RNA–Protein interactions for RNA: ENST00000550647.5

RAB3IP-213, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-213ENST00000550647 NANOS1Q8WY41 292 aaKnown RBP7.6□□□□□ -1.19
RAB3IP-213ENST00000550647 TRERF1Q96PN7 1200 aa7.6□□□□□ -1.19
RAB3IP-213ENST00000550647 GMPR2Q9P2T1 348 aaKnown RBP7.6□□□□□ -1.19
RAB3IP-213ENST00000550647 SBNO2Q9Y2G9 1366 aa7.59□□□□□ -1.19
RAB3IP-213ENST00000550647 EIF4EBP3O60516 100 aaPredicted RBP7.59□□□□□ -1.19
RAB3IP-213ENST00000550647 IMPDH2P12268 514 aa7.59□□□□□ -1.19
RAB3IP-213ENST00000550647 PTPRAP18433 802 aa7.59□□□□□ -1.19
RAB3IP-213ENST00000550647 MLLT1Q03111 559 aaPredicted RBP7.59□□□□□ -1.19
RAB3IP-213ENST00000550647 ZNF252P-AS1Q0IIN9 211 aa7.59□□□□□ -1.19
RAB3IP-213ENST00000550647 ZNF423Q2M1K9 1284 aa7.59□□□□□ -1.19
RAB3IP-213ENST00000550647 CWF19L2Q2TBE0 894 aaKnown RBP7.59□□□□□ -1.19
RAB3IP-213ENST00000550647 RASIP1Q5U651 963 aa7.59□□□□□ -1.19
RAB3IP-213ENST00000550647 DIEXFQ68CQ4 756 aaKnown RBP7.59□□□□□ -1.19
RAB3IP-213ENST00000550647 BNC2Q6ZN30 1099 aaPredicted RBP7.59□□□□□ -1.19
RAB3IP-213ENST00000550647 ZNF662Q6ZS27 426 aa7.59□□□□□ -1.19
RAB3IP-213ENST00000550647 REC114Q7Z4M0 266 aa7.59□□□□□ -1.19
RAB3IP-213ENST00000550647 CPLX3Q8WVH0 158 aa7.59□□□□□ -1.19
RAB3IP-213ENST00000550647 GAL3ST3Q96A11 431 aa7.59□□□□□ -1.19
RAB3IP-213ENST00000550647 EMILIN2Q9BXX0 1053 aa7.59□□□□□ -1.19
RAB3IP-213ENST00000550647 TRIM55Q9BYV6 548 aa7.59□□□□□ -1.19
RAB3IP-213ENST00000550647 CACNA2D2Q9NY47 1150 aa7.59□□□□□ -1.19
RAB3IP-213ENST00000550647 DACH1Q9UI36 760 aa7.59□□□□□ -1.19
RAB3IP-213ENST00000550647 PRR12Q9ULL5 1215 aa7.59□□□□□ -1.19
RAB3IP-213ENST00000550647 ZNRF3Q9ULT6 936 aa7.59□□□□□ -1.19
RAB3IP-213ENST00000550647 MRVI1Q9Y6F6 885 aa7.59□□□□□ -1.19
RAB3IP-213ENST00000550647 U2SURPO15042 1029 aaKnown RBP7.58□□□□□ -1.2
RAB3IP-213ENST00000550647 EIF2AK2P19525 551 aaKnown RBP7.58□□□□□ -1.2
RAB3IP-213ENST00000550647 ARNTP27540 789 aa7.58□□□□□ -1.2
RAB3IP-213ENST00000550647 ZNF165P49910 485 aa7.58□□□□□ -1.2
RAB3IP-213ENST00000550647 TCEAL1Q15170 157 aa7.58□□□□□ -1.2
RAB3IP-213ENST00000550647 SEZ6Q53EL9 994 aa7.58□□□□□ -1.2
RAB3IP-213ENST00000550647 CEP135Q66GS9 1140 aa7.58□□□□□ -1.2
RAB3IP-213ENST00000550647 HNRNPLLQ8WVV9 542 aaKnown RBP7.58□□□□□ -1.2
RAB3IP-213ENST00000550647 PLD4Q96BZ4 506 aa7.58□□□□□ -1.2
RAB3IP-213ENST00000550647 UBE2OQ9C0C9 1292 aaKnown RBP7.58□□□□□ -1.2
RAB3IP-213ENST00000550647 CCDC113Q9H0I3 377 aa7.58□□□□□ -1.2
RAB3IP-213ENST00000550647 SNTG2Q9NY99 539 aa7.58□□□□□ -1.2
RAB3IP-213ENST00000550647 SLC6A14Q9UN76 642 aa7.58□□□□□ -1.2
RAB3IP-213ENST00000550647 PCDHB5Q9Y5E4 795 aa7.58□□□□□ -1.2
RAB3IP-213ENST00000550647 C2CD2LO14523 706 aa7.57□□□□□ -1.2
RAB3IP-213ENST00000550647 ATE1O95260 518 aa7.57□□□□□ -1.2
RAB3IP-213ENST00000550647 ESRRAP11474 423 aaPredicted RBP7.57□□□□□ -1.2
RAB3IP-213ENST00000550647 EIF6P56537 245 aaKnown RBP7.57□□□□□ -1.2
RAB3IP-213ENST00000550647 LLGL2Q6P1M3 1020 aa7.57□□□□□ -1.2
RAB3IP-213ENST00000550647 HFE2Q6ZVN8 426 aa7.57□□□□□ -1.2
RAB3IP-213ENST00000550647 PDZD3Q86UT5 571 aa7.57□□□□□ -1.2
RAB3IP-213ENST00000550647 SULF2Q8IWU5 870 aa7.57□□□□□ -1.2
RAB3IP-213ENST00000550647 SOX17Q9H6I2 414 aaPredicted RBP7.57□□□□□ -1.2
RAB3IP-213ENST00000550647 EHMT1Q9H9B1 1298 aa7.57□□□□□ -1.2
RAB3IP-213ENST00000550647 PPT2Q9UMR5 302 aa7.57□□□□□ -1.2
RAB3IP-213ENST00000550647 MRPL42Q9Y6G3 142 aaKnown RBP7.57□□□□□ -1.2
RAB3IP-213ENST00000550647 SMAD7O15105 426 aaKnown RBP7.56□□□□□ -1.2
RAB3IP-213ENST00000550647 PPM1GO15355 546 aaPredicted RBP7.56□□□□□ -1.2
RAB3IP-213ENST00000550647 TRIM37O94972 964 aa7.56□□□□□ -1.2
RAB3IP-213ENST00000550647 ARAFP10398 606 aa7.56□□□□□ -1.2
RAB3IP-213ENST00000550647 LMNB1P20700 586 aa7.56□□□□□ -1.2
RAB3IP-213ENST00000550647 AP3B2Q13367 1082 aa7.56□□□□□ -1.2
RAB3IP-213ENST00000550647 ADAMTSL4Q6UY14 1074 aa7.56□□□□□ -1.2
RAB3IP-213ENST00000550647 FAM35AQ86V20 835 aa7.56□□□□□ -1.2
RAB3IP-213ENST00000550647 FBXO27Q8NI29 283 aa7.56□□□□□ -1.2
RAB3IP-213ENST00000550647 ANAPC16Q96DE5 110 aa7.56□□□□□ -1.2
RAB3IP-213ENST00000550647 RNPC3Q96LT9 517 aaKnown RBP7.56□□□□□ -1.2
RAB3IP-213ENST00000550647 DEPDC7Q96QD5 511 aa7.56□□□□□ -1.2
RAB3IP-213ENST00000550647 LPIN3Q9BQK8 851 aa7.56□□□□□ -1.2
RAB3IP-213ENST00000550647 NAGPAQ9UK23 515 aa7.56□□□□□ -1.2
RAB3IP-213ENST00000550647 PPFIA3O75145 1194 aa7.55□□□□□ -1.2
RAB3IP-213ENST00000550647 CASP7P55210 303 aa7.55□□□□□ -1.2
RAB3IP-213ENST00000550647 RPL6Q02878 288 aaKnown RBP7.55□□□□□ -1.2
RAB3IP-213ENST00000550647 PERM1Q5SV97 790 aa7.55□□□□□ -1.2
RAB3IP-213ENST00000550647 FAM169BQ8N8A8 192 aa7.55□□□□□ -1.2
RAB3IP-213ENST00000550647 C19orf47Q8N9M1 422 aaKnown RBP7.55□□□□□ -1.2
RAB3IP-213ENST00000550647 DDX54Q8TDD1 881 aaKnown RBP7.55□□□□□ -1.2
RAB3IP-213ENST00000550647 STK35Q8TDR2 534 aa7.55□□□□□ -1.2
RAB3IP-213ENST00000550647 SRPK1Q96SB4 655 aaKnown RBP7.55□□□□□ -1.2
RAB3IP-213ENST00000550647 BRINP2Q9C0B6 783 aa7.55□□□□□ -1.2
RAB3IP-213ENST00000550647 TMX1Q9H3N1 280 aa7.55□□□□□ -1.2
RAB3IP-213ENST00000550647 R3HCC1Q9Y3T6 440 aaKnown RBP7.55□□□□□ -1.2
RAB3IP-213ENST00000550647 TLR3O15455 904 aaKnown RBP7.54□□□□□ -1.2
RAB3IP-213ENST00000550647 BMP4P12644 408 aa7.54□□□□□ -1.2
RAB3IP-213ENST00000550647 ADH6P28332 368 aa7.54□□□□□ -1.2
RAB3IP-213ENST00000550647 ADH7P40394 386 aa7.54□□□□□ -1.2
RAB3IP-213ENST00000550647 SEPT6Q14141 434 aa7.54□□□□□ -1.2
RAB3IP-213ENST00000550647 PLEKHG4Q58EX7 1191 aa7.54□□□□□ -1.2
RAB3IP-213ENST00000550647 SV2AQ7L0J3 742 aa7.54□□□□□ -1.2
RAB3IP-213ENST00000550647 FERD3LQ96RJ6 166 aa7.54□□□□□ -1.2
RAB3IP-213ENST00000550647 BRMS1Q9HCU9 246 aa7.54□□□□□ -1.2
RAB3IP-213ENST00000550647 KLF15Q9UIH9 416 aa7.54□□□□□ -1.2
RAB3IP-213ENST00000550647 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.54□□□□□ -1.2
RAB3IP-213ENST00000550647 PRR36Q9H6K5 1346 aa7.53□□□□□ -1.2
RAB3IP-213ENST00000550647 CPB1P15086 417 aa7.53□□□□□ -1.2
RAB3IP-213ENST00000550647 RASGRF1Q13972 1273 aa7.53□□□□□ -1.2
RAB3IP-213ENST00000550647 DDR2Q16832 855 aa7.53□□□□□ -1.2
RAB3IP-213ENST00000550647 CCDC81Q6ZN84 652 aa7.53□□□□□ -1.2
RAB3IP-213ENST00000550647 MICALL1Q8N3F8 863 aa7.53□□□□□ -1.2
RAB3IP-213ENST00000550647 WNT8BQ93098 351 aa7.53□□□□□ -1.2
RAB3IP-213ENST00000550647 ZNF775Q96BV0 537 aaPredicted RBP7.53□□□□□ -1.2
RAB3IP-213ENST00000550647 SMG9Q9H0W8 520 aaKnown RBP7.53□□□□□ -1.2
RAB3IP-213ENST00000550647 ACTR10Q9NZ32 417 aa7.53□□□□□ -1.2
RAB3IP-213ENST00000550647 FAM221BA6H8Z2 402 aa7.52□□□□□ -1.21
RAB3IP-213ENST00000550647 MEIS3P2A8K0S8 358 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms