RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 NFKBIEO00221 500 aa12.48□□□□□ -0.41
NEK3-203ENST00000551355 SEC24BO95487 1268 aa12.48□□□□□ -0.41
NEK3-203ENST00000551355 CYP7A1P22680 504 aa12.48□□□□□ -0.41
NEK3-203ENST00000551355 MECOMQ03112 1051 aa12.48□□□□□ -0.41
NEK3-203ENST00000551355 OSBP2Q969R2 916 aa12.48□□□□□ -0.41
NEK3-203ENST00000551355 AIDAQ96BJ3 306 aa12.48□□□□□ -0.41
NEK3-203ENST00000551355 FAM163AQ96GL9 167 aaPredicted RBP12.48□□□□□ -0.41
NEK3-203ENST00000551355 NOL10Q9BSC4 688 aaKnown RBP12.48□□□□□ -0.41
NEK3-203ENST00000551355 USP26Q9BXU7 913 aa12.48□□□□□ -0.41
NEK3-203ENST00000551355 C22orf23Q9BZE7 217 aa12.48□□□□□ -0.41
NEK3-203ENST00000551355 AKAP11Q9UKA4 1901 aa12.47□□□□□ -0.41
NEK3-203ENST00000551355 BAG3O95817 575 aa12.47□□□□□ -0.41
NEK3-203ENST00000551355 PRDX5P30044 214 aa12.47□□□□□ -0.41
NEK3-203ENST00000551355 RBM25P49756 843 aaKnown RBP12.47□□□□□ -0.41
NEK3-203ENST00000551355 HDLBPQ00341 1268 aaKnown RBP12.47□□□□□ -0.41
NEK3-203ENST00000551355 TNIP1Q15025 636 aa12.47□□□□□ -0.41
NEK3-203ENST00000551355 DACT2Q5SW24 774 aa12.47□□□□□ -0.41
NEK3-203ENST00000551355 ARHGAP27Q6ZUM4 889 aa12.47□□□□□ -0.41
NEK3-203ENST00000551355 FBXW7Q969H0 707 aa12.47□□□□□ -0.41
NEK3-203ENST00000551355 DSCC1Q9BVC3 393 aa12.47□□□□□ -0.41
NEK3-203ENST00000551355 BRCA1P38398 1863 aaKnown RBP12.46□□□□□ -0.41
NEK3-203ENST00000551355 MAGEB6P1A0A0J9YX57 407 aa12.46□□□□□ -0.41
NEK3-203ENST00000551355 GPAA1O43292 621 aa12.46□□□□□ -0.41
NEK3-203ENST00000551355 GRIN3BO60391 1043 aa12.46□□□□□ -0.41
NEK3-203ENST00000551355 VIL1P09327 827 aaKnown RBP12.46□□□□□ -0.41
NEK3-203ENST00000551355 PLCG2P16885 1265 aa12.46□□□□□ -0.41
NEK3-203ENST00000551355 LMNB1P20700 586 aa12.46□□□□□ -0.41
NEK3-203ENST00000551355 RNF20Q5VTR2 975 aa12.46□□□□□ -0.41
NEK3-203ENST00000551355 MAP4K1Q92918 833 aa12.46□□□□□ -0.41
NEK3-203ENST00000551355 TBC1D32Q96NH3 1257 aa12.46□□□□□ -0.41
NEK3-203ENST00000551355 LSG1Q9H089 658 aaKnown RBP12.46□□□□□ -0.41
NEK3-203ENST00000551355 PUS7LQ9H0K6 701 aaKnown RBP12.46□□□□□ -0.41
NEK3-203ENST00000551355 CTNNA3Q9UI47 895 aa12.46□□□□□ -0.41
NEK3-203ENST00000551355 U3KPZ7 1027 aaPredicted RBP12.46□□□□□ -0.41
NEK3-203ENST00000551355 M0R2C6 588 aa12.45□□□□□ -0.42
NEK3-203ENST00000551355 EIF6P56537 245 aaKnown RBP12.45□□□□□ -0.42
NEK3-203ENST00000551355 ANAPC15P60006 121 aa12.45□□□□□ -0.42
NEK3-203ENST00000551355 PPP4CP60510 307 aa12.45□□□□□ -0.42
NEK3-203ENST00000551355 RSBN1LQ6PCB5 846 aaPredicted RBP12.45□□□□□ -0.42
NEK3-203ENST00000551355 HHIPL2Q6UWX4 724 aa12.45□□□□□ -0.42
NEK3-203ENST00000551355 ZNF589Q86UQ0 364 aaPredicted RBP12.45□□□□□ -0.42
NEK3-203ENST00000551355 AGBL3Q8NEM8 1001 aa12.45□□□□□ -0.42
NEK3-203ENST00000551355 STRBPQ96SI9 672 aaKnown RBP12.45□□□□□ -0.42
NEK3-203ENST00000551355 SEC62Q99442 399 aaKnown RBP12.45□□□□□ -0.42
NEK3-203ENST00000551355 NACAP1Q9BZK3 213 aa12.45□□□□□ -0.42
NEK3-203ENST00000551355 TSHZ2Q9NRE2 1034 aa12.45□□□□□ -0.42
NEK3-203ENST00000551355 JAG2Q9Y219 1238 aa12.45□□□□□ -0.42
NEK3-203ENST00000551355 CACNA1SQ13698 1873 aa12.44□□□□□ -0.42
NEK3-203ENST00000551355 MROH7-TTC4A0A0A0MT08 1334 aa12.44□□□□□ -0.42
NEK3-203ENST00000551355 YDJCA8MPS7 323 aa12.44□□□□□ -0.42
NEK3-203ENST00000551355 PATL2C9JE40 543 aaKnown RBP12.44□□□□□ -0.42
NEK3-203ENST00000551355 MBD4O95243 580 aa12.44□□□□□ -0.42
NEK3-203ENST00000551355 HSPD1P10809 573 aaKnown RBP12.44□□□□□ -0.42
NEK3-203ENST00000551355 ZKSCAN1P17029 563 aaPredicted RBP12.44□□□□□ -0.42
NEK3-203ENST00000551355 RPS12P25398 132 aaKnown RBP12.44□□□□□ -0.42
NEK3-203ENST00000551355 CIAPIN1Q6FI81 312 aa12.44□□□□□ -0.42
NEK3-203ENST00000551355 GIMAP6Q6P9H5 292 aa12.44□□□□□ -0.42
NEK3-203ENST00000551355 TEKT1Q969V4 418 aa12.44□□□□□ -0.42
NEK3-203ENST00000551355 DDRGK1Q96HY6 314 aa12.44□□□□□ -0.42
NEK3-203ENST00000551355 IL25Q9H293 177 aa12.44□□□□□ -0.42
NEK3-203ENST00000551355 SERPINA10Q9UK55 444 aa12.44□□□□□ -0.42
NEK3-203ENST00000551355 HDAC9Q9UKV0 1011 aa12.44□□□□□ -0.42
NEK3-203ENST00000551355 TTF2Q9UNY4 1162 aaKnown RBP12.44□□□□□ -0.42
NEK3-203ENST00000551355 GAKO14976 1311 aa12.43□□□□□ -0.42
NEK3-203ENST00000551355 ZMYM6O95789 1325 aa12.43□□□□□ -0.42
NEK3-203ENST00000551355 GPR75-ASB3A0A0A6YYF3 556 aa12.43□□□□□ -0.42
NEK3-203ENST00000551355 FZD9O00144 591 aa12.43□□□□□ -0.42
NEK3-203ENST00000551355 HSPA4P34932 840 aa12.43□□□□□ -0.42
NEK3-203ENST00000551355 ALX1Q15699 326 aa12.43□□□□□ -0.42
NEK3-203ENST00000551355 GPR162Q16538 588 aa12.43□□□□□ -0.42
NEK3-203ENST00000551355 OGFOD1Q8N543 542 aa12.43□□□□□ -0.42
NEK3-203ENST00000551355 CERS5Q8N5B7 392 aa12.43□□□□□ -0.42
NEK3-203ENST00000551355 ZNF384Q8TF68 577 aa12.43□□□□□ -0.42
NEK3-203ENST00000551355 RIOK1Q9BRS2 568 aaKnown RBP12.43□□□□□ -0.42
NEK3-203ENST00000551355 CRNKL1Q9BZJ0 848 aaKnown RBP12.43□□□□□ -0.42
NEK3-203ENST00000551355 ARFGEF1Q9Y6D6 1849 aa12.43□□□□□ -0.42
NEK3-203ENST00000551355 AK9Q5TCS8 1911 aa12.43□□□□□ -0.42
NEK3-203ENST00000551355 DOCK2Q92608 1830 aa12.42□□□□□ -0.42
NEK3-203ENST00000551355 PSMD14O00487 310 aa12.42□□□□□ -0.42
NEK3-203ENST00000551355 RAD17O75943 681 aa12.42□□□□□ -0.42
NEK3-203ENST00000551355 CHGBP05060 677 aa12.42□□□□□ -0.42
NEK3-203ENST00000551355 APPP05067 770 aa12.42□□□□□ -0.42
NEK3-203ENST00000551355 RASSF7Q02833 373 aa12.42□□□□□ -0.42
NEK3-203ENST00000551355 PTH1RQ03431 593 aa12.42□□□□□ -0.42
NEK3-203ENST00000551355 CXCL9Q07325 125 aa12.42□□□□□ -0.42
NEK3-203ENST00000551355 KRT32Q14532 448 aa12.42□□□□□ -0.42
NEK3-203ENST00000551355 NECTIN1Q15223 517 aa12.42□□□□□ -0.42
NEK3-203ENST00000551355 SLFNL1Q499Z3 407 aa12.42□□□□□ -0.42
NEK3-203ENST00000551355 CCDC129Q6ZRS4 1044 aa12.42□□□□□ -0.42
NEK3-203ENST00000551355 MIGA1Q8NAN2 632 aa12.42□□□□□ -0.42
NEK3-203ENST00000551355 IL17RAQ96F46 866 aa12.42□□□□□ -0.42
NEK3-203ENST00000551355 ZDHHC15Q96MV8 337 aa12.42□□□□□ -0.42
NEK3-203ENST00000551355 KCNQ5Q9NR82 932 aa12.42□□□□□ -0.42
NEK3-203ENST00000551355 ATP8A2Q9NTI2 1148 aa12.42□□□□□ -0.42
NEK3-203ENST00000551355 RBM8AQ9Y5S9 174 aaKnown RBP12.42□□□□□ -0.42
NEK3-203ENST00000551355 FER1L6Q2WGJ9 1857 aa12.42□□□□□ -0.42
NEK3-203ENST00000551355 YBX3P16989 372 aaKnown RBP eCLIP12.41□□□□□ -0.42
NEK3-203ENST00000551355 DIXDC1Q155Q3 683 aa12.41□□□□□ -0.42
NEK3-203ENST00000551355 GRIK5Q16478 980 aa12.41□□□□□ -0.42
NEK3-203ENST00000551355 IMMTQ16891 758 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms