RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.97■■□□□ 1.75
CACNB3-218ENST00000550771 GJA5P36382 358 aa25.96■■□□□ 1.75
CACNB3-218ENST00000550771 OTUD7BQ6GQQ9 843 aa25.96■■□□□ 1.75
CACNB3-218ENST00000550771 SSH1Q8WYL5 1049 aa25.96■■□□□ 1.75
CACNB3-218ENST00000550771 TEPSINQ96N21 525 aa25.96■■□□□ 1.75
CACNB3-218ENST00000550771 TESPA1A2RU30 521 aaPredicted RBP25.95■■□□□ 1.74
CACNB3-218ENST00000550771 TNNI2P48788 182 aa25.95■■□□□ 1.74
CACNB3-218ENST00000550771 USP44Q9H0E7 712 aa25.95■■□□□ 1.74
CACNB3-218ENST00000550771 KIF16BQ96L93 1317 aa25.93■■□□□ 1.74
CACNB3-218ENST00000550771 TCP10L2B9ZVM9 353 aa25.93■■□□□ 1.74
CACNB3-218ENST00000550771 FRAT2O75474 233 aaPredicted RBP25.93■■□□□ 1.74
CACNB3-218ENST00000550771 CHAF1AQ13111 956 aaPredicted RBP25.93■■□□□ 1.74
CACNB3-218ENST00000550771 GRIK5Q16478 980 aa25.93■■□□□ 1.74
CACNB3-218ENST00000550771 MRIQ9BWK5 157 aa25.93■■□□□ 1.74
CACNB3-218ENST00000550771 IQSEC3Q9UPP2 1182 aaPredicted RBP25.93■■□□□ 1.74
CACNB3-218ENST00000550771 ARAP2Q8WZ64 1704 aa25.93■■□□□ 1.74
CACNB3-218ENST00000550771 LAMB1P07942 1786 aa25.92■■□□□ 1.74
CACNB3-218ENST00000550771 SLFN5Q08AF3 891 aa25.92■■□□□ 1.74
CACNB3-218ENST00000550771 TEKT1Q969V4 418 aa25.92■■□□□ 1.74
CACNB3-218ENST00000550771 OPTNQ96CV9 577 aa25.92■■□□□ 1.74
CACNB3-218ENST00000550771 SUGT1Q9Y2Z0 365 aa25.92■■□□□ 1.74
CACNB3-218ENST00000550771 PUM3Q15397 648 aaKnown RBP25.91■■□□□ 1.74
CACNB3-218ENST00000550771 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.91■■□□□ 1.74
CACNB3-218ENST00000550771 CDAN1Q8IWY9 1227 aa25.91■■□□□ 1.74
CACNB3-218ENST00000550771 KLHDC4Q8TBB5 520 aa25.91■■□□□ 1.74
CACNB3-218ENST00000550771 TMEM39BQ9GZU3 492 aa25.91■■□□□ 1.74
CACNB3-218ENST00000550771 ELP3Q9H9T3 547 aa25.91■■□□□ 1.74
CACNB3-218ENST00000550771 TRIM17Q9Y577 477 aa25.91■■□□□ 1.74
CACNB3-218ENST00000550771 IFIT1P09914 478 aaKnown RBP25.9■■□□□ 1.74
CACNB3-218ENST00000550771 FGFR2P21802 821 aa25.9■■□□□ 1.74
CACNB3-218ENST00000550771 BCAMP50895 628 aa25.9■■□□□ 1.74
CACNB3-218ENST00000550771 MAP3K9P80192 1104 aa25.9■■□□□ 1.74
CACNB3-218ENST00000550771 CRHR2Q13324 411 aa25.9■■□□□ 1.74
CACNB3-218ENST00000550771 ALDH1L2Q3SY69 923 aa25.9■■□□□ 1.74
CACNB3-218ENST00000550771 OTOP1Q7RTM1 612 aa25.9■■□□□ 1.74
CACNB3-218ENST00000550771 ERO1AQ96HE7 468 aa25.9■■□□□ 1.74
CACNB3-218ENST00000550771 ZDHHC15Q96MV8 337 aa25.9■■□□□ 1.74
CACNB3-218ENST00000550771 PTPN18Q99952 460 aa25.9■■□□□ 1.74
CACNB3-218ENST00000550771 PDE4DIPQ5VU43 2346 aa25.89■■□□□ 1.74
CACNB3-218ENST00000550771 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.89■■□□□ 1.74
CACNB3-218ENST00000550771 MS4A4AQ96JQ5 239 aa25.89■■□□□ 1.74
CACNB3-218ENST00000550771 MAST3O60307 1309 aa25.88■■□□□ 1.73
CACNB3-218ENST00000550771 VGLL4Q14135 290 aa25.88■■□□□ 1.73
CACNB3-218ENST00000550771 EYA2O00167 538 aa25.87■■□□□ 1.73
CACNB3-218ENST00000550771 RFX5P48382 616 aaPredicted RBP25.87■■□□□ 1.73
CACNB3-218ENST00000550771 FKBP1CQ5VVH2 108 aa25.87■■□□□ 1.73
CACNB3-218ENST00000550771 FAM83AQ86UY5 434 aa25.87■■□□□ 1.73
CACNB3-218ENST00000550771 TMOD2Q9NZR1 351 aa25.87■■□□□ 1.73
CACNB3-218ENST00000550771 CSADQ9Y600 493 aa25.87■■□□□ 1.73
CACNB3-218ENST00000550771 APOBEC3HQ6NTF7 200 aaKnown RBP25.86■■□□□ 1.73
CACNB3-218ENST00000550771 LPIN2Q92539 896 aa25.86■■□□□ 1.73
CACNB3-218ENST00000550771 SLC5A1P13866 664 aa25.85■■□□□ 1.73
CACNB3-218ENST00000550771 GTF2A2P52657 109 aa25.85■■□□□ 1.73
CACNB3-218ENST00000550771 PRPF38BQ5VTL8 546 aaKnown RBP25.85■■□□□ 1.73
CACNB3-218ENST00000550771 INTS3Q68E01 1043 aaKnown RBP25.85■■□□□ 1.73
CACNB3-218ENST00000550771 HHIPL2Q6UWX4 724 aa25.85■■□□□ 1.73
CACNB3-218ENST00000550771 SMC4Q9NTJ3 1288 aa25.85■■□□□ 1.73
CACNB3-218ENST00000550771 OTOFQ9HC10 1997 aa25.84■■□□□ 1.73
CACNB3-218ENST00000550771 CACNB3P54284 484 aa25.84■■□□□ 1.73
CACNB3-218ENST00000550771 SP3Q02447 781 aa25.84■■□□□ 1.73
CACNB3-218ENST00000550771 WDR66Q8TBY9 1149 aa25.84■■□□□ 1.73
CACNB3-218ENST00000550771 CNKSR2Q8WXI2 1034 aa25.84■■□□□ 1.73
CACNB3-218ENST00000550771 BRI3BPQ8WY22 251 aa25.84■■□□□ 1.73
CACNB3-218ENST00000550771 HOOK2Q96ED9 719 aa25.84■■□□□ 1.73
CACNB3-218ENST00000550771 TNRC18O15417 2968 aaPredicted RBP25.84■■□□□ 1.73
CACNB3-218ENST00000550771 CD99L2Q8TCZ2 262 aa25.83■■□□□ 1.73
CACNB3-218ENST00000550771 FBXO3Q9UK99 471 aa25.83■■□□□ 1.73
CACNB3-218ENST00000550771 PTPN22Q9Y2R2 807 aa25.83■■□□□ 1.73
CACNB3-218ENST00000550771 CCL15-CCL14A0A0B4J2E2 113 aa25.82■■□□□ 1.72
CACNB3-218ENST00000550771 SPDYE5A6NIY4 337 aa25.82■■□□□ 1.72
CACNB3-218ENST00000550771 CT47B1P0C2W7 299 aaPredicted RBP25.82■■□□□ 1.72
CACNB3-218ENST00000550771 CCL15Q16663 113 aa25.82■■□□□ 1.72
CACNB3-218ENST00000550771 TRMT2AQ8IZ69 625 aaKnown RBP25.82■■□□□ 1.72
CACNB3-218ENST00000550771 CDCA7LQ96GN5 454 aa25.82■■□□□ 1.72
CACNB3-218ENST00000550771 EFCC1Q9HA90 598 aa25.82■■□□□ 1.72
CACNB3-218ENST00000550771 ATG9AQ7Z3C6 839 aa25.81■■□□□ 1.72
CACNB3-218ENST00000550771 OTUD5Q96G74 571 aa25.81■■□□□ 1.72
CACNB3-218ENST00000550771 ZFYVE28Q9HCC9 887 aa25.81■■□□□ 1.72
CACNB3-218ENST00000550771 RPAP1Q9BWH6 1393 aaPredicted RBP25.81■■□□□ 1.72
CACNB3-218ENST00000550771 CIAO1O76071 339 aa25.8■■□□□ 1.72
CACNB3-218ENST00000550771 UBTFL1P0CB47 393 aaPredicted RBP25.8■■□□□ 1.72
CACNB3-218ENST00000550771 ERO1BQ86YB8 467 aa25.8■■□□□ 1.72
CACNB3-218ENST00000550771 WRNIP1Q96S55 665 aa25.8■■□□□ 1.72
CACNB3-218ENST00000550771 SNCAIPQ9Y6H5 919 aa25.8■■□□□ 1.72
CACNB3-218ENST00000550771 TAF1CQ15572 869 aaPredicted RBP25.79■■□□□ 1.72
CACNB3-218ENST00000550771 DCAF15Q66K64 600 aa25.79■■□□□ 1.72
CACNB3-218ENST00000550771 HDAC5Q9UQL6 1122 aa25.79■■□□□ 1.72
CACNB3-218ENST00000550771 ARHGEF6Q15052 776 aa25.78■■□□□ 1.72
CACNB3-218ENST00000550771 ARMC5Q96C12 935 aa25.78■■□□□ 1.72
CACNB3-218ENST00000550771 ZCCHC17Q9NP64 241 aaKnown RBP25.78■■□□□ 1.72
CACNB3-218ENST00000550771 CETPP11597 493 aa25.77■■□□□ 1.72
CACNB3-218ENST00000550771 FAM43AQ8N2R8 423 aa25.77■■□□□ 1.72
CACNB3-218ENST00000550771 GNL3LQ9NVN8 582 aaKnown RBP25.77■■□□□ 1.72
CACNB3-218ENST00000550771 CEP126Q9P2H0 1117 aa25.77■■□□□ 1.72
CACNB3-218ENST00000550771 WDHD1O75717 1129 aaPredicted RBP25.76■■□□□ 1.71
CACNB3-218ENST00000550771 CAP1Q01518 475 aa25.76■■□□□ 1.71
CACNB3-218ENST00000550771 ATP2B3Q16720 1220 aa25.76■■□□□ 1.71
CACNB3-218ENST00000550771 ZKSCAN4Q969J2 545 aaPredicted RBP25.76■■□□□ 1.71
CACNB3-218ENST00000550771 API5Q9BZZ5 524 aaKnown RBP25.76■■□□□ 1.71
CACNB3-218ENST00000550771 NOB1Q9ULX3 412 aaKnown RBP25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms