa16.47■□□□□ 0.23
APEX1-205ENST00000553555 ZNF646O15015 1829 aaPredicted RBP16.47■□□□□ 0.23
APEX1-205ENST00000553555 PSME4Q14997 1843 aa16.47■□□□□ 0.23
APEX1-205ENST00000553555 GRIK5Q16478 980 aa16.46■□□□□ 0.23
APEX1-205ENST00000553555 TTLL5Q6EMB2 1281 aa16.46■□□□□ 0.23
APEX1-205ENST00000553555 ADGRA1Q86SQ6 560 aa16.46■□□□□ 0.23
APEX1-205ENST00000553555 AIDAQ96BJ3 306 aa16.46■□□□□ 0.23
APEX1-205ENST00000553555 STRBPQ96SI9 672 aaKnown RBP16.46■□□□□ 0.23
APEX1-205ENST00000553555 U3KPZ7 1027 aaPredicted RBP16.46■□□□□ 0.23
APEX1-205ENST00000553555 PPIP5K2O43314 1243 aa16.45■□□□□ 0.22
APEX1-205ENST00000553555 ECE2O60344 883 aa16.45■□□□□ 0.22
APEX1-205ENST00000553555 MFSD14BQ5SR56 506 aa16.45■□□□□ 0.22
APEX1-205ENST00000553555 CREB3L3Q68CJ9 461 aa16.45■□□□□ 0.22
APEX1-205ENST00000553555 RASEFQ8IZ41 740 aa16.45■□□□□ 0.22
APEX1-205ENST00000553555 DDRGK1Q96HY6 314 aa16.45■□□□□ 0.22
APEX1-205ENST00000553555 SNX14Q9Y5W7 946 aa16.45■□□□□ 0.22
APEX1-205ENST00000553555 FOXP2O15409 715 aa16.45■□□□□ 0.22
APEX1-205ENST00000553555 MBD4O95243 580 aa16.45■□□□□ 0.22
APEX1-205ENST00000553555 RABEP1Q15276 862 aa16.45■□□□□ 0.22
APEX1-205ENST00000553555 DZIP1Q86YF9 867 aaKnown RBP16.45■□□□□ 0.22
APEX1-205ENST00000553555 BCS1LQ9Y276 419 aa16.45■□□□□ 0.22
APEX1-205ENST00000553555 SLC27A2O14975 620 aa16.44■□□□□ 0.22
APEX1-205ENST00000553555 GSTO1P78417 241 aa16.44■□□□□ 0.22
APEX1-205ENST00000553555 MIGA1Q8NAN2 632 aa16.44■□□□□ 0.22
APEX1-205ENST00000553555 IPO9Q96P70 1041 aaKnown RBP16.44■□□□□ 0.22
APEX1-205ENST00000553555 ARMT1Q9H993 441 aa16.44■□□□□ 0.22
APEX1-205ENST00000553555 KCNQ5Q9NR82 932 aa16.44■□□□□ 0.22
APEX1-205ENST00000553555 MAGEB6P1A0A0J9YX57 407 aa16.43■□□□□ 0.22
APEX1-205ENST00000553555 STRIP1Q5VSL9 837 aa16.43■□□□□ 0.22
APEX1-205ENST00000553555 RNF20Q5VTR2 975 aa16.43■□□□□ 0.22
APEX1-205ENST00000553555 LCORLQ8N3X6 602 aa16.43■□□□□ 0.22
APEX1-205ENST00000553555 FBXW7Q969H0 707 aa16.43■□□□□ 0.22
APEX1-205ENST00000553555 RIOK1Q9BRS2 568 aaKnown RBP16.43■□□□□ 0.22
APEX1-205ENST00000553555 ZNF277Q9NRM2 450 aaPredicted RBP16.43■□□□□ 0.22
APEX1-205ENST00000553555 SUGT1Q9Y2Z0 365 aa16.43■□□□□ 0.22
APEX1-205ENST00000553555 PATL2C9JE40 543 aaKnown RBP16.42■□□□□ 0.22
APEX1-205ENST00000553555 LDHCP07864 332 aa16.42■□□□□ 0.22
APEX1-205ENST00000553555 ZKSCAN1P17029 563 aaPredicted RBP16.42■□□□□ 0.22
APEX1-205ENST00000553555 GNAT2P19087 354 aa16.42■□□□□ 0.22
APEX1-205ENST00000553555 FKBP1AP62942 108 aaKnown RBP16.42■□□□□ 0.22
APEX1-205ENST00000553555 TSGA10IPQ3SY00 556 aa16.42■□□□□ 0.22
APEX1-205ENST00000553555 CERS5Q8N5B7 392 aa16.42■□□□□ 0.22
APEX1-205ENST00000553555 FHDC1Q9C0D6 1143 aaPredicted RBP16.42■□□□□ 0.22
APEX1-205ENST00000553555 LAMA4Q16363 1823 aa16.42■□□□□ 0.22
APEX1-205ENST00000553555 FGAP02671 866 aa16.41■□□□□ 0.22
APEX1-205ENST00000553555 IARSP41252 1262 aaKnown RBP16.41■□□□□ 0.22
APEX1-205ENST00000553555 DYNLL1P63167 89 aaKnown RBP16.41■□□□□ 0.22
APEX1-205ENST00000553555 ALX1Q15699 326 aa16.41■□□□□ 0.22
APEX1-205ENST00000553555 LARGE2Q8N3Y3 721 aa16.41■□□□□ 0.22
APEX1-205ENST00000553555 CTNNA3Q9UI47 895 aa16.41■□□□□ 0.22
APEX1-205ENST00000553555 BAZ2AQ9UIF9 1905 aaKnown RBP16.41■□□□□ 0.22
APEX1-205ENST00000553555 USP17L3A6NCW0 530 aa16.41■□□□□ 0.22
APEX1-205ENST00000553555 USP17L4A6NCW7 530 aa16.41■□□□□ 0.22
APEX1-205ENST00000553555 YDJCA8MPS7 323 aa16.41■□□□□ 0.22
APEX1-205ENST00000553555 GSG1L2A8MUP6 293 aa16.41■□□□□ 0.22
APEX1-205ENST00000553555 NFKBIEO00221 500 aa16.41■□□□□ 0.22
APEX1-205ENST00000553555 CYP21A2P08686 494 aa16.41■□□□□ 0.22
APEX1-205ENST00000553555 COL4A5P29400 1685 aa16.41■□□□□ 0.22
APEX1-205ENST00000553555 DIXDC1Q155Q3 683 aa16.41■□□□□ 0.22
APEX1-205ENST00000553555 DACT2Q5SW24 774 aa16.41■□□□□ 0.22
APEX1-205ENST00000553555 USP17L1Q7RTZ2 530 aa16.41■□□□□ 0.22
APEX1-205ENST00000553555 FAM163AQ96GL9 167 aaPredicted RBP16.41■□□□□ 0.22
APEX1-205ENST00000553555 CDK5RAP2Q96SN8 1893 aa16.41■□□□□ 0.22
APEX1-205ENST00000553555 MXD3Q9BW11 206 aa16.41■□□□□ 0.22
APEX1-205ENST00000553555 TAOK3Q9H2K8 898 aa16.41■□□□□ 0.22
APEX1-205ENST00000553555 SLC4A4Q9Y6R1 1079 aa16.41■□□□□ 0.22
APEX1-205ENST00000553555 RPAP1Q9BWH6 1393 aaPredicted RBP16.4■□□□□ 0.22
APEX1-205ENST00000553555 MROH7-TTC4A0A0A0MT08 1334 aa16.4■□□□□ 0.22
APEX1-205ENST00000553555 PRKAB2O43741 272 aa16.4■□□□□ 0.22
APEX1-205ENST00000553555 APPP05067 770 aa16.4■□□□□ 0.22
APEX1-205ENST00000553555 SLF2Q8IX21 1173 aa16.4■□□□□ 0.22
APEX1-205ENST00000553555 IFNL3Q8IZI9 196 aa16.4■□□□□ 0.22
APEX1-205ENST00000553555 SNX21Q969T3 373 aa16.4■□□□□ 0.22
APEX1-205ENST00000553555 TM6SF1Q9BZW5 370 aa16.4■□□□□ 0.22
APEX1-205ENST00000553555 LTBP3Q9NS15 1303 aa16.39■□□□□ 0.21
APEX1-205ENST00000553555 PPP4CP60510 307 aa16.39■□□□□ 0.21
APEX1-205ENST00000553555 ADCK5Q3MIX3 580 aa16.39■□□□□ 0.21
APEX1-205ENST00000553555 AATFQ9NY61 560 aaKnown RBP eCLIP16.39■□□□□ 0.21
APEX1-205ENST00000553555 TAF6LQ9Y6J9 622 aa16.39■□□□□ 0.21
APEX1-205ENST00000553555 ZMYM6O95789 1325 aa16.38■□□□□ 0.21
APEX1-205ENST00000553555 BECN1Q14457 450 aa16.38■□□□□ 0.21
APEX1-205ENST00000553555 IL27Q8NEV9 243 aa16.38■□□□□ 0.21
APEX1-205ENST00000553555 SYT17Q9BSW7 474 aa16.38■□□□□ 0.21
APEX1-205ENST00000553555 TBC1D2Q9BYX2 928 aa16.38■□□□□ 0.21
APEX1-205ENST00000553555 EPB41L4AQ9HCS5 686 aaPredicted RBP16.38■□□□□ 0.21
APEX1-205ENST00000553555 GAKO14976 1311 aa16.38■□□□□ 0.21
APEX1-205ENST00000553555 GPR75-ASB3A0A0A6YYF3 556 aa16.37■□□□□ 0.21
APEX1-205ENST00000553555 BAG3O95817 575 aa16.37■□□□□ 0.21
APEX1-205ENST00000553555 NEK4P51957 841 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms