RNA–Protein interactions for RNA: ENST00000552773.1

RFX4-210, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 1,659 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-210ENST00000552773 ZNF532Q9HCE3 1301 aa12.14□□□□□ -0.47
RFX4-210ENST00000552773 CAMTA2O94983 1202 aa12.14□□□□□ -0.47
RFX4-210ENST00000552773 CCT2P78371 535 aaKnown RBP12.14□□□□□ -0.47
RFX4-210ENST00000552773 TYRO3Q06418 890 aa12.14□□□□□ -0.47
RFX4-210ENST00000552773 CAVIN4Q5BKX8 364 aa12.14□□□□□ -0.47
RFX4-210ENST00000552773 SUSD4Q5VX71 490 aa12.14□□□□□ -0.47
RFX4-210ENST00000552773 GIMAP6Q6P9H5 292 aa12.14□□□□□ -0.47
RFX4-210ENST00000552773 RTEL1Q9NZ71 1219 aa12.14□□□□□ -0.47
RFX4-210ENST00000552773 ORC3Q9UBD5 711 aaPredicted RBP12.14□□□□□ -0.47
RFX4-210ENST00000552773 LAMA4Q16363 1823 aa12.14□□□□□ -0.47
RFX4-210ENST00000552773 UBN2Q6ZU65 1347 aa12.14□□□□□ -0.47
RFX4-210ENST00000552773 GOLGA6L19H0YKK7 550 aa12.13□□□□□ -0.47
RFX4-210ENST00000552773 ADCY5O95622 1261 aa12.13□□□□□ -0.47
RFX4-210ENST00000552773 METAP2P50579 478 aaKnown RBP eCLIP12.13□□□□□ -0.47
RFX4-210ENST00000552773 FAM160A1Q05DH4 1040 aa12.13□□□□□ -0.47
RFX4-210ENST00000552773 UBE4AQ14139 1066 aa12.13□□□□□ -0.47
RFX4-210ENST00000552773 SCARF1Q14162 830 aa12.13□□□□□ -0.47
RFX4-210ENST00000552773 ANKRD18AQ8IVF6 992 aa12.13□□□□□ -0.47
RFX4-210ENST00000552773 FBXO18Q8NFZ0 1043 aa12.13□□□□□ -0.47
RFX4-210ENST00000552773 STRBPQ96SI9 672 aaKnown RBP12.13□□□□□ -0.47
RFX4-210ENST00000552773 LRRC2Q9BYS8 371 aa12.13□□□□□ -0.47
RFX4-210ENST00000552773 POLR3EQ9NVU0 708 aa12.13□□□□□ -0.47
RFX4-210ENST00000552773 TFIP11Q9UBB9 837 aaKnown RBP12.13□□□□□ -0.47
RFX4-210ENST00000552773 LAMB2P55268 1798 aa12.13□□□□□ -0.47
RFX4-210ENST00000552773 STK36Q9NRP7 1315 aa12.13□□□□□ -0.47
RFX4-210ENST00000552773 CTDNEP1O95476 244 aa12.13□□□□□ -0.47
RFX4-210ENST00000552773 TPM4P67936 248 aa12.13□□□□□ -0.47
RFX4-210ENST00000552773 SF3B3Q15393 1217 aaKnown RBP12.13□□□□□ -0.47
RFX4-210ENST00000552773 STX1AQ16623 288 aa12.13□□□□□ -0.47
RFX4-210ENST00000552773 RC3H1Q5TC82 1133 aaKnown RBP12.13□□□□□ -0.47
RFX4-210ENST00000552773 ADALQ6DHV7 355 aa12.13□□□□□ -0.47
RFX4-210ENST00000552773 SGMS1Q86VZ5 419 aa12.13□□□□□ -0.47
RFX4-210ENST00000552773 ANO10Q9NW15 660 aa12.13□□□□□ -0.47
RFX4-210ENST00000552773 CNTNAP4Q9C0A0 1308 aa12.12□□□□□ -0.47
RFX4-210ENST00000552773 A0A0G2JS52 829 aa12.12□□□□□ -0.47
RFX4-210ENST00000552773 CCDC69A6NI79 296 aa12.12□□□□□ -0.47
RFX4-210ENST00000552773 ZBTB43O43298 467 aa12.12□□□□□ -0.47
RFX4-210ENST00000552773 ADAMTS2O95450 1211 aa12.12□□□□□ -0.47
RFX4-210ENST00000552773 NTSR2O95665 410 aa12.12□□□□□ -0.47
RFX4-210ENST00000552773 PHKA1P46020 1223 aa12.12□□□□□ -0.47
RFX4-210ENST00000552773 ME1P48163 572 aa12.12□□□□□ -0.47
RFX4-210ENST00000552773 GNL2Q13823 731 aaKnown RBP12.12□□□□□ -0.47
RFX4-210ENST00000552773 STK38Q15208 465 aa12.12□□□□□ -0.47
RFX4-210ENST00000552773 SAFBQ15424 915 aaKnown RBP eCLIP12.12□□□□□ -0.47
RFX4-210ENST00000552773 TTLL5Q6EMB2 1281 aa12.12□□□□□ -0.47
RFX4-210ENST00000552773 NFXL1Q6ZNB6 911 aa12.12□□□□□ -0.47
RFX4-210ENST00000552773 MFSD6Q6ZSS7 791 aa12.12□□□□□ -0.47
RFX4-210ENST00000552773 CCAR1Q8IX12 1150 aaKnown RBP12.12□□□□□ -0.47
RFX4-210ENST00000552773 TRIM22Q8IYM9 498 aa12.12□□□□□ -0.47
RFX4-210ENST00000552773 MRPS27Q92552 414 aaKnown RBP12.12□□□□□ -0.47
RFX4-210ENST00000552773 PIH1D3Q9NQM4 214 aaKnown RBP12.12□□□□□ -0.47
RFX4-210ENST00000552773 LRP2BPQ9P2M1 347 aa12.12□□□□□ -0.47
RFX4-210ENST00000552773 DENND2AQ9ULE3 1009 aa12.12□□□□□ -0.47
RFX4-210ENST00000552773 SLIT2O94813 1529 aa12.12□□□□□ -0.47
RFX4-210ENST00000552773 PDS5AQ29RF7 1337 aaKnown RBP12.12□□□□□ -0.47
RFX4-210ENST00000552773 TCRBV5S4A2TA0A5A2 114 aa12.11□□□□□ -0.47
RFX4-210ENST00000552773 SH2B2O14492 632 aaPredicted RBP12.11□□□□□ -0.47
RFX4-210ENST00000552773 XBP1P17861 261 aa12.11□□□□□ -0.47
RFX4-210ENST00000552773 LIG1P18858 919 aa12.11□□□□□ -0.47
RFX4-210ENST00000552773 GTF2E1P29083 439 aaPredicted RBP12.11□□□□□ -0.47
RFX4-210ENST00000552773 HAND2P61296 217 aa12.11□□□□□ -0.47
RFX4-210ENST00000552773 AKNAD1Q5T1N1 836 aa12.11□□□□□ -0.47
RFX4-210ENST00000552773 IFNL3Q8IZI9 196 aa12.11□□□□□ -0.47
RFX4-210ENST00000552773 MARCH10Q8NA82 808 aaPredicted RBP12.11□□□□□ -0.47
RFX4-210ENST00000552773 CCDC34Q96HJ3 373 aa12.11□□□□□ -0.47
RFX4-210ENST00000552773 BCL11BQ9C0K0 894 aaPredicted RBP12.11□□□□□ -0.47
RFX4-210ENST00000552773 ANKRD2Q9GZV1 360 aa12.11□□□□□ -0.47
RFX4-210ENST00000552773 BSDC1Q9NW68 430 aaPredicted RBP12.11□□□□□ -0.47
RFX4-210ENST00000552773 HOOK1Q9UJC3 728 aaKnown RBP12.11□□□□□ -0.47
RFX4-210ENST00000552773 SLC12A7Q9Y666 1083 aa12.11□□□□□ -0.47
RFX4-210ENST00000552773 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.11□□□□□ -0.47
RFX4-210ENST00000552773 AKAP11Q9UKA4 1901 aa12.11□□□□□ -0.47
RFX4-210ENST00000552773 IARSP41252 1262 aaKnown RBP12.1□□□□□ -0.47
RFX4-210ENST00000552773 TDO2P48775 406 aa12.1□□□□□ -0.47
RFX4-210ENST00000552773 TMEM67Q5HYA8 995 aa12.1□□□□□ -0.47
RFX4-210ENST00000552773 SLC10A5Q5PT55 438 aa12.1□□□□□ -0.47
RFX4-210ENST00000552773 VPS37DQ86XT2 251 aa12.1□□□□□ -0.47
RFX4-210ENST00000552773 MAGEB6Q8N7X4 407 aa12.1□□□□□ -0.47
RFX4-210ENST00000552773 STAG1Q8WVM7 1258 aa12.1□□□□□ -0.47
RFX4-210ENST00000552773 NID2Q14112 1375 aa12.1□□□□□ -0.47
RFX4-210ENST00000552773 NEMFO60524 1076 aa12.1□□□□□ -0.47
RFX4-210ENST00000552773 CHGBP05060 677 aa12.1□□□□□ -0.47
RFX4-210ENST00000552773 SLC3A2P08195 630 aaKnown RBP12.1□□□□□ -0.47
RFX4-210ENST00000552773 ZNF165P49910 485 aa12.1□□□□□ -0.47
RFX4-210ENST00000552773 SSRP1Q08945 709 aaKnown RBP12.1□□□□□ -0.47
RFX4-210ENST00000552773 VPS72Q15906 364 aa12.1□□□□□ -0.47
RFX4-210ENST00000552773 CEP57L1Q8IYX8 460 aa12.1□□□□□ -0.47
RFX4-210ENST00000552773 TDRD7Q8NHU6 1098 aaKnown RBP12.1□□□□□ -0.47
RFX4-210ENST00000552773 PGBD1Q96JS3 809 aa12.1□□□□□ -0.47
RFX4-210ENST00000552773 MRVI1Q9Y6F6 885 aa12.1□□□□□ -0.47
RFX4-210ENST00000552773 LTBP4Q8N2S1 1624 aa12.09□□□□□ -0.47
RFX4-210ENST00000552773 KAT6BQ8WYB5 2073 aa12.09□□□□□ -0.47
RFX4-210ENST00000552773 BECN2A8MW95 431 aa12.09□□□□□ -0.47
RFX4-210ENST00000552773 IFIT3O14879 490 aaKnown RBP12.09□□□□□ -0.47
RFX4-210ENST00000552773 FOXP2O15409 715 aa12.09□□□□□ -0.47
RFX4-210ENST00000552773 PPP6R2O75170 966 aa12.09□□□□□ -0.47
RFX4-210ENST00000552773 MBD4O95243 580 aa12.09□□□□□ -0.47
RFX4-210ENST00000552773 CALM1P0DP23 149 aa12.09□□□□□ -0.47
RFX4-210ENST00000552773 CALM2P0DP24 149 aa12.09□□□□□ -0.47
RFX4-210ENST00000552773 CALM3P0DP25 149 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms