RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 FAM98CQ17RN3 349 aaKnown RBP8.56□□□□□ -1.04
BEST3-212ENST00000553096 ERO1AQ96HE7 468 aa8.56□□□□□ -1.04
BEST3-212ENST00000553096 CHMP3Q9Y3E7 222 aa8.56□□□□□ -1.04
BEST3-212ENST00000553096 DOCK2Q92608 1830 aa8.56□□□□□ -1.04
BEST3-212ENST00000553096 TAF1P21675 1872 aa8.56□□□□□ -1.04
BEST3-212ENST00000553096 ATRNO75882 1429 aa8.56□□□□□ -1.04
BEST3-212ENST00000553096 TTC36A6NLP5 189 aa8.56□□□□□ -1.04
BEST3-212ENST00000553096 GSDMDP57764 484 aa8.56□□□□□ -1.04
BEST3-212ENST00000553096 LRMPQ12912 555 aa8.56□□□□□ -1.04
BEST3-212ENST00000553096 TCIRG1Q13488 830 aa8.56□□□□□ -1.04
BEST3-212ENST00000553096 PTPN14Q15678 1187 aa8.56□□□□□ -1.04
BEST3-212ENST00000553096 ATL3Q6DD88 541 aa8.56□□□□□ -1.04
BEST3-212ENST00000553096 CCDC129Q6ZRS4 1044 aa8.56□□□□□ -1.04
BEST3-212ENST00000553096 LRRC8AQ8IWT6 810 aa8.56□□□□□ -1.04
BEST3-212ENST00000553096 KIF18AQ8NI77 898 aa8.56□□□□□ -1.04
BEST3-212ENST00000553096 SEC62Q99442 399 aaKnown RBP8.56□□□□□ -1.04
BEST3-212ENST00000553096 HAUS7Q99871 368 aa8.56□□□□□ -1.04
BEST3-212ENST00000553096 RFX7Q2KHR2 1363 aa8.55□□□□□ -1.04
BEST3-212ENST00000553096 CYP19A1P11511 503 aaPredicted RBP8.55□□□□□ -1.04
BEST3-212ENST00000553096 VPS72Q15906 364 aa8.55□□□□□ -1.04
BEST3-212ENST00000553096 FERMT3Q86UX7 667 aa8.55□□□□□ -1.04
BEST3-212ENST00000553096 CACTINQ8WUQ7 758 aaKnown RBP8.55□□□□□ -1.04
BEST3-212ENST00000553096 ZNF330Q9Y3S2 320 aaPredicted RBP8.55□□□□□ -1.04
BEST3-212ENST00000553096 PALLDQ8WX93 1383 aa8.55□□□□□ -1.04
BEST3-212ENST00000553096 GOLIM4O00461 696 aa8.55□□□□□ -1.04
BEST3-212ENST00000553096 SGSM3Q96HU1 749 aa8.55□□□□□ -1.04
BEST3-212ENST00000553096 DNAJC25Q9H1X3 360 aa8.55□□□□□ -1.04
BEST3-212ENST00000553096 ZBTB12Q9Y330 459 aaPredicted RBP8.55□□□□□ -1.04
BEST3-212ENST00000553096 CHD4Q14839 1912 aa8.55□□□□□ -1.04
BEST3-212ENST00000553096 MAP3K15Q6ZN16 1313 aa8.54□□□□□ -1.04
BEST3-212ENST00000553096 ZNF831Q5JPB2 1677 aa8.54□□□□□ -1.04
BEST3-212ENST00000553096 NRDCO43847 1150 aa8.54□□□□□ -1.04
BEST3-212ENST00000553096 TIMM10P62072 90 aa8.54□□□□□ -1.04
BEST3-212ENST00000553096 DDX46Q7L014 1031 aaKnown RBP8.54□□□□□ -1.04
BEST3-212ENST00000553096 FAM89AQ96GI7 184 aa8.54□□□□□ -1.04
BEST3-212ENST00000553096 NRBP1Q9UHY1 535 aa8.54□□□□□ -1.04
BEST3-212ENST00000553096 ZBTB1Q9Y2K1 713 aa8.54□□□□□ -1.04
BEST3-212ENST00000553096 BECN2A8MW95 431 aa8.54□□□□□ -1.04
BEST3-212ENST00000553096 H3BQV1 296 aa8.54□□□□□ -1.04
BEST3-212ENST00000553096 EYA2O00167 538 aa8.54□□□□□ -1.04
BEST3-212ENST00000553096 NR1I2O75469 434 aa8.54□□□□□ -1.04
BEST3-212ENST00000553096 TAF5LO75529 589 aa8.54□□□□□ -1.04
BEST3-212ENST00000553096 RESTQ13127 1097 aa8.54□□□□□ -1.04
BEST3-212ENST00000553096 FAM182BQ5T319 152 aa8.54□□□□□ -1.04
BEST3-212ENST00000553096 IFFO2Q5TF58 517 aa8.54□□□□□ -1.04
BEST3-212ENST00000553096 NYAP1Q6ZVC0 841 aa8.54□□□□□ -1.04
BEST3-212ENST00000553096 FAM177A1Q8N128 213 aaPredicted RBP8.54□□□□□ -1.04
BEST3-212ENST00000553096 LLPHQ9BRT6 129 aaKnown RBP8.54□□□□□ -1.04
BEST3-212ENST00000553096 NAT10Q9H0A0 1025 aaKnown RBP8.54□□□□□ -1.04
BEST3-212ENST00000553096 ANO10Q9NW15 660 aa8.54□□□□□ -1.04
BEST3-212ENST00000553096 IMPACTQ9P2X3 320 aa8.54□□□□□ -1.04
BEST3-212ENST00000553096 ECM29Q5VYK3 1845 aa8.54□□□□□ -1.04
BEST3-212ENST00000553096 SPATA31A1Q5TZJ5 1347 aa8.54□□□□□ -1.04
BEST3-212ENST00000553096 TRIM28Q13263 835 aaKnown RBP8.53□□□□□ -1.04
BEST3-212ENST00000553096 TOB2Q14106 344 aaPredicted RBP8.53□□□□□ -1.04
BEST3-212ENST00000553096 IQCB1Q15051 598 aa8.53□□□□□ -1.04
BEST3-212ENST00000553096 CCDC73Q6ZRK6 1079 aa8.53□□□□□ -1.04
BEST3-212ENST00000553096 SEPT12Q8IYM1 358 aa8.53□□□□□ -1.04
BEST3-212ENST00000553096 GTF3C6Q969F1 213 aa8.53□□□□□ -1.04
BEST3-212ENST00000553096 CCDC85AQ96PX6 553 aaPredicted RBP8.53□□□□□ -1.04
BEST3-212ENST00000553096 TFIP11Q9UBB9 837 aaKnown RBP8.53□□□□□ -1.04
BEST3-212ENST00000553096 UBN2Q6ZU65 1347 aa8.53□□□□□ -1.04
BEST3-212ENST00000553096 CIAO1O76071 339 aa8.53□□□□□ -1.04
BEST3-212ENST00000553096 SLU7O95391 586 aaKnown RBP8.53□□□□□ -1.04
BEST3-212ENST00000553096 PCCAP05165 728 aaPredicted RBP8.53□□□□□ -1.04
BEST3-212ENST00000553096 SKILP12757 684 aa8.53□□□□□ -1.04
BEST3-212ENST00000553096 ADORA1P30542 326 aa8.53□□□□□ -1.04
BEST3-212ENST00000553096 USPL1Q5W0Q7 1092 aa8.53□□□□□ -1.04
BEST3-212ENST00000553096 NAA16Q6N069 864 aaPredicted RBP8.53□□□□□ -1.04
BEST3-212ENST00000553096 GIGYF2Q6Y7W6 1299 aaKnown RBP8.53□□□□□ -1.04
BEST3-212ENST00000553096 CEP57L1Q8IYX8 460 aa8.53□□□□□ -1.04
BEST3-212ENST00000553096 PGBD1Q96JS3 809 aa8.53□□□□□ -1.04
BEST3-212ENST00000553096 PLA2G12BQ9BX93 195 aa8.53□□□□□ -1.04
BEST3-212ENST00000553096 GPR108Q9NPR9 543 aa8.53□□□□□ -1.04
BEST3-212ENST00000553096 A0A0G2JLW4 131 aa8.53□□□□□ -1.04
BEST3-212ENST00000553096 CSF1RP07333 972 aa8.53□□□□□ -1.04
BEST3-212ENST00000553096 SLFN14P0C7P3 912 aa8.53□□□□□ -1.04
BEST3-212ENST00000553096 GPTP24298 496 aa8.53□□□□□ -1.04
BEST3-212ENST00000553096 IL15P40933 162 aaPredicted RBP8.53□□□□□ -1.04
BEST3-212ENST00000553096 KCNJ6P48051 423 aa8.53□□□□□ -1.04
BEST3-212ENST00000553096 MAP2K1Q02750 393 aaPredicted RBP8.53□□□□□ -1.04
BEST3-212ENST00000553096 CCDC144BQ3MJ40 725 aa8.53□□□□□ -1.04
BEST3-212ENST00000553096 CT47A1Q5JQC4 288 aaPredicted RBP8.53□□□□□ -1.04
BEST3-212ENST00000553096 NLRP10Q86W26 655 aa8.53□□□□□ -1.04
BEST3-212ENST00000553096 CCDC144CPQ8IYA2 1237 aa8.53□□□□□ -1.04
BEST3-212ENST00000553096 TCEANC2Q96MN5 208 aa8.53□□□□□ -1.04
BEST3-212ENST00000553096 ZNF396Q96N95 335 aaPredicted RBP8.53□□□□□ -1.04
BEST3-212ENST00000553096 SPATA31A5Q5VU36 1347 aa8.52□□□□□ -1.05
BEST3-212ENST00000553096 SPATA31A7Q8IWB4 1347 aa8.52□□□□□ -1.05
BEST3-212ENST00000553096 SH3TC1Q8TE82 1336 aa8.52□□□□□ -1.05
BEST3-212ENST00000553096 A0A1B0GUL7 405 aa8.52□□□□□ -1.05
BEST3-212ENST00000553096 TERF2Q15554 542 aa8.52□□□□□ -1.05
BEST3-212ENST00000553096 FAM173BQ6P4H8 233 aa8.52□□□□□ -1.05
BEST3-212ENST00000553096 DNAJC14Q6Y2X3 702 aaPredicted RBP8.52□□□□□ -1.05
BEST3-212ENST00000553096 KIF6Q6ZMV9 814 aa8.52□□□□□ -1.05
BEST3-212ENST00000553096 ZBTB38Q8NAP3 1195 aaPredicted RBP8.52□□□□□ -1.05
BEST3-212ENST00000553096 BORCS6Q96GS4 357 aa8.52□□□□□ -1.05
BEST3-212ENST00000553096 FAM53CQ9NYF3 392 aa8.52□□□□□ -1.05
BEST3-212ENST00000553096 SCN7AQ01118 1682 aa8.52□□□□□ -1.05
BEST3-212ENST00000553096 BTAF1O14981 1849 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms