RNA–Protein interactions for RNA: ENST00000551485.5

PFKM-223, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-223	ENST00000551485	ZNF594	Q96JF6	807 aa	Predicted RBP	13.51	□□□□□ -0.25
PFKM-223	ENST00000551485	ZFYVE28	Q9HCC9	887 aa		13.51	□□□□□ -0.25
PFKM-223	ENST00000551485	CNNM1	Q9NRU3	951 aa		13.51	□□□□□ -0.25
PFKM-223	ENST00000551485	TTF2	Q9UNY4	1162 aa	Known RBP	13.51	□□□□□ -0.25
PFKM-223	ENST00000551485	PTCH2	Q9Y6C5	1203 aa		13.51	□□□□□ -0.25
PFKM-223	ENST00000551485	TRIOBP	Q9H2D6	2365 aa		13.51	□□□□□ -0.25
PFKM-223	ENST00000551485	FANCI	Q9NVI1	1328 aa		13.5	□□□□□ -0.25
PFKM-223	ENST00000551485	GTF2A2	P52657	109 aa		13.5	□□□□□ -0.25
PFKM-223	ENST00000551485	BEND3	Q5T5X7	828 aa		13.5	□□□□□ -0.25
PFKM-223	ENST00000551485	NBPF11	Q86T75	865 aa		13.5	□□□□□ -0.25
PFKM-223	ENST00000551485	DZIP1L	Q8IYY4	767 aa	Known RBP	13.5	□□□□□ -0.25
PFKM-223	ENST00000551485	FAM43A	Q8N2R8	423 aa		13.5	□□□□□ -0.25
PFKM-223	ENST00000551485	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
PFKM-223	ENST00000551485	TCP10L2	B9ZVM9	353 aa		13.49	□□□□□ -0.25
PFKM-223	ENST00000551485		F6X3S4	739 aa		13.49	□□□□□ -0.25
PFKM-223	ENST00000551485	CRK	P46108	304 aa		13.49	□□□□□ -0.25
PFKM-223	ENST00000551485	GYG1	P46976	350 aa		13.49	□□□□□ -0.25
PFKM-223	ENST00000551485	MAP3K9	P80192	1104 aa		13.49	□□□□□ -0.25
PFKM-223	ENST00000551485	UBE4A	Q14139	1066 aa		13.49	□□□□□ -0.25
PFKM-223	ENST00000551485	SLC4A8	Q2Y0W8	1093 aa		13.49	□□□□□ -0.25
PFKM-223	ENST00000551485	OTUD5	Q96G74	571 aa		13.49	□□□□□ -0.25
PFKM-223	ENST00000551485	TMEM39B	Q9GZU3	492 aa		13.49	□□□□□ -0.25
PFKM-223	ENST00000551485	CSAD	Q9Y600	493 aa		13.49	□□□□□ -0.25
PFKM-223	ENST00000551485	GRM8	O00222	908 aa		13.48	□□□□□ -0.25
PFKM-223	ENST00000551485	VAMP4	O75379	141 aa		13.48	□□□□□ -0.25
PFKM-223	ENST00000551485	HIBADH	P31937	336 aa	Known RBP	13.48	□□□□□ -0.25
PFKM-223	ENST00000551485	TNNI2	P48788	182 aa		13.48	□□□□□ -0.25
PFKM-223	ENST00000551485	COLQ	Q9Y215	455 aa	Predicted RBP	13.48	□□□□□ -0.25
PFKM-223	ENST00000551485	SPDYE5	A6NIY4	337 aa		13.47	□□□□□ -0.25
PFKM-223	ENST00000551485	FAM84B	Q96KN1	310 aa	Predicted RBP	13.47	□□□□□ -0.25
PFKM-223	ENST00000551485	ZSWIM8	A7E2V4	1837 aa		13.47	□□□□□ -0.25
PFKM-223	ENST00000551485	TLR2	O60603	784 aa		13.46	□□□□□ -0.25
PFKM-223	ENST00000551485	WDHD1	O75717	1129 aa	Predicted RBP	13.46	□□□□□ -0.25
PFKM-223	ENST00000551485	MYC	P01106	439 aa	Predicted RBP	13.46	□□□□□ -0.25
PFKM-223	ENST00000551485	CETP	P11597	493 aa		13.46	□□□□□ -0.25
PFKM-223	ENST00000551485	CCDC184	Q52MB2	194 aa		13.46	□□□□□ -0.25
PFKM-223	ENST00000551485	NCBP3	Q53F19	620 aa	Known RBP	13.46	□□□□□ -0.25
PFKM-223	ENST00000551485	SH3TC2	Q8TF17	1288 aa		13.46	□□□□□ -0.25
PFKM-223	ENST00000551485	ARHGAP39	Q9C0H5	1083 aa		13.46	□□□□□ -0.25
PFKM-223	ENST00000551485	ZCCHC17	Q9NP64	241 aa	Known RBP	13.46	□□□□□ -0.25
PFKM-223	ENST00000551485	SNCAIP	Q9Y6H5	919 aa		13.46	□□□□□ -0.25
PFKM-223	ENST00000551485	BTBD19	C9JJ37	291 aa		13.45	□□□□□ -0.26
PFKM-223	ENST00000551485	LACTB	P83111	547 aa	Predicted RBP	13.45	□□□□□ -0.26
PFKM-223	ENST00000551485	HDLBP	Q00341	1268 aa	Known RBP	13.45	□□□□□ -0.26
PFKM-223	ENST00000551485	EXOSC9	Q06265	439 aa	Known RBP	13.45	□□□□□ -0.26
PFKM-223	ENST00000551485	KIF22	Q14807	665 aa		13.45	□□□□□ -0.26
PFKM-223	ENST00000551485	GRIK5	Q16478	980 aa		13.45	□□□□□ -0.26
PFKM-223	ENST00000551485	ERO1B	Q86YB8	467 aa		13.45	□□□□□ -0.26
PFKM-223	ENST00000551485	PUS3	Q9BZE2	481 aa	Known RBP	13.45	□□□□□ -0.26
PFKM-223	ENST00000551485	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.45	□□□□□ -0.26
PFKM-223	ENST00000551485	SZT2	Q5T011	3432 aa		13.44	□□□□□ -0.26
PFKM-223	ENST00000551485		H0YGN5	161 aa		13.44	□□□□□ -0.26
PFKM-223	ENST00000551485	GNRH1	P01148	92 aa		13.44	□□□□□ -0.26
PFKM-223	ENST00000551485	CACNB3	P54284	484 aa		13.44	□□□□□ -0.26
PFKM-223	ENST00000551485	CHAF1A	Q13111	956 aa	Predicted RBP	13.44	□□□□□ -0.26
PFKM-223	ENST00000551485	SNAPC2	Q13487	334 aa		13.44	□□□□□ -0.26
PFKM-223	ENST00000551485	FBXO33	Q7Z6M2	555 aa		13.44	□□□□□ -0.26
PFKM-223	ENST00000551485	VPS37D	Q86XT2	251 aa		13.44	□□□□□ -0.26
PFKM-223	ENST00000551485	TBC1D22A	Q8WUA7	517 aa		13.44	□□□□□ -0.26
PFKM-223	ENST00000551485	WRNIP1	Q96S55	665 aa		13.44	□□□□□ -0.26
PFKM-223	ENST00000551485	RANBP2	P49792	3224 aa	Known RBP	13.44	□□□□□ -0.26
PFKM-223	ENST00000551485	MROH5	Q6ZUA9	1318 aa		13.43	□□□□□ -0.26
PFKM-223	ENST00000551485	IRF6	O14896	467 aa		13.43	□□□□□ -0.26
PFKM-223	ENST00000551485	ALDH1L1	O75891	902 aa		13.43	□□□□□ -0.26
PFKM-223	ENST00000551485	PRMT2	P55345	433 aa		13.43	□□□□□ -0.26
PFKM-223	ENST00000551485	PPIL2	Q13356	520 aa		13.43	□□□□□ -0.26
PFKM-223	ENST00000551485	FAM83A	Q86UY5	434 aa		13.43	□□□□□ -0.26
PFKM-223	ENST00000551485	WDR63	Q8IWG1	891 aa		13.43	□□□□□ -0.26
PFKM-223	ENST00000551485	TEKT1	Q969V4	418 aa		13.43	□□□□□ -0.26
PFKM-223	ENST00000551485	SUCLG2	Q96I99	432 aa		13.43	□□□□□ -0.26
PFKM-223	ENST00000551485	TMOD2	Q9NZR1	351 aa		13.43	□□□□□ -0.26
PFKM-223	ENST00000551485	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.43	□□□□□ -0.26
PFKM-223	ENST00000551485	RIPOR2	Q9Y4F9	1068 aa		13.43	□□□□□ -0.26
PFKM-223	ENST00000551485	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.42	□□□□□ -0.26
PFKM-223	ENST00000551485	HOOK2	Q96ED9	719 aa		13.42	□□□□□ -0.26
PFKM-223	ENST00000551485	KAZALD1	Q96I82	304 aa		13.42	□□□□□ -0.26
PFKM-223	ENST00000551485	ZDHHC15	Q96MV8	337 aa		13.42	□□□□□ -0.26
PFKM-223	ENST00000551485	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.42	□□□□□ -0.26
PFKM-223	ENST00000551485	FRAT2	O75474	233 aa	Predicted RBP	13.41	□□□□□ -0.26
PFKM-223	ENST00000551485	CAVIN4	Q5BKX8	364 aa		13.41	□□□□□ -0.26
PFKM-223	ENST00000551485	FKBP1C	Q5VVH2	108 aa		13.41	□□□□□ -0.26
PFKM-223	ENST00000551485	DCAF15	Q66K64	600 aa		13.41	□□□□□ -0.26
PFKM-223	ENST00000551485	SLC4A10	Q6U841	1118 aa		13.41	□□□□□ -0.26
PFKM-223	ENST00000551485	C17orf99	Q6UX52	265 aa		13.41	□□□□□ -0.26
PFKM-223	ENST00000551485	SHISA4	Q96DD7	197 aa		13.41	□□□□□ -0.26
PFKM-223	ENST00000551485	MRI	Q9BWK5	157 aa		13.41	□□□□□ -0.26
PFKM-223	ENST00000551485	SRCIN1	Q9C0H9	1055 aa		13.41	□□□□□ -0.26
PFKM-223	ENST00000551485	MAST3	O60307	1309 aa		13.4	□□□□□ -0.26
PFKM-223	ENST00000551485	CTGF	P29279	349 aa		13.4	□□□□□ -0.26
PFKM-223	ENST00000551485	PPAT	Q06203	517 aa		13.4	□□□□□ -0.26
PFKM-223	ENST00000551485	MTFR1	Q15390	333 aa		13.4	□□□□□ -0.26
PFKM-223	ENST00000551485	LRRC24	Q50LG9	513 aa		13.4	□□□□□ -0.26
PFKM-223	ENST00000551485	METTL24	Q5JXM2	366 aa		13.4	□□□□□ -0.26
PFKM-223	ENST00000551485	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.4	□□□□□ -0.26
PFKM-223	ENST00000551485	CHRDL2	Q6WN34	429 aa		13.4	□□□□□ -0.26
PFKM-223	ENST00000551485	ZNF341	Q9BYN7	854 aa		13.4	□□□□□ -0.26
PFKM-223	ENST00000551485	SRRD	Q9UH36	339 aa		13.4	□□□□□ -0.26
PFKM-223	ENST00000551485	CPA4	Q9UI42	421 aa		13.4	□□□□□ -0.26
PFKM-223	ENST00000551485	SUGT1	Q9Y2Z0	365 aa		13.4	□□□□□ -0.26
PFKM-223	ENST00000551485	SALL2	Q9Y467	1007 aa	Predicted RBP	13.4	□□□□□ -0.26

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