RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 NAPBQ9H115 298 aa10.72□□□□□ -0.69
RAB3IP-218ENST00000553099 DNM1Q05193 864 aaKnown RBP10.72□□□□□ -0.69
RAB3IP-218ENST00000553099 GAS2L3Q86XJ1 694 aa10.72□□□□□ -0.69
RAB3IP-218ENST00000553099 TFCP2L1Q9NZI6 479 aa10.72□□□□□ -0.69
RAB3IP-218ENST00000553099 DENND2AQ9ULE3 1009 aa10.72□□□□□ -0.69
RAB3IP-218ENST00000553099 GADD45BO75293 160 aaPredicted RBP10.71□□□□□ -0.69
RAB3IP-218ENST00000553099 MBD3O95983 291 aa10.71□□□□□ -0.69
RAB3IP-218ENST00000553099 ZSCAN23Q3MJ62 389 aa10.71□□□□□ -0.69
RAB3IP-218ENST00000553099 RAB11FIP4Q86YS3 637 aa10.71□□□□□ -0.69
RAB3IP-218ENST00000553099 TBC1D10CQ8IV04 446 aa10.71□□□□□ -0.69
RAB3IP-218ENST00000553099 LCORLQ8N3X6 602 aa10.71□□□□□ -0.69
RAB3IP-218ENST00000553099 ZNF804BA4D1E1 1349 aa10.71□□□□□ -0.69
RAB3IP-218ENST00000553099 COL1A1P02452 1464 aaPredicted RBP10.71□□□□□ -0.69
RAB3IP-218ENST00000553099 H3BQV1 296 aa10.71□□□□□ -0.69
RAB3IP-218ENST00000553099 PFKFB2O60825 505 aa10.71□□□□□ -0.69
RAB3IP-218ENST00000553099 XRCC6P12956 609 aaKnown RBP eCLIP10.71□□□□□ -0.69
RAB3IP-218ENST00000553099 CYP7A1P22680 504 aa10.71□□□□□ -0.69
RAB3IP-218ENST00000553099 TDO2P48775 406 aa10.71□□□□□ -0.69
RAB3IP-218ENST00000553099 IFFO2Q5TF58 517 aa10.71□□□□□ -0.69
RAB3IP-218ENST00000553099 FAM173BQ6P4H8 233 aa10.71□□□□□ -0.69
RAB3IP-218ENST00000553099 MB21D2Q8IYB1 491 aaPredicted RBP10.71□□□□□ -0.69
RAB3IP-218ENST00000553099 STK11IPQ8N1F8 1099 aa10.71□□□□□ -0.69
RAB3IP-218ENST00000553099 FAM84BQ96KN1 310 aaPredicted RBP10.71□□□□□ -0.69
RAB3IP-218ENST00000553099 AGXT2Q9BYV1 514 aa10.71□□□□□ -0.69
RAB3IP-218ENST00000553099 GRPEL1Q9HAV7 217 aa10.71□□□□□ -0.69
RAB3IP-218ENST00000553099 EPB41L4AQ9HCS5 686 aaPredicted RBP10.71□□□□□ -0.69
RAB3IP-218ENST00000553099 SLC4A4Q9Y6R1 1079 aa10.71□□□□□ -0.69
RAB3IP-218ENST00000553099 PRKAB2O43741 272 aa10.71□□□□□ -0.7
RAB3IP-218ENST00000553099 ADRA2BP18089 450 aa10.71□□□□□ -0.7
RAB3IP-218ENST00000553099 SLC51AQ86UW1 340 aa10.71□□□□□ -0.7
RAB3IP-218ENST00000553099 IFNL3Q8IZI9 196 aa10.71□□□□□ -0.7
RAB3IP-218ENST00000553099 PANK2Q9BZ23 570 aa10.71□□□□□ -0.7
RAB3IP-218ENST00000553099 NBPF3Q9H094 633 aa10.71□□□□□ -0.7
RAB3IP-218ENST00000553099 TMEM63CQ9P1W3 806 aa10.71□□□□□ -0.7
RAB3IP-218ENST00000553099 ANKIB1Q9P2G1 1089 aa10.71□□□□□ -0.7
RAB3IP-218ENST00000553099 KLF18A0A0U1RQI7 1052 aa10.7□□□□□ -0.7
RAB3IP-218ENST00000553099 PTPDC1A2A3K4 754 aa10.7□□□□□ -0.7
RAB3IP-218ENST00000553099 B4E1Z4 1266 aa10.7□□□□□ -0.7
RAB3IP-218ENST00000553099 PATL2C9JE40 543 aaKnown RBP10.7□□□□□ -0.7
RAB3IP-218ENST00000553099 PDIA3P30101 505 aaKnown RBP10.7□□□□□ -0.7
RAB3IP-218ENST00000553099 MRE11P49959 708 aa10.7□□□□□ -0.7
RAB3IP-218ENST00000553099 ANTXR2P58335 489 aa10.7□□□□□ -0.7
RAB3IP-218ENST00000553099 CTDSPL2Q05D32 466 aa10.7□□□□□ -0.7
RAB3IP-218ENST00000553099 CHAF1AQ13111 956 aaPredicted RBP10.7□□□□□ -0.7
RAB3IP-218ENST00000553099 ANKRD2Q9GZV1 360 aa10.7□□□□□ -0.7
RAB3IP-218ENST00000553099 TOMM22Q9NS69 142 aa10.7□□□□□ -0.7
RAB3IP-218ENST00000553099 JAG2Q9Y219 1238 aa10.7□□□□□ -0.7
RAB3IP-218ENST00000553099 GOLGA8BA8MQT2 603 aa10.7□□□□□ -0.7
RAB3IP-218ENST00000553099 GYS1P13807 737 aa10.7□□□□□ -0.7
RAB3IP-218ENST00000553099 SLC27A3Q5K4L6 730 aa10.7□□□□□ -0.7
RAB3IP-218ENST00000553099 PRR5LQ6MZQ0 368 aa10.7□□□□□ -0.7
RAB3IP-218ENST00000553099 ADGRA1Q86SQ6 560 aa10.7□□□□□ -0.7
RAB3IP-218ENST00000553099 NSUN7Q8NE18 718 aaKnown RBP10.7□□□□□ -0.7
RAB3IP-218ENST00000553099 RPGRQ92834 1020 aaKnown RBP10.7□□□□□ -0.7
RAB3IP-218ENST00000553099 BAZ2AQ9UIF9 1905 aaKnown RBP10.7□□□□□ -0.7
RAB3IP-218ENST00000553099 NEDD4P46934 1319 aa10.69□□□□□ -0.7
RAB3IP-218ENST00000553099 SYCE3A1L190 88 aa10.69□□□□□ -0.7
RAB3IP-218ENST00000553099 TM4SF1P30408 202 aa10.69□□□□□ -0.7
RAB3IP-218ENST00000553099 RRP12Q5JTH9 1297 aaKnown RBP10.69□□□□□ -0.7
RAB3IP-218ENST00000553099 SDR42E1Q8WUS8 393 aa10.69□□□□□ -0.7
RAB3IP-218ENST00000553099 ZNF274Q96GC6 653 aaPredicted RBP10.69□□□□□ -0.7
RAB3IP-218ENST00000553099 NACAP1Q9BZK3 213 aa10.69□□□□□ -0.7
RAB3IP-218ENST00000553099 INCENPQ9NQS7 918 aa10.69□□□□□ -0.7
RAB3IP-218ENST00000553099 GSG1L2A8MUP6 293 aa10.69□□□□□ -0.7
RAB3IP-218ENST00000553099 PDIA4P13667 645 aaKnown RBP10.69□□□□□ -0.7
RAB3IP-218ENST00000553099 HIBADHP31937 336 aaKnown RBP10.69□□□□□ -0.7
RAB3IP-218ENST00000553099 ST5P78524 1137 aa10.69□□□□□ -0.7
RAB3IP-218ENST00000553099 TXNRD1Q16881 649 aa10.69□□□□□ -0.7
RAB3IP-218ENST00000553099 ISY1Q9ULR0 285 aaKnown RBP10.69□□□□□ -0.7
RAB3IP-218ENST00000553099 CACNA1SQ13698 1873 aa10.69□□□□□ -0.7
RAB3IP-218ENST00000553099 CCDC88AQ3V6T2 1871 aa10.68□□□□□ -0.7
RAB3IP-218ENST00000553099 MAGEB6P1A0A0J9YX57 407 aa10.68□□□□□ -0.7
RAB3IP-218ENST00000553099 CTDNEP1O95476 244 aa10.68□□□□□ -0.7
RAB3IP-218ENST00000553099 SERPINB2P05120 415 aa10.68□□□□□ -0.7
RAB3IP-218ENST00000553099 GNAT2P19087 354 aa10.68□□□□□ -0.7
RAB3IP-218ENST00000553099 KRT85P78386 507 aa10.68□□□□□ -0.7
RAB3IP-218ENST00000553099 HMGN5P82970 282 aaKnown RBP10.68□□□□□ -0.7
RAB3IP-218ENST00000553099 GRAPQ13588 217 aa10.68□□□□□ -0.7
RAB3IP-218ENST00000553099 CYB5R4Q7L1T6 521 aa10.68□□□□□ -0.7
RAB3IP-218ENST00000553099 TXNRD3Q86VQ6 643 aa10.68□□□□□ -0.7
RAB3IP-218ENST00000553099 SMARCC2Q8TAQ2 1214 aa10.68□□□□□ -0.7
RAB3IP-218ENST00000553099 NKX2-3Q8TAU0 364 aa10.68□□□□□ -0.7
RAB3IP-218ENST00000553099 GRAPLQ8TC17 118 aaPredicted RBP10.68□□□□□ -0.7
RAB3IP-218ENST00000553099 LLPHQ9BRT6 129 aaKnown RBP10.68□□□□□ -0.7
RAB3IP-218ENST00000553099 TAOK2Q9UL54 1235 aa10.68□□□□□ -0.7
RAB3IP-218ENST00000553099 CPLX1O14810 134 aa10.68□□□□□ -0.7
RAB3IP-218ENST00000553099 CSPP1Q1MSJ5 1256 aa10.68□□□□□ -0.7
RAB3IP-218ENST00000553099 NAA16Q6N069 864 aaPredicted RBP10.68□□□□□ -0.7
RAB3IP-218ENST00000553099 KIF3AQ9Y496 699 aa10.68□□□□□ -0.7
RAB3IP-218ENST00000553099 PNPLA7Q6ZV29 1317 aa10.67□□□□□ -0.7
RAB3IP-218ENST00000553099 KDM4AO75164 1064 aa10.67□□□□□ -0.7
RAB3IP-218ENST00000553099 RXRAP19793 462 aa10.67□□□□□ -0.7
RAB3IP-218ENST00000553099 GUCY1B3Q02153 619 aa10.67□□□□□ -0.7
RAB3IP-218ENST00000553099 FBXO33Q7Z6M2 555 aa10.67□□□□□ -0.7
RAB3IP-218ENST00000553099 TMEM87AQ8NBN3 555 aa10.67□□□□□ -0.7
RAB3IP-218ENST00000553099 SYAP1Q96A49 352 aaPredicted RBP10.67□□□□□ -0.7
RAB3IP-218ENST00000553099 ANGEL1Q9UNK9 670 aaKnown RBP10.67□□□□□ -0.7
RAB3IP-218ENST00000553099 MINDY4BA8MYZ0 360 aa10.67□□□□□ -0.7
RAB3IP-218ENST00000553099 ZNF445P59923 1031 aa10.67□□□□□ -0.7
RAB3IP-218ENST00000553099 UBE2HP62256 183 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms