RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 PRDM6Q9NQX0 595 aa8.19□□□□□ -1.1
SYNE2-210ENST00000553455 LRRC4BQ9NT99 713 aa8.19□□□□□ -1.1
SYNE2-210ENST00000553455 TM4SF5O14894 197 aa8.18□□□□□ -1.1
SYNE2-210ENST00000553455 GREM1O60565 184 aa8.18□□□□□ -1.1
SYNE2-210ENST00000553455 LILRB5O75023 590 aa8.18□□□□□ -1.1
SYNE2-210ENST00000553455 CELA2BP08218 269 aaPredicted RBP8.18□□□□□ -1.1
SYNE2-210ENST00000553455 CDC25BP30305 580 aa8.18□□□□□ -1.1
SYNE2-210ENST00000553455 CABP4P57796 275 aa8.18□□□□□ -1.1
SYNE2-210ENST00000553455 CAMK2GQ13555 558 aaPredicted RBP8.18□□□□□ -1.1
SYNE2-210ENST00000553455 TXNDC11Q6PKC3 985 aa8.18□□□□□ -1.1
SYNE2-210ENST00000553455 LYPD4Q6UWN0 246 aa8.18□□□□□ -1.1
SYNE2-210ENST00000553455 ZNF296Q8WUU4 475 aaPredicted RBP8.18□□□□□ -1.1
SYNE2-210ENST00000553455 SOX17Q9H6I2 414 aaPredicted RBP8.18□□□□□ -1.1
SYNE2-210ENST00000553455 PRKAG2Q9UGJ0 569 aa8.18□□□□□ -1.1
SYNE2-210ENST00000553455 PPME1Q9Y570 386 aa8.18□□□□□ -1.1
SYNE2-210ENST00000553455 PCDHB5Q9Y5E4 795 aa8.18□□□□□ -1.1
SYNE2-210ENST00000553455 FAM177BA6PVY3 158 aa8.17□□□□□ -1.1
SYNE2-210ENST00000553455 HOXB4P17483 251 aaPredicted RBP8.17□□□□□ -1.1
SYNE2-210ENST00000553455 ZNF252P-AS1Q0IIN9 211 aa8.17□□□□□ -1.1
SYNE2-210ENST00000553455 PDZD3Q86UT5 571 aa8.17□□□□□ -1.1
SYNE2-210ENST00000553455 WHAMMQ8TF30 809 aa8.17□□□□□ -1.1
SYNE2-210ENST00000553455 TANGO6Q9C0B7 1094 aa8.17□□□□□ -1.1
SYNE2-210ENST00000553455 NRSN2Q9GZP1 204 aa8.17□□□□□ -1.1
SYNE2-210ENST00000553455 LINC01387J3KSC0 135 aa8.16□□□□□ -1.1
SYNE2-210ENST00000553455 FGRP09769 529 aa8.16□□□□□ -1.1
SYNE2-210ENST00000553455 NID1P14543 1247 aa8.16□□□□□ -1.1
SYNE2-210ENST00000553455 ARNTP27540 789 aa8.16□□□□□ -1.1
SYNE2-210ENST00000553455 DNAJA1P31689 397 aaKnown RBP8.16□□□□□ -1.1
SYNE2-210ENST00000553455 PIP4K2BP78356 416 aa8.16□□□□□ -1.1
SYNE2-210ENST00000553455 MSL1Q68DK7 614 aa8.16□□□□□ -1.1
SYNE2-210ENST00000553455 TRIM42Q8IWZ5 723 aa8.16□□□□□ -1.1
SYNE2-210ENST00000553455 GOLM1Q8NBJ4 401 aa8.16□□□□□ -1.1
SYNE2-210ENST00000553455 GRIN3AQ8TCU5 1115 aa8.16□□□□□ -1.1
SYNE2-210ENST00000553455 SUPT16HQ9Y5B9 1047 aaKnown RBP8.16□□□□□ -1.1
SYNE2-210ENST00000553455 WFS1O76024 890 aa8.15□□□□□ -1.1
SYNE2-210ENST00000553455 ATF4P18848 351 aaPredicted RBP8.15□□□□□ -1.1
SYNE2-210ENST00000553455 CRKP46108 304 aa8.15□□□□□ -1.1
SYNE2-210ENST00000553455 ARID5AQ03989 594 aa8.15□□□□□ -1.1
SYNE2-210ENST00000553455 SNAP47Q5SQN1 464 aa8.15□□□□□ -1.1
SYNE2-210ENST00000553455 WFDC8Q8IUA0 241 aa8.15□□□□□ -1.1
SYNE2-210ENST00000553455 SLC7A3Q8WY07 619 aa8.15□□□□□ -1.1
SYNE2-210ENST00000553455 WNT8BQ93098 351 aa8.15□□□□□ -1.1
SYNE2-210ENST00000553455 GAL3ST3Q96A11 431 aa8.15□□□□□ -1.1
SYNE2-210ENST00000553455 NT5C1AQ9BXI3 368 aa8.15□□□□□ -1.1
SYNE2-210ENST00000553455 UBP1Q9NZI7 540 aa8.15□□□□□ -1.1
SYNE2-210ENST00000553455 CYP8B1Q9UNU6 501 aa8.15□□□□□ -1.1
SYNE2-210ENST00000553455 SAMM50Q9Y512 469 aa8.15□□□□□ -1.1
SYNE2-210ENST00000553455 FSCN2O14926 492 aa8.14□□□□□ -1.11
SYNE2-210ENST00000553455 F13A1P00488 732 aa8.14□□□□□ -1.11
SYNE2-210ENST00000553455 DGKGP49619 791 aa8.14□□□□□ -1.11
SYNE2-210ENST00000553455 C19orf57Q0VDD7 668 aa8.14□□□□□ -1.11
SYNE2-210ENST00000553455 AP3B2Q13367 1082 aa8.14□□□□□ -1.11
SYNE2-210ENST00000553455 SEPT6Q14141 434 aa8.14□□□□□ -1.11
SYNE2-210ENST00000553455 LLGL2Q6P1M3 1020 aa8.14□□□□□ -1.11
SYNE2-210ENST00000553455 MPRIPQ6WCQ1 1025 aa8.14□□□□□ -1.11
SYNE2-210ENST00000553455 BNC2Q6ZN30 1099 aaPredicted RBP8.14□□□□□ -1.11
SYNE2-210ENST00000553455 MCF2L2Q86YR7 1114 aa8.14□□□□□ -1.11
SYNE2-210ENST00000553455 UBXN4Q92575 508 aa8.14□□□□□ -1.11
SYNE2-210ENST00000553455 CARD10Q9BWT7 1032 aa8.14□□□□□ -1.11
SYNE2-210ENST00000553455 FAM221AA4D161 298 aa8.13□□□□□ -1.11
SYNE2-210ENST00000553455 GSTP1P09211 210 aaKnown RBP8.13□□□□□ -1.11
SYNE2-210ENST00000553455 GSTM4Q03013 218 aa8.13□□□□□ -1.11
SYNE2-210ENST00000553455 SETDB1Q15047 1291 aa8.13□□□□□ -1.11
SYNE2-210ENST00000553455 LCE2AQ5TA79 106 aaPredicted RBP8.13□□□□□ -1.11
SYNE2-210ENST00000553455 FAM196AQ6ZSG2 479 aa8.13□□□□□ -1.11
SYNE2-210ENST00000553455 CCDC84Q86UT8 332 aaPredicted RBP8.13□□□□□ -1.11
SYNE2-210ENST00000553455 OSGEPQ9NPF4 335 aa8.13□□□□□ -1.11
SYNE2-210ENST00000553455 CACNA2D2Q9NY47 1150 aa8.13□□□□□ -1.11
SYNE2-210ENST00000553455 PPP1R1BQ9UD71 204 aaPredicted RBP8.13□□□□□ -1.11
SYNE2-210ENST00000553455 ECEL1O95672 775 aa8.12□□□□□ -1.11
SYNE2-210ENST00000553455 AMPD1P23109 780 aa8.12□□□□□ -1.11
SYNE2-210ENST00000553455 PTPN11Q06124 597 aaPredicted RBP8.12□□□□□ -1.11
SYNE2-210ENST00000553455 LRRC14Q15048 493 aa8.12□□□□□ -1.11
SYNE2-210ENST00000553455 ZNF385CQ66K41 422 aaPredicted RBP8.12□□□□□ -1.11
SYNE2-210ENST00000553455 FAM117BQ6P1L5 589 aa8.12□□□□□ -1.11
SYNE2-210ENST00000553455 GALNT11Q8NCW6 608 aa8.12□□□□□ -1.11
SYNE2-210ENST00000553455 FBXO27Q8NI29 283 aa8.12□□□□□ -1.11
SYNE2-210ENST00000553455 DDX54Q8TDD1 881 aaKnown RBP8.12□□□□□ -1.11
SYNE2-210ENST00000553455 ZNF775Q96BV0 537 aaPredicted RBP8.12□□□□□ -1.11
SYNE2-210ENST00000553455 KLHDC7BQ96G42 594 aa8.12□□□□□ -1.11
SYNE2-210ENST00000553455 EMILIN2Q9BXX0 1053 aa8.12□□□□□ -1.11
SYNE2-210ENST00000553455 LRRC3Q9BY71 257 aa8.12□□□□□ -1.11
SYNE2-210ENST00000553455 MIR1-1HGQ9H1L0 117 aa8.12□□□□□ -1.11
SYNE2-210ENST00000553455 CBX8Q9HC52 389 aa8.12□□□□□ -1.11
SYNE2-210ENST00000553455 LOC105371045A0A1W2PR82 267 aa8.11□□□□□ -1.11
SYNE2-210ENST00000553455 CTSBP07858 339 aa8.11□□□□□ -1.11
SYNE2-210ENST00000553455 SELPP16109 830 aa8.11□□□□□ -1.11
SYNE2-210ENST00000553455 VPS37DQ86XT2 251 aa8.11□□□□□ -1.11
SYNE2-210ENST00000553455 DMRTC2Q8IXT2 367 aaPredicted RBP8.11□□□□□ -1.11
SYNE2-210ENST00000553455 GATAD2BQ8WXI9 593 aa8.11□□□□□ -1.11
SYNE2-210ENST00000553455 DHX38Q92620 1227 aaKnown RBP8.11□□□□□ -1.11
SYNE2-210ENST00000553455 SEC16BQ96JE7 1060 aa8.11□□□□□ -1.11
SYNE2-210ENST00000553455 SPATA32Q96LK8 384 aa8.11□□□□□ -1.11
SYNE2-210ENST00000553455 GINM1Q9NU53 330 aa8.11□□□□□ -1.11
SYNE2-210ENST00000553455 CILPO75339 1184 aa8.1□□□□□ -1.11
SYNE2-210ENST00000553455 DEAF1O75398 565 aaPredicted RBP8.1□□□□□ -1.11
SYNE2-210ENST00000553455 TRIM37O94972 964 aa8.1□□□□□ -1.11
SYNE2-210ENST00000553455 ATP2B1P20020 1258 aa8.1□□□□□ -1.11
SYNE2-210ENST00000553455 SOX9P48436 509 aa8.1□□□□□ -1.11
SYNE2-210ENST00000553455 ARL4DP49703 201 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms