RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 CAP1Q01518 475 aa22.57■■□□□ 1.2
PRPF40B-215ENST00000551418 CHAF1AQ13111 956 aaPredicted RBP22.57■■□□□ 1.2
PRPF40B-215ENST00000551418 TMEM39BQ9GZU3 492 aa22.57■■□□□ 1.2
PRPF40B-215ENST00000551418 ARAP2Q8WZ64 1704 aa22.57■■□□□ 1.2
PRPF40B-215ENST00000551418 MROH5Q6ZUA9 1318 aa22.57■■□□□ 1.2
PRPF40B-215ENST00000551418 ALDH1A1P00352 501 aa22.56■■□□□ 1.2
PRPF40B-215ENST00000551418 VGLL2Q8N8G2 317 aa22.56■■□□□ 1.2
PRPF40B-215ENST00000551418 ELP3Q9H9T3 547 aa22.56■■□□□ 1.2
PRPF40B-215ENST00000551418 BCAMP50895 628 aa22.55■■□□□ 1.2
PRPF40B-215ENST00000551418 CACNB3P54284 484 aa22.55■■□□□ 1.2
PRPF40B-215ENST00000551418 METTL24Q5JXM2 366 aa22.55■■□□□ 1.2
PRPF40B-215ENST00000551418 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.55■■□□□ 1.2
PRPF40B-215ENST00000551418 ANKRD13AQ8IZ07 590 aa22.55■■□□□ 1.2
PRPF40B-215ENST00000551418 SSH1Q8WYL5 1049 aa22.55■■□□□ 1.2
PRPF40B-215ENST00000551418 USP44Q9H0E7 712 aa22.55■■□□□ 1.2
PRPF40B-215ENST00000551418 CRHR2Q13324 411 aa22.54■■□□□ 1.2
PRPF40B-215ENST00000551418 OTOP1Q7RTM1 612 aa22.54■■□□□ 1.2
PRPF40B-215ENST00000551418 OPTNQ96CV9 577 aa22.54■■□□□ 1.2
PRPF40B-215ENST00000551418 TRIM17Q9Y577 477 aa22.54■■□□□ 1.2
PRPF40B-215ENST00000551418 UNCXA6NJT0 531 aa22.53■■□□□ 1.2
PRPF40B-215ENST00000551418 PDE8BO95263 885 aa22.53■■□□□ 1.2
PRPF40B-215ENST00000551418 TESPA1A2RU30 521 aaPredicted RBP22.52■■□□□ 1.2
PRPF40B-215ENST00000551418 TNFAIP1Q13829 316 aa22.52■■□□□ 1.2
PRPF40B-215ENST00000551418 VPS37DQ86XT2 251 aa22.52■■□□□ 1.2
PRPF40B-215ENST00000551418 CD99L2Q8TCZ2 262 aa22.52■■□□□ 1.2
PRPF40B-215ENST00000551418 MS4A4AQ96JQ5 239 aa22.52■■□□□ 1.2
PRPF40B-215ENST00000551418 HTTP42858 3142 aa22.5■■□□□ 1.19
PRPF40B-215ENST00000551418 RFX5P48382 616 aaPredicted RBP22.5■■□□□ 1.19
PRPF40B-215ENST00000551418 VGLL4Q14135 290 aa22.5■■□□□ 1.19
PRPF40B-215ENST00000551418 BRI3BPQ8WY22 251 aa22.5■■□□□ 1.19
PRPF40B-215ENST00000551418 CDCA7LQ96GN5 454 aa22.5■■□□□ 1.19
PRPF40B-215ENST00000551418 FRAT2O75474 233 aaPredicted RBP22.49■■□□□ 1.19
PRPF40B-215ENST00000551418 FGFR2P21802 821 aa22.49■■□□□ 1.19
PRPF40B-215ENST00000551418 MAP3K9P80192 1104 aa22.49■■□□□ 1.19
PRPF40B-215ENST00000551418 CAVIN4Q5BKX8 364 aa22.49■■□□□ 1.19
PRPF40B-215ENST00000551418 POTEFA5A3E0 1075 aa22.48■■□□□ 1.19
PRPF40B-215ENST00000551418 SLFN5Q08AF3 891 aa22.48■■□□□ 1.19
PRPF40B-215ENST00000551418 APOBEC3HQ6NTF7 200 aaKnown RBP22.48■■□□□ 1.19
PRPF40B-215ENST00000551418 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.48■■□□□ 1.19
PRPF40B-215ENST00000551418 PTPRCP08575 1304 aa22.48■■□□□ 1.19
PRPF40B-215ENST00000551418 HDLBPQ00341 1268 aaKnown RBP22.47■■□□□ 1.19
PRPF40B-215ENST00000551418 TEKT1Q969V4 418 aa22.47■■□□□ 1.19
PRPF40B-215ENST00000551418 PTPN22Q9Y2R2 807 aa22.47■■□□□ 1.19
PRPF40B-215ENST00000551418 E9PSI1 815 aa22.46■■□□□ 1.19
PRPF40B-215ENST00000551418 TNNI2P48788 182 aa22.46■■□□□ 1.19
PRPF40B-215ENST00000551418 OTUD7BQ6GQQ9 843 aa22.46■■□□□ 1.19
PRPF40B-215ENST00000551418 FAM43AQ8N2R8 423 aa22.46■■□□□ 1.19
PRPF40B-215ENST00000551418 TBC1D22AQ8WUA7 517 aa22.46■■□□□ 1.19
PRPF40B-215ENST00000551418 OTUD5Q96G74 571 aa22.46■■□□□ 1.19
PRPF40B-215ENST00000551418 ERO1AQ96HE7 468 aa22.46■■□□□ 1.19
PRPF40B-215ENST00000551418 ZDHHC15Q96MV8 337 aa22.46■■□□□ 1.19
PRPF40B-215ENST00000551418 CCL15-CCL14A0A0B4J2E2 113 aa22.45■■□□□ 1.18
PRPF40B-215ENST00000551418 SP3Q02447 781 aa22.45■■□□□ 1.18
PRPF40B-215ENST00000551418 CCL15Q16663 113 aa22.45■■□□□ 1.18
PRPF40B-215ENST00000551418 PRPF38BQ5VTL8 546 aaKnown RBP22.45■■□□□ 1.18
PRPF40B-215ENST00000551418 ATG9AQ7Z3C6 839 aa22.45■■□□□ 1.18
PRPF40B-215ENST00000551418 ZKSCAN4Q969J2 545 aaPredicted RBP22.45■■□□□ 1.18
PRPF40B-215ENST00000551418 SNCAIPQ9Y6H5 919 aa22.45■■□□□ 1.18
PRPF40B-215ENST00000551418 EYA2O00167 538 aa22.44■■□□□ 1.18
PRPF40B-215ENST00000551418 PUM3Q15397 648 aaKnown RBP22.44■■□□□ 1.18
PRPF40B-215ENST00000551418 EFCC1Q9HA90 598 aa22.44■■□□□ 1.18
PRPF40B-215ENST00000551418 KIAA0100Q14667 2235 aaKnown RBP22.43■■□□□ 1.18
PRPF40B-215ENST00000551418 IFIT1P09914 478 aaKnown RBP22.43■■□□□ 1.18
PRPF40B-215ENST00000551418 MRIQ9BWK5 157 aa22.43■■□□□ 1.18
PRPF40B-215ENST00000551418 ZSWIM8A7E2V4 1837 aa22.43■■□□□ 1.18
PRPF40B-215ENST00000551418 CENPFP49454 3210 aa22.42■■□□□ 1.18
PRPF40B-215ENST00000551418 MYH13Q9UKX3 1938 aa22.42■■□□□ 1.18
PRPF40B-215ENST00000551418 GTF2A2P52657 109 aa22.42■■□□□ 1.18
PRPF40B-215ENST00000551418 TAF1CQ15572 869 aaPredicted RBP22.42■■□□□ 1.18
PRPF40B-215ENST00000551418 CSADQ9Y600 493 aa22.42■■□□□ 1.18
PRPF40B-215ENST00000551418 SPDYE5A6NIY4 337 aa22.41■■□□□ 1.18
PRPF40B-215ENST00000551418 MIGA2Q7L4E1 593 aa22.41■■□□□ 1.18
PRPF40B-215ENST00000551418 WRNIP1Q96S55 665 aa22.41■■□□□ 1.18
PRPF40B-215ENST00000551418 SIL1Q9H173 461 aa22.41■■□□□ 1.18
PRPF40B-215ENST00000551418 KIF16BQ96L93 1317 aa22.4■■□□□ 1.18
PRPF40B-215ENST00000551418 DIXDC1Q155Q3 683 aa22.4■■□□□ 1.18
PRPF40B-215ENST00000551418 HHIPL2Q6UWX4 724 aa22.4■■□□□ 1.18
PRPF40B-215ENST00000551418 FAM83AQ86UY5 434 aa22.4■■□□□ 1.18
PRPF40B-215ENST00000551418 SMC4Q9NTJ3 1288 aa22.4■■□□□ 1.18
PRPF40B-215ENST00000551418 IRF6O14896 467 aa22.39■■□□□ 1.17
PRPF40B-215ENST00000551418 SLC5A1P13866 664 aa22.39■■□□□ 1.17
PRPF40B-215ENST00000551418 EN2P19622 333 aaPredicted RBP22.39■■□□□ 1.17
PRPF40B-215ENST00000551418 INPP5BP32019 993 aa22.39■■□□□ 1.17
PRPF40B-215ENST00000551418 ALDH1L2Q3SY69 923 aa22.39■■□□□ 1.17
PRPF40B-215ENST00000551418 TRMT2AQ8IZ69 625 aaKnown RBP22.39■■□□□ 1.17
PRPF40B-215ENST00000551418 LPIN2Q92539 896 aa22.39■■□□□ 1.17
PRPF40B-215ENST00000551418 ZFYVE28Q9HCC9 887 aa22.39■■□□□ 1.17
PRPF40B-215ENST00000551418 SUGT1Q9Y2Z0 365 aa22.39■■□□□ 1.17
PRPF40B-215ENST00000551418 BTBD19C9JJ37 291 aa22.38■■□□□ 1.17
PRPF40B-215ENST00000551418 PRDX5P30044 214 aa22.38■■□□□ 1.17
PRPF40B-215ENST00000551418 TCP10Q12799 353 aa22.38■■□□□ 1.17
PRPF40B-215ENST00000551418 FKBP1CQ5VVH2 108 aa22.38■■□□□ 1.17
PRPF40B-215ENST00000551418 ERO1BQ86YB8 467 aa22.38■■□□□ 1.17
PRPF40B-215ENST00000551418 ARMC5Q96C12 935 aa22.38■■□□□ 1.17
PRPF40B-215ENST00000551418 ARHGAP39Q9C0H5 1083 aa22.38■■□□□ 1.17
PRPF40B-215ENST00000551418 TMOD2Q9NZR1 351 aa22.38■■□□□ 1.17
PRPF40B-215ENST00000551418 NOB1Q9ULX3 412 aaKnown RBP22.38■■□□□ 1.17
PRPF40B-215ENST00000551418 PA2G4Q9UQ80 394 aaKnown RBP22.38■■□□□ 1.17
PRPF40B-215ENST00000551418 DAGLAQ9Y4D2 1042 aa22.38■■□□□ 1.17
PRPF40B-215ENST00000551418 MKI67P46013 3256 aaKnown RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms