RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 CCDC191Q8NCU4 936 aa6.29□□□□□ -1.4
CCNT1-204ENST00000551989 KCNG4Q8TDN1 519 aa6.29□□□□□ -1.4
CCNT1-204ENST00000551989 BRF1Q92994 677 aa6.29□□□□□ -1.4
CCNT1-204ENST00000551989 CHAMP1Q96JM3 812 aa6.29□□□□□ -1.4
CCNT1-204ENST00000551989 FEZ1Q99689 392 aa6.29□□□□□ -1.4
CCNT1-204ENST00000551989 MYD88Q99836 296 aa6.29□□□□□ -1.4
CCNT1-204ENST00000551989 CBX8Q9HC52 389 aa6.29□□□□□ -1.4
CCNT1-204ENST00000551989 RABGEF1Q9UJ41 708 aa6.29□□□□□ -1.4
CCNT1-204ENST00000551989 DBNLQ9UJU6 430 aaKnown RBP6.29□□□□□ -1.4
CCNT1-204ENST00000551989 AKAP2Q9Y2D5 859 aa6.29□□□□□ -1.4
CCNT1-204ENST00000551989 NUP98P52948 1817 aa6.29□□□□□ -1.4
CCNT1-204ENST00000551989 MAP3K15Q6ZN16 1313 aa6.28□□□□□ -1.4
CCNT1-204ENST00000551989 PCDH11XQ9BZA7 1347 aa6.28□□□□□ -1.4
CCNT1-204ENST00000551989 PCDH11YQ9BZA8 1340 aa6.28□□□□□ -1.4
CCNT1-204ENST00000551989 TOGARAM1Q9Y4F4 1720 aa6.28□□□□□ -1.4
CCNT1-204ENST00000551989 ERVV-2B6SEH9 535 aa6.28□□□□□ -1.4
CCNT1-204ENST00000551989 ITGBL1O95965 494 aaPredicted RBP6.28□□□□□ -1.4
CCNT1-204ENST00000551989 CYP21A2P08686 494 aa6.28□□□□□ -1.4
CCNT1-204ENST00000551989 CPA1P15085 419 aa6.28□□□□□ -1.4
CCNT1-204ENST00000551989 LIG1P18858 919 aa6.28□□□□□ -1.4
CCNT1-204ENST00000551989 COL9A1P20849 921 aa6.28□□□□□ -1.4
CCNT1-204ENST00000551989 RBM6P78332 1123 aaKnown RBP6.28□□□□□ -1.4
CCNT1-204ENST00000551989 MAP3K9P80192 1104 aa6.28□□□□□ -1.4
CCNT1-204ENST00000551989 FAM160A1Q05DH4 1040 aa6.28□□□□□ -1.4
CCNT1-204ENST00000551989 FOXD4L6Q3SYB3 417 aaPredicted RBP6.28□□□□□ -1.4
CCNT1-204ENST00000551989 ANO6Q4KMQ2 910 aa6.28□□□□□ -1.4
CCNT1-204ENST00000551989 ZSCAN25Q6NSZ9 544 aa6.28□□□□□ -1.4
CCNT1-204ENST00000551989 FOXD4L3Q6VB84 417 aaPredicted RBP6.28□□□□□ -1.4
CCNT1-204ENST00000551989 Q6ZUG5 572 aa6.28□□□□□ -1.4
CCNT1-204ENST00000551989 ZNF589Q86UQ0 364 aaPredicted RBP6.28□□□□□ -1.4
CCNT1-204ENST00000551989 CREBRFQ8IUR6 639 aa6.28□□□□□ -1.4
CCNT1-204ENST00000551989 NECAB1Q8N987 351 aa6.28□□□□□ -1.4
CCNT1-204ENST00000551989 NSUN7Q8NE18 718 aaKnown RBP6.28□□□□□ -1.4
CCNT1-204ENST00000551989 TRIM5Q9C035 493 aa6.28□□□□□ -1.4
CCNT1-204ENST00000551989 TTC12Q9H892 705 aaPredicted RBP6.28□□□□□ -1.4
CCNT1-204ENST00000551989 PAG1Q9NWQ8 432 aa6.28□□□□□ -1.4
CCNT1-204ENST00000551989 CWC25Q9NXE8 425 aaPredicted RBP6.28□□□□□ -1.4
CCNT1-204ENST00000551989 ZMYM6O95789 1325 aa6.27□□□□□ -1.41
CCNT1-204ENST00000551989 DLEC1Q9Y238 1755 aa6.27□□□□□ -1.41
CCNT1-204ENST00000551989 A0A087WZG4 1122 aa6.27□□□□□ -1.41
CCNT1-204ENST00000551989 GOLGA8CPA6NN73 597 aa6.27□□□□□ -1.41
CCNT1-204ENST00000551989 BECN2A8MW95 431 aa6.27□□□□□ -1.41
CCNT1-204ENST00000551989 EYA2O00167 538 aa6.27□□□□□ -1.41
CCNT1-204ENST00000551989 RNF113AO15541 343 aaKnown RBP6.27□□□□□ -1.41
CCNT1-204ENST00000551989 ONECUT3O60422 494 aaPredicted RBP6.27□□□□□ -1.41
CCNT1-204ENST00000551989 CDKL5O76039 1030 aa6.27□□□□□ -1.41
CCNT1-204ENST00000551989 EXOSC10Q01780 885 aaKnown RBP6.27□□□□□ -1.41
CCNT1-204ENST00000551989 SCRN1Q12765 414 aa6.27□□□□□ -1.41
CCNT1-204ENST00000551989 TFCP2Q12800 502 aa6.27□□□□□ -1.41
CCNT1-204ENST00000551989 AIMP1Q12904 312 aaKnown RBP6.27□□□□□ -1.41
CCNT1-204ENST00000551989 TRIM28Q13263 835 aaKnown RBP6.27□□□□□ -1.41
CCNT1-204ENST00000551989 ZRSR1Q15695 479 aaKnown RBP6.27□□□□□ -1.41
CCNT1-204ENST00000551989 ADALQ6DHV7 355 aa6.27□□□□□ -1.41
CCNT1-204ENST00000551989 UBE3BQ7Z3V4 1068 aa6.27□□□□□ -1.41
CCNT1-204ENST00000551989 DRC7Q8IY82 874 aa6.27□□□□□ -1.41
CCNT1-204ENST00000551989 ELOA2Q8IYF1 753 aaPredicted RBP6.27□□□□□ -1.41
CCNT1-204ENST00000551989 CCDC150Q8NCX0 1101 aa6.27□□□□□ -1.41
CCNT1-204ENST00000551989 ANKRD7Q92527 254 aa6.27□□□□□ -1.41
CCNT1-204ENST00000551989 MRPS27Q92552 414 aaKnown RBP6.27□□□□□ -1.41
CCNT1-204ENST00000551989 ZNF496Q96IT1 587 aaPredicted RBP6.27□□□□□ -1.41
CCNT1-204ENST00000551989 ZNF512BQ96KM6 892 aaPredicted RBP6.27□□□□□ -1.41
CCNT1-204ENST00000551989 TIGD1Q96MW7 591 aa6.27□□□□□ -1.41
CCNT1-204ENST00000551989 MTA3Q9BTC8 594 aa6.27□□□□□ -1.41
CCNT1-204ENST00000551989 PLA2G12BQ9BX93 195 aa6.27□□□□□ -1.41
CCNT1-204ENST00000551989 TEX13AQ9BXU3 409 aaPredicted RBP6.27□□□□□ -1.41
CCNT1-204ENST00000551989 GTPBP4Q9BZE4 634 aaKnown RBP6.27□□□□□ -1.41
CCNT1-204ENST00000551989 SIL1Q9H173 461 aa6.27□□□□□ -1.41
CCNT1-204ENST00000551989 KCNF1Q9H3M0 494 aa6.27□□□□□ -1.41
CCNT1-204ENST00000551989 POLR3EQ9NVU0 708 aa6.27□□□□□ -1.41
CCNT1-204ENST00000551989 TLR7Q9NYK1 1049 aaKnown RBP6.27□□□□□ -1.41
CCNT1-204ENST00000551989 RTEL1Q9NZ71 1219 aa6.27□□□□□ -1.41
CCNT1-204ENST00000551989 CGNQ9P2M7 1197 aaKnown RBP6.27□□□□□ -1.41
CCNT1-204ENST00000551989 CLIP2Q9UDT6 1046 aa6.27□□□□□ -1.41
CCNT1-204ENST00000551989 BCORQ6W2J9 1755 aa6.26□□□□□ -1.41
CCNT1-204ENST00000551989 NHSL1Q5SYE7 1610 aa6.26□□□□□ -1.41
CCNT1-204ENST00000551989 PTPDC1A2A3K4 754 aa6.26□□□□□ -1.41
CCNT1-204ENST00000551989 IFIT1P09914 478 aaKnown RBP6.26□□□□□ -1.41
CCNT1-204ENST00000551989 HSPD1P10809 573 aaKnown RBP6.26□□□□□ -1.41
CCNT1-204ENST00000551989 MYL6BP14649 208 aa6.26□□□□□ -1.41
CCNT1-204ENST00000551989 CABP4P57796 275 aa6.26□□□□□ -1.41
CCNT1-204ENST00000551989 CAMK2BQ13554 666 aa6.26□□□□□ -1.41
CCNT1-204ENST00000551989 IQCB1Q15051 598 aa6.26□□□□□ -1.41
CCNT1-204ENST00000551989 TTF1Q15361 905 aaPredicted RBP6.26□□□□□ -1.41
CCNT1-204ENST00000551989 IMMTQ16891 758 aaKnown RBP6.26□□□□□ -1.41
CCNT1-204ENST00000551989 PROX2Q3B8N5 592 aa6.26□□□□□ -1.41
CCNT1-204ENST00000551989 SLFNL1Q499Z3 407 aa6.26□□□□□ -1.41
CCNT1-204ENST00000551989 CCDC158Q5M9N0 1113 aa6.26□□□□□ -1.41
CCNT1-204ENST00000551989 TMED8Q6PL24 325 aaPredicted RBP6.26□□□□□ -1.41
CCNT1-204ENST00000551989 CPLX2Q6PUV4 134 aaKnown RBP6.26□□□□□ -1.41
CCNT1-204ENST00000551989 CADPS2Q86UW7 1296 aa6.26□□□□□ -1.41
CCNT1-204ENST00000551989 FERMT3Q86UX7 667 aa6.26□□□□□ -1.41
CCNT1-204ENST00000551989 LAPTM4BQ86VI4 370 aa6.26□□□□□ -1.41
CCNT1-204ENST00000551989 CCAR1Q8IX12 1150 aaKnown RBP6.26□□□□□ -1.41
CCNT1-204ENST00000551989 JMYQ8N9B5 988 aa6.26□□□□□ -1.41
CCNT1-204ENST00000551989 CCDC112Q8NEF3 446 aa6.26□□□□□ -1.41
CCNT1-204ENST00000551989 FBXW7Q969H0 707 aa6.26□□□□□ -1.41
CCNT1-204ENST00000551989 PGBD1Q96JS3 809 aa6.26□□□□□ -1.41
CCNT1-204ENST00000551989 DBNDD2Q9BQY9 259 aa6.26□□□□□ -1.41
CCNT1-204ENST00000551989 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.26□□□□□ -1.41
CCNT1-204ENST00000551989 OSBPL5Q9H0X9 879 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms