RNA–Protein interactions for RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-206ENST00000550851 OSBPL3Q9H4L5 887 aa13.38□□□□□ -0.27
LGR5-206ENST00000550851 TPCN1Q9ULQ1 816 aa13.38□□□□□ -0.27
LGR5-206ENST00000550851 USP17L12C9JPN9 530 aa13.37□□□□□ -0.27
LGR5-206ENST00000550851 USP17L21D6R901 530 aa13.37□□□□□ -0.27
LGR5-206ENST00000550851 CCP110O43303 1012 aa13.37□□□□□ -0.27
LGR5-206ENST00000550851 PRKCSHP14314 528 aaPredicted RBP13.37□□□□□ -0.27
LGR5-206ENST00000550851 MCM7P33993 719 aa13.37□□□□□ -0.27
LGR5-206ENST00000550851 GNAQP50148 359 aa13.37□□□□□ -0.27
LGR5-206ENST00000550851 SYCP1Q15431 976 aa13.37□□□□□ -0.27
LGR5-206ENST00000550851 PTPN14Q15678 1187 aa13.37□□□□□ -0.27
LGR5-206ENST00000550851 HLFQ16534 295 aa13.37□□□□□ -0.27
LGR5-206ENST00000550851 RBM17Q96I25 401 aaKnown RBP13.37□□□□□ -0.27
LGR5-206ENST00000550851 CPSF1Q10570 1443 aaKnown RBP13.37□□□□□ -0.27
LGR5-206ENST00000550851 MYO1BO43795 1136 aa13.37□□□□□ -0.27
LGR5-206ENST00000550851 TNNI2P48788 182 aa13.37□□□□□ -0.27
LGR5-206ENST00000550851 CHRNDQ07001 517 aa13.37□□□□□ -0.27
LGR5-206ENST00000550851 SLFNL1Q499Z3 407 aa13.37□□□□□ -0.27
LGR5-206ENST00000550851 CCDC186Q7Z3E2 898 aa13.37□□□□□ -0.27
LGR5-206ENST00000550851 LUZP1Q86V48 1076 aa13.37□□□□□ -0.27
LGR5-206ENST00000550851 CALML4Q96GE6 196 aa13.37□□□□□ -0.27
LGR5-206ENST00000550851 SPECC1Q5M775 1068 aa13.37□□□□□ -0.27
LGR5-206ENST00000550851 FAM196AQ6ZSG2 479 aa13.37□□□□□ -0.27
LGR5-206ENST00000550851 NLRP10Q86W26 655 aa13.37□□□□□ -0.27
LGR5-206ENST00000550851 PLCG2P16885 1265 aa13.36□□□□□ -0.27
LGR5-206ENST00000550851 IBSPP21815 317 aaPredicted RBP13.36□□□□□ -0.27
LGR5-206ENST00000550851 FAM47AQ5JRC9 791 aa13.36□□□□□ -0.27
LGR5-206ENST00000550851 LRRC7Q96NW7 1537 aa13.36□□□□□ -0.27
LGR5-206ENST00000550851 TRIM37O94972 964 aa13.36□□□□□ -0.27
LGR5-206ENST00000550851 ADD1P35611 737 aaKnown RBP13.36□□□□□ -0.27
LGR5-206ENST00000550851 SKIDA1Q1XH10 827 aa13.36□□□□□ -0.27
LGR5-206ENST00000550851 ERCC4Q92889 916 aaPredicted RBP13.36□□□□□ -0.27
LGR5-206ENST00000550851 SAMM50Q9Y512 469 aa13.36□□□□□ -0.27
LGR5-206ENST00000550851 CLTCQ00610 1675 aaKnown RBP13.36□□□□□ -0.27
LGR5-206ENST00000550851 CAMSAP1Q5T5Y3 1602 aa13.36□□□□□ -0.27
LGR5-206ENST00000550851 STX17P56962 302 aa13.36□□□□□ -0.27
LGR5-206ENST00000550851 TCP10Q12799 353 aa13.36□□□□□ -0.27
LGR5-206ENST00000550851 ZNF771Q7L3S4 317 aaPredicted RBP13.36□□□□□ -0.27
LGR5-206ENST00000550851 TMEM87BQ96K49 555 aa13.36□□□□□ -0.27
LGR5-206ENST00000550851 QTRT2Q9H974 415 aaKnown RBP13.36□□□□□ -0.27
LGR5-206ENST00000550851 MTIF2P46199 727 aaKnown RBP13.35□□□□□ -0.27
LGR5-206ENST00000550851 ZNF174Q15697 407 aa13.35□□□□□ -0.27
LGR5-206ENST00000550851 DPP8Q6V1X1 898 aaPredicted RBP13.35□□□□□ -0.27
LGR5-206ENST00000550851 DIS3L2Q8IYB7 885 aaKnown RBP13.35□□□□□ -0.27
LGR5-206ENST00000550851 TM6SF1Q9BZW5 370 aa13.35□□□□□ -0.27
LGR5-206ENST00000550851 LSG1Q9H089 658 aaKnown RBP13.35□□□□□ -0.27
LGR5-206ENST00000550851 DNAJC5Q9H3Z4 198 aa13.35□□□□□ -0.27
LGR5-206ENST00000550851 GTF2IP78347 998 aa13.35□□□□□ -0.27
LGR5-206ENST00000550851 KIAA1328Q86T90 577 aa13.35□□□□□ -0.27
LGR5-206ENST00000550851 TGFBRAP1Q8WUH2 860 aa13.35□□□□□ -0.27
LGR5-206ENST00000550851 NUP88Q99567 741 aaPredicted RBP13.35□□□□□ -0.27
LGR5-206ENST00000550851 KCNJ14Q9UNX9 436 aa13.35□□□□□ -0.27
LGR5-206ENST00000550851 CYP21A2P08686 494 aa13.35□□□□□ -0.27
LGR5-206ENST00000550851 LIG1P18858 919 aa13.35□□□□□ -0.27
LGR5-206ENST00000550851 DNA2P51530 1060 aa13.35□□□□□ -0.27
LGR5-206ENST00000550851 CCDC178Q5BJE1 867 aa13.35□□□□□ -0.27
LGR5-206ENST00000550851 TCERG1LQ5VWI1 586 aa13.35□□□□□ -0.27
LGR5-206ENST00000550851 CCDC148Q8NFR7 591 aa13.35□□□□□ -0.27
LGR5-206ENST00000550851 DSCC1Q9BVC3 393 aa13.35□□□□□ -0.27
LGR5-206ENST00000550851 RBSNQ9H1K0 784 aa13.35□□□□□ -0.27
LGR5-206ENST00000550851 PTCH1Q13635 1447 aa13.35□□□□□ -0.27
LGR5-206ENST00000550851 STAT6P42226 847 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 WDR66Q8TBY9 1149 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 GPCPD1Q9NPB8 672 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 SRP68Q9UHB9 627 aaKnown RBP13.34□□□□□ -0.27
LGR5-206ENST00000550851 NEXMIFQ5QGS0 1516 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 ADAMTS13Q76LX8 1427 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 N4BP3O15049 544 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 URI1O94763 535 aaPredicted RBP13.34□□□□□ -0.27
LGR5-206ENST00000550851 BRD1O95696 1058 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 CALM1P0DP23 149 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 CALM2P0DP24 149 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 CALM3P0DP25 149 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 MATR3P43243 847 aaKnown RBP eCLIP13.34□□□□□ -0.274e-7■■□□□ 11.4
LGR5-206ENST00000550851 RRAGBQ5VZM2 374 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 CACNA2D4Q7Z3S7 1137 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 MAP4K1Q92918 833 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 EYA3Q99504 573 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 LMBRD1Q9NUN5 540 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 VWA3AA6NCI4 1184 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 UBASH3AP57075 661 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 HSP90B2PQ58FF3 399 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 AKNAD1Q5T1N1 836 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 TTC6Q86TZ1 520 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 UIMC1Q96RL1 719 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 HDAC9Q9UKV0 1011 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 RTL9Q8NET4 1388 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 CPS1P31327 1500 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 RIMBP3CA6NJZ7 1639 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 RIMBP3BA6NNM3 1639 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 RIMBP3Q9UFD9 1639 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 TNNT1P13805 278 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 MFSD14BQ5SR56 506 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 JDP2Q8WYK2 163 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 RUFY1Q96T51 708 aa13.34□□□□□ -0.27
LGR5-206ENST00000550851 KRT2P35908 639 aa13.33□□□□□ -0.28
LGR5-206ENST00000550851 TNIP1Q15025 636 aa13.33□□□□□ -0.28
LGR5-206ENST00000550851 BRAPQ7Z569 592 aa13.33□□□□□ -0.28
LGR5-206ENST00000550851 TRIM47Q96LD4 638 aa13.33□□□□□ -0.28
LGR5-206ENST00000550851 ZSWIM6Q9HCJ5 1215 aa13.33□□□□□ -0.28
LGR5-206ENST00000550851 ATG3Q9NT62 314 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms