RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 CRBNQ96SW2 442 aa22.68■■□□□ 1.22
CPSF2-202ENST00000553427 DBNLQ9UJU6 430 aaKnown RBP22.68■■□□□ 1.22
CPSF2-202ENST00000553427 CELF2O95319 508 aaKnown RBP22.67■■□□□ 1.22
CPSF2-202ENST00000553427 PRMT6Q96LA8 375 aaPredicted RBP22.67■■□□□ 1.22
CPSF2-202ENST00000553427 ZDHHC15Q96MV8 337 aa22.67■■□□□ 1.22
CPSF2-202ENST00000553427 HMG20BQ9P0W2 317 aa22.67■■□□□ 1.22
CPSF2-202ENST00000553427 POLR2AP24928 1970 aaKnown RBP22.67■■□□□ 1.22
CPSF2-202ENST00000553427 LDHBP07195 334 aaKnown RBP22.66■■□□□ 1.22
CPSF2-202ENST00000553427 CCDC158Q5M9N0 1113 aa22.66■■□□□ 1.22
CPSF2-202ENST00000553427 HHIPL2Q6UWX4 724 aa22.66■■□□□ 1.22
CPSF2-202ENST00000553427 SPATA5Q8NB90 893 aa22.66■■□□□ 1.22
CPSF2-202ENST00000553427 KLRG1Q96E93 195 aa22.66■■□□□ 1.22
CPSF2-202ENST00000553427 CDCA5Q96FF9 252 aa22.66■■□□□ 1.22
CPSF2-202ENST00000553427 PCDHAC2Q9Y5I4 1007 aa22.66■■□□□ 1.22
CPSF2-202ENST00000553427 CNTNAP1P78357 1384 aa22.65■■□□□ 1.22
CPSF2-202ENST00000553427 RASSF10A6NK89 507 aa22.65■■□□□ 1.22
CPSF2-202ENST00000553427 PRDX5P30044 214 aa22.65■■□□□ 1.22
CPSF2-202ENST00000553427 MCAMP43121 646 aa22.65■■□□□ 1.22
CPSF2-202ENST00000553427 RBM5P52756 815 aaKnown RBP eCLIP22.65■■□□□ 1.22
CPSF2-202ENST00000553427 SPDYE2Q495Y8 402 aa22.65■■□□□ 1.22
CPSF2-202ENST00000553427 PPP2R3BQ9Y5P8 575 aa22.65■■□□□ 1.22
CPSF2-202ENST00000553427 TTC39AQ5SRH9 613 aa22.64■■□□□ 1.21
CPSF2-202ENST00000553427 SPTY2D1Q68D10 685 aaPredicted RBP22.64■■□□□ 1.21
CPSF2-202ENST00000553427 AACSQ86V21 672 aa22.64■■□□□ 1.21
CPSF2-202ENST00000553427 CLASRPQ8N2M8 674 aaKnown RBP22.64■■□□□ 1.21
CPSF2-202ENST00000553427 TLR7Q9NYK1 1049 aaKnown RBP22.64■■□□□ 1.21
CPSF2-202ENST00000553427 PCDHB15Q9Y5E8 787 aa22.64■■□□□ 1.21
CPSF2-202ENST00000553427 TLL2Q9Y6L7 1015 aa22.64■■□□□ 1.21
CPSF2-202ENST00000553427 AOX1Q06278 1338 aa22.63■■□□□ 1.21
CPSF2-202ENST00000553427 HHIPL1Q96JK4 782 aa22.63■■□□□ 1.21
CPSF2-202ENST00000553427 CCDC8Q9H0W5 538 aaPredicted RBP22.63■■□□□ 1.21
CPSF2-202ENST00000553427 DCTPP1Q9H773 170 aa22.63■■□□□ 1.21
CPSF2-202ENST00000553427 IL1RAPL2Q9NP60 686 aa22.63■■□□□ 1.21
CPSF2-202ENST00000553427 IGSF3O75054 1194 aa22.62■■□□□ 1.21
CPSF2-202ENST00000553427 APOBEC3HQ6NTF7 200 aaKnown RBP22.62■■□□□ 1.21
CPSF2-202ENST00000553427 DLK2Q6UY11 383 aa22.62■■□□□ 1.21
CPSF2-202ENST00000553427 ZNF70Q9UC06 446 aaPredicted RBP22.62■■□□□ 1.21
CPSF2-202ENST00000553427 ABT1Q9ULW3 272 aaKnown RBP22.62■■□□□ 1.21
CPSF2-202ENST00000553427 CLRN2A0PK11 232 aa22.61■■□□□ 1.21
CPSF2-202ENST00000553427 FKBP1BP68106 108 aa22.61■■□□□ 1.21
CPSF2-202ENST00000553427 TNFAIP1Q13829 316 aa22.61■■□□□ 1.21
CPSF2-202ENST00000553427 PI16Q6UXB8 463 aa22.61■■□□□ 1.21
CPSF2-202ENST00000553427 SAPCD2Q86UD0 394 aa22.61■■□□□ 1.21
CPSF2-202ENST00000553427 DEFB129Q9H1M3 183 aa22.61■■□□□ 1.21
CPSF2-202ENST00000553427 ZNF408Q9H9D4 720 aa22.61■■□□□ 1.21
CPSF2-202ENST00000553427 GBA2Q9HCG7 927 aaPredicted RBP22.61■■□□□ 1.21
CPSF2-202ENST00000553427 GAKO14976 1311 aa22.6■■□□□ 1.21
CPSF2-202ENST00000553427 FKBP1CQ5VVH2 108 aa22.6■■□□□ 1.21
CPSF2-202ENST00000553427 SLF2Q8IX21 1173 aa22.6■■□□□ 1.21
CPSF2-202ENST00000553427 JMYQ8N9B5 988 aa22.6■■□□□ 1.21
CPSF2-202ENST00000553427 FAM163AQ96GL9 167 aaPredicted RBP22.6■■□□□ 1.21
CPSF2-202ENST00000553427 LRRCC1Q9C099 1032 aa22.6■■□□□ 1.21
CPSF2-202ENST00000553427 TDRD3Q9H7E2 651 aaKnown RBP22.6■■□□□ 1.21
CPSF2-202ENST00000553427 ABCF2Q9UG63 623 aa22.6■■□□□ 1.21
CPSF2-202ENST00000553427 DAGLAQ9Y4D2 1042 aa22.6■■□□□ 1.21
CPSF2-202ENST00000553427 AKAP11Q9UKA4 1901 aa22.6■■□□□ 1.21
CPSF2-202ENST00000553427 PAPPA2Q9BXP8 1791 aa22.6■■□□□ 1.21
CPSF2-202ENST00000553427 APBB1O00213 710 aa22.59■■□□□ 1.21
CPSF2-202ENST00000553427 DIXDC1Q155Q3 683 aa22.59■■□□□ 1.21
CPSF2-202ENST00000553427 ERICH6Q7L0X2 663 aa22.59■■□□□ 1.21
CPSF2-202ENST00000553427 DZIP1Q86YF9 867 aaKnown RBP22.59■■□□□ 1.21
CPSF2-202ENST00000553427 C2orf69Q8N8R5 385 aa22.59■■□□□ 1.21
CPSF2-202ENST00000553427 VEZTQ9HBM0 779 aa22.59■■□□□ 1.21
CPSF2-202ENST00000553427 SUPT16HQ9Y5B9 1047 aaKnown RBP22.59■■□□□ 1.21
CPSF2-202ENST00000553427 IFIT2P09913 472 aaKnown RBP22.58■■□□□ 1.21
CPSF2-202ENST00000553427 DEFB115Q30KQ5 88 aa22.58■■□□□ 1.21
CPSF2-202ENST00000553427 MKRN1Q9UHC7 482 aaKnown RBP22.58■■□□□ 1.21
CPSF2-202ENST00000553427 SCAF8Q9UPN6 1271 aaKnown RBP22.58■■□□□ 1.21
CPSF2-202ENST00000553427 NF2P35240 595 aa22.57■■□□□ 1.2
CPSF2-202ENST00000553427 HDAC1Q13547 482 aaPredicted RBP22.57■■□□□ 1.2
CPSF2-202ENST00000553427 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.57■■□□□ 1.2
CPSF2-202ENST00000553427 TMOD2Q9NZR1 351 aa22.57■■□□□ 1.2
CPSF2-202ENST00000553427 MAST2Q6P0Q8 1798 aa22.56■■□□□ 1.2
CPSF2-202ENST00000553427 CYP2E1P05181 493 aaPredicted RBP22.56■■□□□ 1.2
CPSF2-202ENST00000553427 GSTO1P78417 241 aa22.56■■□□□ 1.2
CPSF2-202ENST00000553427 MECOMQ03112 1051 aa22.56■■□□□ 1.2
CPSF2-202ENST00000553427 RASA3Q14644 834 aa22.56■■□□□ 1.2
CPSF2-202ENST00000553427 FAM83AQ86UY5 434 aa22.56■■□□□ 1.2
CPSF2-202ENST00000553427 MROH7-TTC4A0A0A0MT08 1334 aa22.56■■□□□ 1.2
CPSF2-202ENST00000553427 RPAP1Q9BWH6 1393 aaPredicted RBP22.55■■□□□ 1.2
CPSF2-202ENST00000553427 ZAP70P43403 619 aa22.55■■□□□ 1.2
CPSF2-202ENST00000553427 TNNI2P48788 182 aa22.55■■□□□ 1.2
CPSF2-202ENST00000553427 HUNKP57058 714 aa22.55■■□□□ 1.2
CPSF2-202ENST00000553427 PRAMEF18Q5VWM3 479 aa22.55■■□□□ 1.2
CPSF2-202ENST00000553427 TBC1D9Q6ZT07 1266 aa22.55■■□□□ 1.2
CPSF2-202ENST00000553427 ZNF384Q8TF68 577 aa22.55■■□□□ 1.2
CPSF2-202ENST00000553427 NSUN4Q96CB9 384 aaKnown RBP22.55■■□□□ 1.2
CPSF2-202ENST00000553427 SNRKQ9NRH2 765 aa22.55■■□□□ 1.2
CPSF2-202ENST00000553427 THSD7BQ9C0I4 1608 aa22.55■■□□□ 1.2
CPSF2-202ENST00000553427 SSC5DA1L4H1 1573 aa22.55■■□□□ 1.2
CPSF2-202ENST00000553427 ECE1P42892 770 aa22.54■■□□□ 1.2
CPSF2-202ENST00000553427 VEGFBP49765 207 aa22.54■■□□□ 1.2
CPSF2-202ENST00000553427 SUPT20HL1Q3ZLR7 823 aa22.54■■□□□ 1.2
CPSF2-202ENST00000553427 TMED8Q6PL24 325 aaPredicted RBP22.54■■□□□ 1.2
CPSF2-202ENST00000553427 LRP2BPQ9P2M1 347 aa22.54■■□□□ 1.2
CPSF2-202ENST00000553427 RFX7Q2KHR2 1363 aa22.53■■□□□ 1.2
CPSF2-202ENST00000553427 MYH2Q9UKX2 1941 aa22.53■■□□□ 1.2
CPSF2-202ENST00000553427 MAP4K4O95819 1239 aaPredicted RBP22.53■■□□□ 1.2
CPSF2-202ENST00000553427 LDHCP07864 332 aa22.53■■□□□ 1.2
CPSF2-202ENST00000553427 CDC42EP5Q6NZY7 148 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms