RNA–Protein interactions for RNA: ENST00000551800.5

CDK4-209, Transcript of cyclin dependent kinase 4, humanhuman

TSL 5

Gene CDK4, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-209ENST00000551800 MRPL50Q8N5N7 158 aaKnown RBP21.42■■□□□ 1.02
CDK4-209ENST00000551800 FAM84BQ96KN1 310 aaPredicted RBP21.42■■□□□ 1.02
CDK4-209ENST00000551800 ELP3Q9H9T3 547 aa21.42■■□□□ 1.02
CDK4-209ENST00000551800 CSADQ9Y600 493 aa21.42■■□□□ 1.02
CDK4-209ENST00000551800 UTYO14607 1347 aa21.41■■□□□ 1.02
CDK4-209ENST00000551800 DZIP1LQ8IYY4 767 aaKnown RBP21.41■■□□□ 1.02
CDK4-209ENST00000551800 TEKT1Q969V4 418 aa21.41■■□□□ 1.02
CDK4-209ENST00000551800 CFHR5Q9BXR6 569 aa21.41■■□□□ 1.02
CDK4-209ENST00000551800 TRIM17Q9Y577 477 aa21.41■■□□□ 1.02
CDK4-209ENST00000551800 WDHD1O75717 1129 aaPredicted RBP21.4■■□□□ 1.02
CDK4-209ENST00000551800 LRRC24Q50LG9 513 aa21.4■■□□□ 1.02
CDK4-209ENST00000551800 ERO1AQ96HE7 468 aa21.4■■□□□ 1.02
CDK4-209ENST00000551800 SMC4Q9NTJ3 1288 aa21.4■■□□□ 1.02
CDK4-209ENST00000551800 PDE8BO95263 885 aa21.39■■□□□ 1.01
CDK4-209ENST00000551800 PUM3Q15397 648 aaKnown RBP21.39■■□□□ 1.01
CDK4-209ENST00000551800 RABL6Q3YEC7 729 aaPredicted RBP21.39■■□□□ 1.01
CDK4-209ENST00000551800 OPTNQ96CV9 577 aa21.39■■□□□ 1.01
CDK4-209ENST00000551800 HOOK2Q96ED9 719 aa21.39■■□□□ 1.01
CDK4-209ENST00000551800 RIPOR2Q9Y4F9 1068 aa21.39■■□□□ 1.01
CDK4-209ENST00000551800 ZNF521Q96K83 1311 aa21.38■■□□□ 1.01
CDK4-209ENST00000551800 USP2O75604 605 aaPredicted RBP21.38■■□□□ 1.01
CDK4-209ENST00000551800 SLC5A1P13866 664 aa21.38■■□□□ 1.01
CDK4-209ENST00000551800 KAZALD1Q96I82 304 aa21.38■■□□□ 1.01
CDK4-209ENST00000551800 AOX1Q06278 1338 aa21.37■■□□□ 1.01
CDK4-209ENST00000551800 IGF2BP3O00425 579 aaKnown RBP eCLIP21.37■■□□□ 1.01
CDK4-209ENST00000551800 ANKRD44Q8N8A2 993 aa21.37■■□□□ 1.01
CDK4-209ENST00000551800 KLHDC4Q8TBB5 520 aa21.37■■□□□ 1.01
CDK4-209ENST00000551800 SSH1Q8WYL5 1049 aa21.37■■□□□ 1.01
CDK4-209ENST00000551800 TMEM39BQ9GZU3 492 aa21.37■■□□□ 1.01
CDK4-209ENST00000551800 UBTFL1P0CB47 393 aaPredicted RBP21.35■■□□□ 1.01
CDK4-209ENST00000551800 HDLBPQ00341 1268 aaKnown RBP21.35■■□□□ 1.01
CDK4-209ENST00000551800 CRHR2Q13324 411 aa21.35■■□□□ 1.01
CDK4-209ENST00000551800 ALDH1L2Q3SY69 923 aa21.35■■□□□ 1.01
CDK4-209ENST00000551800 OTUD5Q96G74 571 aa21.35■■□□□ 1.01
CDK4-209ENST00000551800 R3HDMLQ9H3Y0 253 aa21.35■■□□□ 1.01
CDK4-209ENST00000551800 BCAMP50895 628 aa21.34■■□□□ 1.01
CDK4-209ENST00000551800 ARHGEF6Q15052 776 aa21.34■■□□□ 1.01
CDK4-209ENST00000551800 TAF1CQ15572 869 aaPredicted RBP21.34■■□□□ 1.01
CDK4-209ENST00000551800 FBXO33Q7Z6M2 555 aa21.34■■□□□ 1.01
CDK4-209ENST00000551800 CD99L2Q8TCZ2 262 aa21.34■■□□□ 1.01
CDK4-209ENST00000551800 ZSWIM8A7E2V4 1837 aa21.34■■□□□ 1.01
CDK4-209ENST00000551800 KIF16BQ96L93 1317 aa21.33■■□□□ 1.01
CDK4-209ENST00000551800 MGAMO43451 1857 aa21.33■■□□□ 1.01
CDK4-209ENST00000551800 CCL15-CCL14A0A0B4J2E2 113 aa21.33■■□□□ 1.01
CDK4-209ENST00000551800 GTF2A2P52657 109 aa21.33■■□□□ 1.01
CDK4-209ENST00000551800 CACNB3P54284 484 aa21.33■■□□□ 1.01
CDK4-209ENST00000551800 VGLL4Q14135 290 aa21.33■■□□□ 1.01
CDK4-209ENST00000551800 CCL15Q16663 113 aa21.33■■□□□ 1.01
CDK4-209ENST00000551800 DCAF15Q66K64 600 aa21.33■■□□□ 1.01
CDK4-209ENST00000551800 OTOP1Q7RTM1 612 aa21.33■■□□□ 1.01
CDK4-209ENST00000551800 HDAC5Q9UQL6 1122 aa21.33■■□□□ 1.01
CDK4-209ENST00000551800 MAP3K9P80192 1104 aa21.32■■□□□ 1
CDK4-209ENST00000551800 SP3Q02447 781 aa21.32■■□□□ 1
CDK4-209ENST00000551800 VGLL2Q8N8G2 317 aa21.32■■□□□ 1
CDK4-209ENST00000551800 WDR66Q8TBY9 1149 aa21.32■■□□□ 1
CDK4-209ENST00000551800 WRNIP1Q96S55 665 aa21.32■■□□□ 1
CDK4-209ENST00000551800 SIL1Q9H173 461 aa21.32■■□□□ 1
CDK4-209ENST00000551800 EFCC1Q9HA90 598 aa21.32■■□□□ 1
CDK4-209ENST00000551800 ZFYVE28Q9HCC9 887 aa21.32■■□□□ 1
CDK4-209ENST00000551800 GNL3LQ9NVN8 582 aaKnown RBP21.32■■□□□ 1
CDK4-209ENST00000551800 SUGT1Q9Y2Z0 365 aa21.32■■□□□ 1
CDK4-209ENST00000551800 DOCK1Q14185 1865 aa21.31■■□□□ 1
CDK4-209ENST00000551800 EYA2O00167 538 aa21.31■■□□□ 1
CDK4-209ENST00000551800 SLC34A2O95436 690 aa21.31■■□□□ 1
CDK4-209ENST00000551800 GJA5P36382 358 aa21.31■■□□□ 1
CDK4-209ENST00000551800 SLFN5Q08AF3 891 aa21.31■■□□□ 1
CDK4-209ENST00000551800 LPIN2Q92539 896 aa21.31■■□□□ 1
CDK4-209ENST00000551800 USP44Q9H0E7 712 aa21.31■■□□□ 1
CDK4-209ENST00000551800 ATAD5Q96QE3 1844 aa21.31■■□□□ 1
CDK4-209ENST00000551800 GRIK5Q16478 980 aa21.3■■□□□ 1
CDK4-209ENST00000551800 PRPF38BQ5VTL8 546 aaKnown RBP21.3■■□□□ 1
CDK4-209ENST00000551800 INTS3Q68E01 1043 aaKnown RBP21.3■■□□□ 1
CDK4-209ENST00000551800 CDAN1Q8IWY9 1227 aa21.3■■□□□ 1
CDK4-209ENST00000551800 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.3■■□□□ 11e-7■■■■□ 25.5
CDK4-209ENST00000551800 ZDHHC15Q96MV8 337 aa21.3■■□□□ 1
CDK4-209ENST00000551800 TEPSINQ96N21 525 aa21.3■■□□□ 1
CDK4-209ENST00000551800 RPAP1Q9BWH6 1393 aaPredicted RBP21.3■■□□□ 1
CDK4-209ENST00000551800 CCER2I3L3R5 266 aa21.29■■□□□ 1
CDK4-209ENST00000551800 KIF22Q14807 665 aa21.29■■□□□ 1
CDK4-209ENST00000551800 ATP2B3Q16720 1220 aa21.29■■□□□ 1
CDK4-209ENST00000551800 FAM83AQ86UY5 434 aa21.29■■□□□ 1
CDK4-209ENST00000551800 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.28■■□□□ 1
CDK4-209ENST00000551800 API5Q9BZZ5 524 aaKnown RBP21.28■■□□□ 1
CDK4-209ENST00000551800 CEP126Q9P2H0 1117 aa21.28■■□□□ 1
CDK4-209ENST00000551800 PTPRFP10586 1907 aa21.27■■□□□ 1
CDK4-209ENST00000551800 CETPP11597 493 aa21.27■■□□□ 1
CDK4-209ENST00000551800 HHIPL2Q6UWX4 724 aa21.27■■□□□ 1
CDK4-209ENST00000551800 CNKSR2Q8WXI2 1034 aa21.27■■□□□ 1
CDK4-209ENST00000551800 ZNF341Q9BYN7 854 aa21.27■■□□□ 1
CDK4-209ENST00000551800 PTPN22Q9Y2R2 807 aa21.27■■□□□ 1
CDK4-209ENST00000551800 TESPA1A2RU30 521 aaPredicted RBP21.26■□□□□ 0.99
CDK4-209ENST00000551800 LDHBP07195 334 aaKnown RBP21.26■□□□□ 0.99
CDK4-209ENST00000551800 CT47B1P0C2W7 299 aaPredicted RBP21.26■□□□□ 0.99
CDK4-209ENST00000551800 ERO1BQ86YB8 467 aa21.26■□□□□ 0.99
CDK4-209ENST00000551800 FBXO3Q9UK99 471 aa21.26■□□□□ 0.99
CDK4-209ENST00000551800 SPDYE5A6NIY4 337 aa21.25■□□□□ 0.99
CDK4-209ENST00000551800 FGFR2P21802 821 aa21.25■□□□□ 0.99
CDK4-209ENST00000551800 SNAPC2Q13487 334 aa21.25■□□□□ 0.99
CDK4-209ENST00000551800 FKBP1CQ5VVH2 108 aa21.25■□□□□ 0.99
CDK4-209ENST00000551800 BRI3BPQ8WY22 251 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms