RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 DEFB129Q9H1M3 183 aa29.15■■■□□ 2.26
TDP1-205ENST00000553527 NF2P35240 595 aa29.14■■■□□ 2.26
TDP1-205ENST00000553527 PRKG1Q13976 671 aa29.14■■■□□ 2.26
TDP1-205ENST00000553527 GORABQ5T7V8 394 aa29.14■■■□□ 2.26
TDP1-205ENST00000553527 RGMBQ6NW40 437 aa29.14■■■□□ 2.26
TDP1-205ENST00000553527 COL1A1P02452 1464 aaPredicted RBP29.13■■■□□ 2.25
TDP1-205ENST00000553527 ZNF157P51786 506 aaPredicted RBP29.13■■■□□ 2.25
TDP1-205ENST00000553527 RRP1P56182 461 aaKnown RBP29.13■■■□□ 2.25
TDP1-205ENST00000553527 CEP85Q6P2H3 762 aa29.13■■■□□ 2.25
TDP1-205ENST00000553527 TEKT1Q969V4 418 aa29.13■■■□□ 2.25
TDP1-205ENST00000553527 DENND2AQ9ULE3 1009 aa29.13■■■□□ 2.25
TDP1-205ENST00000553527 AIDAQ96BJ3 306 aa29.12■■■□□ 2.25
TDP1-205ENST00000553527 ZNF70Q9UC06 446 aaPredicted RBP29.12■■■□□ 2.25
TDP1-205ENST00000553527 DDX19BQ9UMR2 479 aa29.12■■■□□ 2.25
TDP1-205ENST00000553527 UBE2Q2LH0YL09 131 aa29.11■■■□□ 2.25
TDP1-205ENST00000553527 C20orf194Q5TEA3 1177 aa29.11■■■□□ 2.25
TDP1-205ENST00000553527 MAP2K1Q02750 393 aaPredicted RBP29.1■■■□□ 2.25
TDP1-205ENST00000553527 SUGT1Q9Y2Z0 365 aa29.1■■■□□ 2.25
TDP1-205ENST00000553527 TCP10L2B9ZVM9 353 aa29.09■■■□□ 2.25
TDP1-205ENST00000553527 SEMA3EO15041 775 aa29.09■■■□□ 2.25
TDP1-205ENST00000553527 FOXN1O15353 648 aa29.09■■■□□ 2.25
TDP1-205ENST00000553527 HDLBPQ00341 1268 aaKnown RBP29.09■■■□□ 2.25
TDP1-205ENST00000553527 SPDYE2Q495Y8 402 aa29.09■■■□□ 2.25
TDP1-205ENST00000553527 WBP1LQ9NX94 342 aa29.09■■■□□ 2.25
TDP1-205ENST00000553527 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.09■■■□□ 2.25
TDP1-205ENST00000553527 FZD1Q9UP38 647 aa29.09■■■□□ 2.25
TDP1-205ENST00000553527 MAST3O60307 1309 aa29.09■■■□□ 2.25
TDP1-205ENST00000553527 PAPPA2Q9BXP8 1791 aa29.08■■■□□ 2.25
TDP1-205ENST00000553527 LDHBP07195 334 aaKnown RBP29.08■■■□□ 2.25
TDP1-205ENST00000553527 PRDX5P30044 214 aa29.08■■■□□ 2.25
TDP1-205ENST00000553527 MAP2K2P36507 400 aa29.08■■■□□ 2.25
TDP1-205ENST00000553527 FKBP1BP68106 108 aa29.08■■■□□ 2.25
TDP1-205ENST00000553527 RASGRF1Q13972 1273 aa29.08■■■□□ 2.25
TDP1-205ENST00000553527 RASA3Q14644 834 aa29.08■■■□□ 2.25
TDP1-205ENST00000553527 ZIC5Q96T25 663 aa29.07■■■□□ 2.24
TDP1-205ENST00000553527 ABCF2Q9UG63 623 aa29.07■■■□□ 2.24
TDP1-205ENST00000553527 CACNB3P54284 484 aa29.06■■■□□ 2.24
TDP1-205ENST00000553527 PDE3AQ14432 1141 aa29.06■■■□□ 2.24
TDP1-205ENST00000553527 CCDC102AQ96A19 550 aa29.06■■■□□ 2.24
TDP1-205ENST00000553527 ZDHHC15Q96MV8 337 aa29.06■■■□□ 2.24
TDP1-205ENST00000553527 BEGAINQ9BUH8 593 aa29.06■■■□□ 2.24
TDP1-205ENST00000553527 EXOC6BQ9Y2D4 811 aa29.06■■■□□ 2.24
TDP1-205ENST00000553527 NOP58Q9Y2X3 529 aaKnown RBP29.06■■■□□ 2.24
TDP1-205ENST00000553527 CENPBP07199 599 aaPredicted RBP29.05■■■□□ 2.24
TDP1-205ENST00000553527 NOGQ13253 232 aa29.05■■■□□ 2.24
TDP1-205ENST00000553527 DIXDC1Q155Q3 683 aa29.05■■■□□ 2.24
TDP1-205ENST00000553527 TNNI3KQ59H18 835 aa29.05■■■□□ 2.24
TDP1-205ENST00000553527 NBPF12Q5TAG4 269 aaPredicted RBP29.05■■■□□ 2.24
TDP1-205ENST00000553527 MRIQ9BWK5 157 aa29.05■■■□□ 2.24
TDP1-205ENST00000553527 ZBTB40Q9NUA8 1239 aa29.05■■■□□ 2.24
TDP1-205ENST00000553527 ANGEL1Q9UNK9 670 aaKnown RBP29.05■■■□□ 2.24
TDP1-205ENST00000553527 PPP2R3BQ9Y5P8 575 aa29.05■■■□□ 2.24
TDP1-205ENST00000553527 FPGT-TNNI3KV9GXZ4 949 aa29.05■■■□□ 2.24
TDP1-205ENST00000553527 MYH2Q9UKX2 1941 aa29.04■■■□□ 2.24
TDP1-205ENST00000553527 FAM155AB1AL88 458 aaPredicted RBP29.04■■■□□ 2.24
TDP1-205ENST00000553527 TNFAIP1Q13829 316 aa29.04■■■□□ 2.24
TDP1-205ENST00000553527 HHIPL2Q6UWX4 724 aa29.04■■■□□ 2.24
TDP1-205ENST00000553527 ARMC9Q7Z3E5 817 aa29.04■■■□□ 2.24
TDP1-205ENST00000553527 SUPT20HL1Q3ZLR7 823 aa29.03■■■□□ 2.24
TDP1-205ENST00000553527 APOBEC3HQ6NTF7 200 aaKnown RBP29.03■■■□□ 2.24
TDP1-205ENST00000553527 ZGPATQ8N5A5 531 aaKnown RBP29.03■■■□□ 2.24
TDP1-205ENST00000553527 CHMP4BQ9H444 224 aaKnown RBP29.03■■■□□ 2.24
TDP1-205ENST00000553527 SUPT16HQ9Y5B9 1047 aaKnown RBP29.03■■■□□ 2.24
TDP1-205ENST00000553527 THSD7BQ9C0I4 1608 aa29.02■■■□□ 2.24
TDP1-205ENST00000553527 SALL1Q9NSC2 1324 aa29.02■■■□□ 2.24
TDP1-205ENST00000553527 TNNI2P48788 182 aa29.02■■■□□ 2.24
TDP1-205ENST00000553527 COL13A1Q5TAT6 717 aaPredicted RBP29.02■■■□□ 2.24
TDP1-205ENST00000553527 PI16Q6UXB8 463 aa29.02■■■□□ 2.24
TDP1-205ENST00000553527 DBNDD2Q9BQY9 259 aa29.02■■■□□ 2.24
TDP1-205ENST00000553527 BCL11AQ9H165 835 aa29.02■■■□□ 2.24
TDP1-205ENST00000553527 GPR108Q9NPR9 543 aa29.02■■■□□ 2.24
TDP1-205ENST00000553527 TMOD2Q9NZR1 351 aa29.02■■■□□ 2.24
TDP1-205ENST00000553527 HMG20BQ9P0W2 317 aa29.02■■■□□ 2.24
TDP1-205ENST00000553527 APBB1O00213 710 aa29.01■■■□□ 2.23
TDP1-205ENST00000553527 SLC10A3P09131 477 aa29.01■■■□□ 2.23
TDP1-205ENST00000553527 KIF23Q02241 960 aaPredicted RBP29.01■■■□□ 2.23
TDP1-205ENST00000553527 RPAP2Q8IXW5 612 aaPredicted RBP29.01■■■□□ 2.23
TDP1-205ENST00000553527 TMEM39BQ9GZU3 492 aa29.01■■■□□ 2.23
TDP1-205ENST00000553527 CCDC8Q9H0W5 538 aaPredicted RBP29.01■■■□□ 2.23
TDP1-205ENST00000553527 AK9Q5TCS8 1911 aa29■■■□□ 2.23
TDP1-205ENST00000553527 PPP1R12BO60237 982 aaPredicted RBP29■■■□□ 2.23
TDP1-205ENST00000553527 CTCFP49711 727 aaPredicted RBP29■■■□□ 2.23
TDP1-205ENST00000553527 CCDC158Q5M9N0 1113 aa29■■■□□ 2.23
TDP1-205ENST00000553527 TTC39AQ5SRH9 613 aa29■■■□□ 2.23
TDP1-205ENST00000553527 DZIP1Q86YF9 867 aaKnown RBP29■■■□□ 2.23
TDP1-205ENST00000553527 RASAL3Q86YV0 1011 aa29■■■□□ 2.23
TDP1-205ENST00000553527 SPATA5Q8NB90 893 aa29■■■□□ 2.23
TDP1-205ENST00000553527 DAGLAQ9Y4D2 1042 aa29■■■□□ 2.23
TDP1-205ENST00000553527 LBX1P52954 281 aa28.99■■■□□ 2.23
TDP1-205ENST00000553527 TBC1D9Q6ZT07 1266 aa28.99■■■□□ 2.23
TDP1-205ENST00000553527 CDAN1Q8IWY9 1227 aa28.99■■■□□ 2.23
TDP1-205ENST00000553527 TSKSQ9UJT2 592 aa28.99■■■□□ 2.23
TDP1-205ENST00000553527 UQCRFS1P1P0C7P4 283 aa28.98■■■□□ 2.23
TDP1-205ENST00000553527 ARID4AP29374 1257 aaPredicted RBP28.98■■■□□ 2.23
TDP1-205ENST00000553527 MKRN3Q13064 507 aaKnown RBP28.98■■■□□ 2.23
TDP1-205ENST00000553527 SPTY2D1Q68D10 685 aaPredicted RBP28.98■■■□□ 2.23
TDP1-205ENST00000553527 ERICH6Q7L0X2 663 aa28.98■■■□□ 2.23
TDP1-205ENST00000553527 SIRT2Q8IXJ6 389 aa28.98■■■□□ 2.23
TDP1-205ENST00000553527 SNRKQ9NRH2 765 aa28.98■■■□□ 2.23
TDP1-205ENST00000553527 HMMRO75330 724 aa28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms