RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 BTBD11A6QL63 1104 aa7.85□□□□□ -1.15
DEPDC4-209ENST00000550587 IL6STP40189 918 aaPredicted RBP7.85□□□□□ -1.15
DEPDC4-209ENST00000550587 EIF5P55010 431 aaKnown RBP7.85□□□□□ -1.15
DEPDC4-209ENST00000550587 RASSF7Q02833 373 aa7.85□□□□□ -1.15
DEPDC4-209ENST00000550587 TWISTNBQ3B726 338 aaPredicted RBP7.85□□□□□ -1.15
DEPDC4-209ENST00000550587 ZNF790Q6PG37 636 aa7.85□□□□□ -1.15
DEPDC4-209ENST00000550587 SH3RF1Q7Z6J0 888 aa7.85□□□□□ -1.15
DEPDC4-209ENST00000550587 TSPYL6Q8N831 410 aa7.85□□□□□ -1.15
DEPDC4-209ENST00000550587 CNBD1Q8NA66 436 aa7.85□□□□□ -1.15
DEPDC4-209ENST00000550587 ARMC2Q8NEN0 867 aa7.85□□□□□ -1.15
DEPDC4-209ENST00000550587 HELBQ8NG08 1087 aaPredicted RBP7.85□□□□□ -1.15
DEPDC4-209ENST00000550587 C1QTNF2Q9BXJ5 285 aa7.85□□□□□ -1.15
DEPDC4-209ENST00000550587 CHMP4AQ9BY43 222 aa7.85□□□□□ -1.15
DEPDC4-209ENST00000550587 KRTAP4-6Q9BYQ5 205 aa7.85□□□□□ -1.15
DEPDC4-209ENST00000550587 ZNF652Q9Y2D9 606 aa7.85□□□□□ -1.15
DEPDC4-209ENST00000550587 TJP1Q07157 1748 aa7.85□□□□□ -1.15
DEPDC4-209ENST00000550587 CARMIL3Q8ND23 1372 aa7.84□□□□□ -1.15
DEPDC4-209ENST00000550587 SBF1O95248 1867 aa7.84□□□□□ -1.15
DEPDC4-209ENST00000550587 MAGEB6P1A0A0J9YX57 407 aa7.84□□□□□ -1.15
DEPDC4-209ENST00000550587 ELL2O00472 640 aaPredicted RBP7.84□□□□□ -1.15
DEPDC4-209ENST00000550587 C21orf2O43822 256 aa7.84□□□□□ -1.15
DEPDC4-209ENST00000550587 PLIN1O60240 522 aa7.84□□□□□ -1.15
DEPDC4-209ENST00000550587 FSHRP23945 695 aa7.84□□□□□ -1.15
DEPDC4-209ENST00000550587 HTRA3P83110 453 aa7.84□□□□□ -1.15
DEPDC4-209ENST00000550587 PDE3AQ14432 1141 aa7.84□□□□□ -1.15
DEPDC4-209ENST00000550587 SH3BP5LQ7L8J4 393 aa7.84□□□□□ -1.15
DEPDC4-209ENST00000550587 ZSCAN1Q8NBB4 408 aa7.84□□□□□ -1.15
DEPDC4-209ENST00000550587 SSH1Q8WYL5 1049 aa7.84□□□□□ -1.15
DEPDC4-209ENST00000550587 TBC1D2BQ9UPU7 963 aa7.84□□□□□ -1.15
DEPDC4-209ENST00000550587 HEG1Q9ULI3 1381 aa7.84□□□□□ -1.16
DEPDC4-209ENST00000550587 MRC1P22897 1456 aa7.83□□□□□ -1.16
DEPDC4-209ENST00000550587 IQCA1LA6NCM1 817 aa7.83□□□□□ -1.16
DEPDC4-209ENST00000550587 IPO8O15397 1037 aaKnown RBP7.83□□□□□ -1.16
DEPDC4-209ENST00000550587 HOXB7P09629 217 aa7.83□□□□□ -1.16
DEPDC4-209ENST00000550587 GTF2E1P29083 439 aaPredicted RBP7.83□□□□□ -1.16
DEPDC4-209ENST00000550587 EIF4A1P60842 406 aaKnown RBP7.83□□□□□ -1.16
DEPDC4-209ENST00000550587 IRX6P78412 446 aaPredicted RBP7.83□□□□□ -1.16
DEPDC4-209ENST00000550587 CTDSPL2Q05D32 466 aa7.83□□□□□ -1.16
DEPDC4-209ENST00000550587 TBC1D9BQ66K14 1250 aa7.83□□□□□ -1.16
DEPDC4-209ENST00000550587 VASH1Q7L8A9 365 aaPredicted RBP7.83□□□□□ -1.16
DEPDC4-209ENST00000550587 DZIP3Q86Y13 1208 aaKnown RBP7.83□□□□□ -1.16
DEPDC4-209ENST00000550587 ARHGAP45Q92619 1136 aa7.83□□□□□ -1.16
DEPDC4-209ENST00000550587 MASTLQ96GX5 879 aa7.83□□□□□ -1.16
DEPDC4-209ENST00000550587 ZNF496Q96IT1 587 aaPredicted RBP7.83□□□□□ -1.16
DEPDC4-209ENST00000550587 TAOK3Q9H2K8 898 aa7.83□□□□□ -1.16
DEPDC4-209ENST00000550587 SMC4Q9NTJ3 1288 aa7.83□□□□□ -1.16
DEPDC4-209ENST00000550587 SIPA1L3O60292 1781 aaPredicted RBP7.83□□□□□ -1.16
DEPDC4-209ENST00000550587 AFDNP55196 1824 aaKnown RBP7.82□□□□□ -1.16
DEPDC4-209ENST00000550587 MAN1A2O60476 641 aa7.82□□□□□ -1.16
DEPDC4-209ENST00000550587 BMP2P12643 396 aa7.82□□□□□ -1.16
DEPDC4-209ENST00000550587 STYK1Q6J9G0 422 aa7.82□□□□□ -1.16
DEPDC4-209ENST00000550587 PRR5LQ6MZQ0 368 aa7.82□□□□□ -1.16
DEPDC4-209ENST00000550587 CLEC4GQ6UXB4 293 aa7.82□□□□□ -1.16
DEPDC4-209ENST00000550587 TPTE2Q6XPS3 522 aa7.82□□□□□ -1.16
DEPDC4-209ENST00000550587 NBPF5PQ86XG9 351 aaPredicted RBP7.82□□□□□ -1.16
DEPDC4-209ENST00000550587 CACNA1FO60840 1977 aa7.82□□□□□ -1.16
DEPDC4-209ENST00000550587 KDM3BQ7LBC6 1761 aa7.82□□□□□ -1.16
DEPDC4-209ENST00000550587 KIF16BQ96L93 1317 aa7.81□□□□□ -1.16
DEPDC4-209ENST00000550587 LTBP3Q9NS15 1303 aa7.81□□□□□ -1.16
DEPDC4-209ENST00000550587 NFKBIEO00221 500 aa7.81□□□□□ -1.16
DEPDC4-209ENST00000550587 KCNQ3O43525 872 aa7.81□□□□□ -1.16
DEPDC4-209ENST00000550587 A1BGP04217 495 aa7.81□□□□□ -1.16
DEPDC4-209ENST00000550587 SNRPA1P09661 255 aaKnown RBP7.81□□□□□ -1.16
DEPDC4-209ENST00000550587 ALDH1B1P30837 517 aa7.81□□□□□ -1.16
DEPDC4-209ENST00000550587 KRT24Q2M2I5 525 aa7.81□□□□□ -1.16
DEPDC4-209ENST00000550587 CCDC30Q5VVM6 783 aa7.81□□□□□ -1.16
DEPDC4-209ENST00000550587 ZKSCAN2Q63HK3 967 aa7.81□□□□□ -1.16
DEPDC4-209ENST00000550587 TRMT44Q8IYL2 757 aaKnown RBP7.81□□□□□ -1.16
DEPDC4-209ENST00000550587 LINC00528Q8N1L1 170 aa7.81□□□□□ -1.16
DEPDC4-209ENST00000550587 MEIOBQ8N635 442 aa7.81□□□□□ -1.16
DEPDC4-209ENST00000550587 FRAT1Q92837 279 aaPredicted RBP7.81□□□□□ -1.16
DEPDC4-209ENST00000550587 TMX4Q9H1E5 349 aaPredicted RBP7.81□□□□□ -1.16
DEPDC4-209ENST00000550587 PPP4R2Q9NY27 417 aa7.81□□□□□ -1.16
DEPDC4-209ENST00000550587 CCDC88AQ3V6T2 1871 aa7.81□□□□□ -1.16
DEPDC4-209ENST00000550587 NRXN2Q9P2S2 1712 aa7.81□□□□□ -1.16
DEPDC4-209ENST00000550587 HSPA1AP0DMV8 641 aaKnown RBP7.8□□□□□ -1.16
DEPDC4-209ENST00000550587 HSPA1BP0DMV9 641 aaKnown RBP7.8□□□□□ -1.16
DEPDC4-209ENST00000550587 SRGNP10124 158 aa7.8□□□□□ -1.16
DEPDC4-209ENST00000550587 NPR1P16066 1061 aa7.8□□□□□ -1.16
DEPDC4-209ENST00000550587 CCDC93Q567U6 631 aa7.8□□□□□ -1.16
DEPDC4-209ENST00000550587 C20orf194Q5TEA3 1177 aa7.8□□□□□ -1.16
DEPDC4-209ENST00000550587 PRPF40BQ6NWY9 871 aaKnown RBP7.8□□□□□ -1.16
DEPDC4-209ENST00000550587 ATF7IPQ6VMQ6 1270 aa7.8□□□□□ -1.16
DEPDC4-209ENST00000550587 RTKN2Q8IZC4 609 aa7.8□□□□□ -1.16
DEPDC4-209ENST00000550587 LRRN4Q8WUT4 740 aa7.8□□□□□ -1.16
DEPDC4-209ENST00000550587 AIDAQ96BJ3 306 aa7.8□□□□□ -1.16
DEPDC4-209ENST00000550587 BCL2L13Q9BXK5 485 aa7.8□□□□□ -1.16
DEPDC4-209ENST00000550587 NOB1Q9ULX3 412 aaKnown RBP7.8□□□□□ -1.16
DEPDC4-209ENST00000550587 MAP4K5Q9Y4K4 846 aa7.8□□□□□ -1.16
DEPDC4-209ENST00000550587 DLEC1Q9Y238 1755 aa7.79□□□□□ -1.16
DEPDC4-209ENST00000550587 FAM181BA6NEQ2 426 aa7.79□□□□□ -1.16
DEPDC4-209ENST00000550587 DDNO94850 711 aaPredicted RBP7.79□□□□□ -1.16
DEPDC4-209ENST00000550587 CAMTA2O94983 1202 aa7.79□□□□□ -1.16
DEPDC4-209ENST00000550587 UPP2O95045 317 aa7.79□□□□□ -1.16
DEPDC4-209ENST00000550587 TRIM27P14373 513 aa7.79□□□□□ -1.16
DEPDC4-209ENST00000550587 AAMPQ13685 434 aa7.79□□□□□ -1.16
DEPDC4-209ENST00000550587 PNMA8AQ86V59 439 aaPredicted RBP7.79□□□□□ -1.16
DEPDC4-209ENST00000550587 LDHDQ86WU2 507 aa7.79□□□□□ -1.16
DEPDC4-209ENST00000550587 DZIP1LQ8IYY4 767 aaKnown RBP7.79□□□□□ -1.16
DEPDC4-209ENST00000550587 EXOC6Q8TAG9 804 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 182.4 ms