RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, human

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO1-222	ENST00000553154	TTF2	Q9UNY4	1162 aa	Known RBP	12.45	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	AKAP11	Q9UKA4	1901 aa		12.45	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	SSC5D	A1L4H1	1573 aa		12.44	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	GAK	O14976	1311 aa		12.44	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	ADM5	C9JUS6	153 aa		12.44	□□□□□ -0.42
CALCOCO1-222	ENST00000553154		F8W031	263 aa	Predicted RBP	12.44	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	UQCRFS1P1	P0C7P4	283 aa		12.44	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	CRK	P46108	304 aa		12.44	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	CFAP100	Q494V2	611 aa		12.44	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	CST9	Q5W186	159 aa		12.44	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	APOBEC3H	Q6NTF7	200 aa	Known RBP	12.44	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	CDC37L1	Q7L3B6	337 aa		12.44	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	AACS	Q86V21	672 aa		12.44	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	SPATA5	Q8NB90	893 aa		12.44	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	PRMT6	Q96LA8	375 aa	Predicted RBP	12.44	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	ZDHHC15	Q96MV8	337 aa		12.44	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	CCDC8	Q9H0W5	538 aa	Predicted RBP	12.44	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	HDAC9	Q9UKV0	1011 aa		12.44	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	CLEC11A	Q9Y240	323 aa		12.44	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	MYH13	Q9UKX3	1938 aa		12.44	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	SALL3	Q9BXA9	1300 aa		12.43	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	SPDYE2	Q495Y8	402 aa		12.43	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	HHIPL2	Q6UWX4	724 aa		12.43	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	MAST2	Q6P0Q8	1798 aa		12.43	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	MAST3	O60307	1309 aa		12.42	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	ECM29	Q5VYK3	1845 aa		12.42	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	FRAT2	O75474	233 aa	Predicted RBP	12.42	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	HSPA1A	P0DMV8	641 aa	Known RBP	12.42	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	HSPA1B	P0DMV9	641 aa	Known RBP	12.42	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	DLGAP5	Q15398	846 aa		12.42	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	DIXDC1	Q155Q3	683 aa		12.42	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	KRT26	Q7Z3Y9	468 aa		12.42	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	CLASRP	Q8N2M8	674 aa	Known RBP	12.42	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	12.42	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	FAM163A	Q96GL9	167 aa	Predicted RBP	12.42	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	LRRCC1	Q9C099	1032 aa		12.42	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	CREBZF	Q9NS37	354 aa		12.42	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	DAGLA	Q9Y4D2	1042 aa		12.42	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	THSD7B	Q9C0I4	1608 aa		12.41	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	IGSF3	O75054	1194 aa		12.41	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	CYP2E1	P05181	493 aa	Predicted RBP	12.41	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	ZAP70	P43403	619 aa		12.41	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	CCDC158	Q5M9N0	1113 aa		12.41	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	TBC1D9	Q6ZT07	1266 aa		12.41	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	USP48	Q86UV5	1035 aa		12.41	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	SMC5	Q8IY18	1101 aa		12.41	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	ZGPAT	Q8N5A5	531 aa	Known RBP	12.41	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	TEKT1	Q969V4	418 aa		12.41	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	DCPS	Q96C86	337 aa	Known RBP	12.41	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	CDCA5	Q96FF9	252 aa		12.41	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	PIH1D3	Q9NQM4	214 aa	Known RBP	12.41	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	ZNF70	Q9UC06	446 aa	Predicted RBP	12.41	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	CNTNAP1	P78357	1384 aa		12.41	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	DOCK2	Q92608	1830 aa		12.4	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	TMEM88B	A6NKF7	163 aa		12.4	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	APBB1	O00213	710 aa		12.4	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	SMARCA5	O60264	1052 aa	Predicted RBP	12.4	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	LDHB	P07195	334 aa	Known RBP	12.4	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	MECOM	Q03112	1051 aa		12.4	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	TTC39A	Q5SRH9	613 aa		12.4	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	GORAB	Q5T7V8	394 aa		12.4	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	APOBEC3F	Q8IUX4	373 aa	Known RBP	12.4	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	NSUN4	Q96CB9	384 aa	Known RBP	12.4	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	SCAF8	Q9UPN6	1271 aa	Known RBP	12.4	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	PAPPA2	Q9BXP8	1791 aa		12.4	□□□□□ -0.42
CALCOCO1-222	ENST00000553154	RASSF10	A6NK89	507 aa		12.39	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	IGHD	P01880	384 aa		12.39	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	ATP5J	P18859	108 aa		12.39	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	FKBP1C	Q5VVH2	108 aa		12.39	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	SULF1	Q8IWU6	871 aa		12.39	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	TEPSIN	Q96N21	525 aa		12.39	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	TDRD3	Q9H7E2	651 aa	Known RBP	12.39	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	SNRK	Q9NRH2	765 aa		12.39	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	PPP2R3B	Q9Y5P8	575 aa		12.39	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	RPAP1	Q9BWH6	1393 aa	Predicted RBP	12.39	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	MROH7-TTC4	A0A0A0MT08	1334 aa		12.38	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	TRPM7	Q96QT4	1865 aa		12.38	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	GPR75-ASB3	A0A0A6YYF3	556 aa		12.38	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	CLRN2	A0PK11	232 aa		12.38	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	RHBDL3	P58872	404 aa		12.38	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	SPTY2D1	Q68D10	685 aa	Predicted RBP	12.38	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	CDC42EP5	Q6NZY7	148 aa		12.38	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	ADGRA1	Q86SQ6	560 aa		12.38	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	CDAN1	Q8IWY9	1227 aa		12.38	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	OTUD7A	Q8TE49	926 aa	Predicted RBP	12.38	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	GCC1	Q96CN9	775 aa		12.38	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	ANTXR1	Q9H6X2	564 aa		12.38	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	TLL2	Q9Y6L7	1015 aa		12.38	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	NDUFB9	Q9Y6M9	179 aa		12.38	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	CELF2	O95319	508 aa	Known RBP	12.37	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	IFIT2	P09913	472 aa	Known RBP	12.37	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	IRX6	P78412	446 aa	Predicted RBP	12.37	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	ERICH6	Q7L0X2	663 aa		12.37	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	SAPCD2	Q86UD0	394 aa		12.37	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	HHIPL1	Q96JK4	782 aa		12.37	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	HAUS7	Q99871	368 aa		12.37	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	DEFB129	Q9H1M3	183 aa		12.37	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	ABCF2	Q9UG63	623 aa		12.37	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	ATRNL1	Q5VV63	1379 aa		12.37	□□□□□ -0.43
CALCOCO1-222	ENST00000553154	CACNB3	P54284	484 aa		12.36	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms