RNA–Protein interactions for RNA: ENST00000552608.6

LINC00661-206, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 1,130 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-206ENST00000552608 SGIP1Q9BQI5 828 aa13.07□□□□□ -0.32
LINC00661-206ENST00000552608 NOL10Q9BSC4 688 aaKnown RBP13.07□□□□□ -0.32
LINC00661-206ENST00000552608 PUS7LQ9H0K6 701 aaKnown RBP13.07□□□□□ -0.32
LINC00661-206ENST00000552608 VPS33BQ9H267 617 aa13.07□□□□□ -0.32
LINC00661-206ENST00000552608 SPON1Q9HCB6 807 aa13.07□□□□□ -0.32
LINC00661-206ENST00000552608 PPP1R1BQ9UD71 204 aaPredicted RBP13.07□□□□□ -0.32
LINC00661-206ENST00000552608 FAM205AQ6ZU69 1335 aa13.07□□□□□ -0.32
LINC00661-206ENST00000552608 LAMA4Q16363 1823 aa13.06□□□□□ -0.32
LINC00661-206ENST00000552608 MYH2Q9UKX2 1941 aa13.06□□□□□ -0.32
LINC00661-206ENST00000552608 SLC27A2O14975 620 aa13.06□□□□□ -0.32
LINC00661-206ENST00000552608 CHGBP05060 677 aa13.06□□□□□ -0.32
LINC00661-206ENST00000552608 MCM2P49736 904 aa13.06□□□□□ -0.32
LINC00661-206ENST00000552608 DALRD3Q5D0E6 543 aaKnown RBP13.06□□□□□ -0.32
LINC00661-206ENST00000552608 CERS3Q8IU89 383 aa13.06□□□□□ -0.32
LINC00661-206ENST00000552608 KCNB2Q92953 911 aa13.06□□□□□ -0.32
LINC00661-206ENST00000552608 KIF2CQ99661 725 aa13.06□□□□□ -0.32
LINC00661-206ENST00000552608 NACAP1Q9BZK3 213 aa13.06□□□□□ -0.32
LINC00661-206ENST00000552608 TM6SF1Q9BZW5 370 aa13.06□□□□□ -0.32
LINC00661-206ENST00000552608 SUGT1Q9Y2Z0 365 aa13.06□□□□□ -0.32
LINC00661-206ENST00000552608 SNX14Q9Y5W7 946 aa13.06□□□□□ -0.32
LINC00661-206ENST00000552608 PSME4Q14997 1843 aa13.05□□□□□ -0.32
LINC00661-206ENST00000552608 ARFGEF1Q9Y6D6 1849 aa13.05□□□□□ -0.32
LINC00661-206ENST00000552608 MAGEB6P1A0A0J9YX57 407 aa13.05□□□□□ -0.32
LINC00661-206ENST00000552608 MBD4O95243 580 aa13.05□□□□□ -0.32
LINC00661-206ENST00000552608 IMMTQ16891 758 aaKnown RBP13.05□□□□□ -0.32
LINC00661-206ENST00000552608 OLFM4Q6UX06 510 aa13.05□□□□□ -0.32
LINC00661-206ENST00000552608 SLC51AQ86UW1 340 aa13.05□□□□□ -0.32
LINC00661-206ENST00000552608 NSUN4Q96CB9 384 aaKnown RBP13.05□□□□□ -0.32
LINC00661-206ENST00000552608 PSMD1Q99460 953 aa13.05□□□□□ -0.32
LINC00661-206ENST00000552608 PALD1Q9ULE6 856 aa13.05□□□□□ -0.32
LINC00661-206ENST00000552608 ZMYM6O95789 1325 aa13.05□□□□□ -0.32
LINC00661-206ENST00000552608 FER1L6Q2WGJ9 1857 aa13.04□□□□□ -0.32
LINC00661-206ENST00000552608 BAG3O95817 575 aa13.04□□□□□ -0.32
LINC00661-206ENST00000552608 APPP05067 770 aa13.04□□□□□ -0.32
LINC00661-206ENST00000552608 KCNA3P22001 575 aa13.04□□□□□ -0.32
LINC00661-206ENST00000552608 PTGER2P43116 358 aa13.04□□□□□ -0.32
LINC00661-206ENST00000552608 NEK4P51957 841 aa13.04□□□□□ -0.32
LINC00661-206ENST00000552608 GTF2IP78347 998 aa13.04□□□□□ -0.32
LINC00661-206ENST00000552608 MECOMQ03112 1051 aa13.04□□□□□ -0.32
LINC00661-206ENST00000552608 KIAA2012Q0VF49 1180 aa13.04□□□□□ -0.32
LINC00661-206ENST00000552608 TSGA10IPQ3SY00 556 aa13.04□□□□□ -0.32
LINC00661-206ENST00000552608 SLFNL1Q499Z3 407 aa13.04□□□□□ -0.32
LINC00661-206ENST00000552608 MFSD14BQ5SR56 506 aa13.04□□□□□ -0.32
LINC00661-206ENST00000552608 FBXW7Q969H0 707 aa13.04□□□□□ -0.32
LINC00661-206ENST00000552608 STRBPQ96SI9 672 aaKnown RBP13.04□□□□□ -0.32
LINC00661-206ENST00000552608 SNED1Q8TER0 1413 aa13.04□□□□□ -0.32
LINC00661-206ENST00000552608 PATL2C9JE40 543 aaKnown RBP13.03□□□□□ -0.32
LINC00661-206ENST00000552608 PPIP5K2O43314 1243 aa13.03□□□□□ -0.32
LINC00661-206ENST00000552608 ECE2O60344 883 aa13.03□□□□□ -0.32
LINC00661-206ENST00000552608 PRDX5P30044 214 aa13.03□□□□□ -0.32
LINC00661-206ENST00000552608 FKBP1AP62942 108 aaKnown RBP13.03□□□□□ -0.32
LINC00661-206ENST00000552608 DOK7Q18PE1 504 aa13.03□□□□□ -0.32
LINC00661-206ENST00000552608 VPS53Q5VIR6 699 aa13.03□□□□□ -0.32
LINC00661-206ENST00000552608 TTLL5Q6EMB2 1281 aa13.03□□□□□ -0.32
LINC00661-206ENST00000552608 JAKMIP1Q96N16 626 aaKnown RBP13.03□□□□□ -0.32
LINC00661-206ENST00000552608 TBC1D2Q9BYX2 928 aa13.03□□□□□ -0.32
LINC00661-206ENST00000552608 ARMT1Q9H993 441 aa13.03□□□□□ -0.32
LINC00661-206ENST00000552608 JAG2Q9Y219 1238 aa13.03□□□□□ -0.32
LINC00661-206ENST00000552608 CYP46A1Q9Y6A2 500 aa13.03□□□□□ -0.32
LINC00661-206ENST00000552608 SLC4A4Q9Y6R1 1079 aa13.03□□□□□ -0.32
LINC00661-206ENST00000552608 K7ELQ4 463 aaPredicted RBP13.02□□□□□ -0.33
LINC00661-206ENST00000552608 ZNF213O14771 459 aa13.02□□□□□ -0.33
LINC00661-206ENST00000552608 HMGB1P09429 215 aaKnown RBP13.02□□□□□ -0.33
LINC00661-206ENST00000552608 ALX1Q15699 326 aa13.02□□□□□ -0.33
LINC00661-206ENST00000552608 BLOC1S2Q6QNY1 142 aa13.02□□□□□ -0.33
LINC00661-206ENST00000552608 RASEFQ8IZ41 740 aa13.02□□□□□ -0.33
LINC00661-206ENST00000552608 LCORLQ8N3X6 602 aa13.02□□□□□ -0.33
LINC00661-206ENST00000552608 MIGA1Q8NAN2 632 aa13.02□□□□□ -0.33
LINC00661-206ENST00000552608 CRNKL1Q9BZJ0 848 aaKnown RBP13.02□□□□□ -0.33
LINC00661-206ENST00000552608 NAPBQ9H115 298 aa13.02□□□□□ -0.33
LINC00661-206ENST00000552608 DBNDD1Q9H9R9 158 aa13.02□□□□□ -0.33
LINC00661-206ENST00000552608 FGAP02671 866 aa13.01□□□□□ -0.33
LINC00661-206ENST00000552608 CYP21A2P08686 494 aa13.01□□□□□ -0.33
LINC00661-206ENST00000552608 PLCG2P16885 1265 aa13.01□□□□□ -0.33
LINC00661-206ENST00000552608 CASTP20810 708 aaKnown RBP13.01□□□□□ -0.33
LINC00661-206ENST00000552608 TDO2P48775 406 aa13.01□□□□□ -0.33
LINC00661-206ENST00000552608 AOC3Q16853 763 aa13.01□□□□□ -0.33
LINC00661-206ENST00000552608 STRIP1Q5VSL9 837 aa13.01□□□□□ -0.33
LINC00661-206ENST00000552608 GIMAP6Q6P9H5 292 aa13.01□□□□□ -0.33
LINC00661-206ENST00000552608 IFNL3Q8IZI9 196 aa13.01□□□□□ -0.33
LINC00661-206ENST00000552608 NEK1Q96PY6 1258 aa13.01□□□□□ -0.33
LINC00661-206ENST00000552608 ZSWIM6Q9HCJ5 1215 aa13.01□□□□□ -0.33
LINC00661-206ENST00000552608 MROH7-TTC4A0A0A0MT08 1334 aa13.01□□□□□ -0.33
LINC00661-206ENST00000552608 LAMB1P07942 1786 aa13.01□□□□□ -0.33
LINC00661-206ENST00000552608 NAV1Q8NEY1 1877 aa13.01□□□□□ -0.33
LINC00661-206ENST00000552608 ZNF646O15015 1829 aaPredicted RBP13□□□□□ -0.33
LINC00661-206ENST00000552608 MYO3BQ8WXR4 1341 aa13□□□□□ -0.33
LINC00661-206ENST00000552608 USP17L3A6NCW0 530 aa13□□□□□ -0.33
LINC00661-206ENST00000552608 USP17L4A6NCW7 530 aa13□□□□□ -0.33
LINC00661-206ENST00000552608 HSP90AA1P07900 732 aaKnown RBP13□□□□□ -0.33
LINC00661-206ENST00000552608 TRDNQ13061 729 aa13□□□□□ -0.33
LINC00661-206ENST00000552608 ANKRD1Q15327 319 aa13□□□□□ -0.33
LINC00661-206ENST00000552608 RUFY3Q7L099 469 aa13□□□□□ -0.33
LINC00661-206ENST00000552608 USP17L1Q7RTZ2 530 aa13□□□□□ -0.33
LINC00661-206ENST00000552608 LARGE2Q8N3Y3 721 aa13□□□□□ -0.33
LINC00661-206ENST00000552608 RIOK1Q9BRS2 568 aaKnown RBP13□□□□□ -0.33
LINC00661-206ENST00000552608 TAOK3Q9H2K8 898 aa13□□□□□ -0.33
LINC00661-206ENST00000552608 AATFQ9NY61 560 aaKnown RBP eCLIP13□□□□□ -0.33
LINC00661-206ENST00000552608 TIAM2Q8IVF5 1701 aa12.99□□□□□ -0.33
LINC00661-206ENST00000552608 IARSP41252 1262 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms