RNA–Protein interactions for RNA: ENST00000550582.2

NR4A1-216, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 5

Gene NR4A1, Length 607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-216ENST00000550582 CCL15-CCL14A0A0B4J2E2 113 aa18.32■□□□□ 0.52
NR4A1-216ENST00000550582 VAMP4O75379 141 aa18.32■□□□□ 0.52
NR4A1-216ENST00000550582 MYCP01106 439 aaPredicted RBP18.32■□□□□ 0.52
NR4A1-216ENST00000550582 VGLL4Q14135 290 aa18.32■□□□□ 0.52
NR4A1-216ENST00000550582 TAF1CQ15572 869 aaPredicted RBP18.32■□□□□ 0.52
NR4A1-216ENST00000550582 CCL15Q16663 113 aa18.32■□□□□ 0.52
NR4A1-216ENST00000550582 DZIP1LQ8IYY4 767 aaKnown RBP18.32■□□□□ 0.52
NR4A1-216ENST00000550582 FAM43AQ8N2R8 423 aa18.32■□□□□ 0.52
NR4A1-216ENST00000550582 ZFYVE28Q9HCC9 887 aa18.32■□□□□ 0.52
NR4A1-216ENST00000550582 HIBADHP31937 336 aaKnown RBP18.31■□□□□ 0.52
NR4A1-216ENST00000550582 FXR1P51114 621 aaKnown RBP eCLIP18.31■□□□□ 0.52
NR4A1-216ENST00000550582 MAP3K9P80192 1104 aa18.31■□□□□ 0.52
NR4A1-216ENST00000550582 SLC9C1Q4G0N8 1177 aa18.31■□□□□ 0.52
NR4A1-216ENST00000550582 OTUD5Q96G74 571 aa18.31■□□□□ 0.52
NR4A1-216ENST00000550582 FAM84BQ96KN1 310 aaPredicted RBP18.31■□□□□ 0.52
NR4A1-216ENST00000550582 CRKP46108 304 aa18.3■□□□□ 0.52
NR4A1-216ENST00000550582 GTF2A2P52657 109 aa18.3■□□□□ 0.52
NR4A1-216ENST00000550582 GRIK5Q16478 980 aa18.3■□□□□ 0.52
NR4A1-216ENST00000550582 NBPF11Q86T75 865 aa18.3■□□□□ 0.52
NR4A1-216ENST00000550582 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.3■□□□□ 0.52
NR4A1-216ENST00000550582 PUS3Q9BZE2 481 aaKnown RBP18.3■□□□□ 0.52
NR4A1-216ENST00000550582 GRM8O00222 908 aa18.29■□□□□ 0.52
NR4A1-216ENST00000550582 TNNI2P48788 182 aa18.29■□□□□ 0.52
NR4A1-216ENST00000550582 EXOSC9Q06265 439 aaKnown RBP18.29■□□□□ 0.52
NR4A1-216ENST00000550582 UBE4AQ14139 1066 aa18.29■□□□□ 0.52
NR4A1-216ENST00000550582 ARHGEF6Q15052 776 aa18.29■□□□□ 0.52
NR4A1-216ENST00000550582 SLC4A8Q2Y0W8 1093 aa18.29■□□□□ 0.52
NR4A1-216ENST00000550582 ARHGAP39Q9C0H5 1083 aa18.29■□□□□ 0.52
NR4A1-216ENST00000550582 COLQQ9Y215 455 aaPredicted RBP18.29■□□□□ 0.52
NR4A1-216ENST00000550582 CSADQ9Y600 493 aa18.29■□□□□ 0.52
NR4A1-216ENST00000550582 CACNB3P54284 484 aa18.28■□□□□ 0.52
NR4A1-216ENST00000550582 SH3TC2Q8TF17 1288 aa18.28■□□□□ 0.52
NR4A1-216ENST00000550582 IQSEC3Q9UPP2 1182 aaPredicted RBP18.28■□□□□ 0.52
NR4A1-216ENST00000550582 SALL2Q9Y467 1007 aaPredicted RBP18.28■□□□□ 0.52
NR4A1-216ENST00000550582 C9orf78Q9NZ63 289 aaPredicted RBP18.27■□□□□ 0.52
NR4A1-216ENST00000550582 ECM2O94769 699 aaPredicted RBP18.26■□□□□ 0.51
NR4A1-216ENST00000550582 CHAF1AQ13111 956 aaPredicted RBP18.26■□□□□ 0.51
NR4A1-216ENST00000550582 CACNA1FO60840 1977 aa18.26■□□□□ 0.51
NR4A1-216ENST00000550582 ZSWIM8A7E2V4 1837 aa18.26■□□□□ 0.51
NR4A1-216ENST00000550582 SPDYE5A6NIY4 337 aa18.25■□□□□ 0.51
NR4A1-216ENST00000550582 TLR2O60603 784 aa18.25■□□□□ 0.51
NR4A1-216ENST00000550582 ZKSCAN4Q969J2 545 aaPredicted RBP18.25■□□□□ 0.51
NR4A1-216ENST00000550582 SNCAIPQ9Y6H5 919 aa18.25■□□□□ 0.51
NR4A1-216ENST00000550582 ARAP2Q8WZ64 1704 aa18.25■□□□□ 0.51
NR4A1-216ENST00000550582 BTBD19C9JJ37 291 aa18.24■□□□□ 0.51
NR4A1-216ENST00000550582 H0YGN5 161 aa18.24■□□□□ 0.51
NR4A1-216ENST00000550582 LACTBP83111 547 aaPredicted RBP18.24■□□□□ 0.51
NR4A1-216ENST00000550582 SLC4A10Q6U841 1118 aa18.24■□□□□ 0.51
NR4A1-216ENST00000550582 FBXO33Q7Z6M2 555 aa18.24■□□□□ 0.51
NR4A1-216ENST00000550582 VPS37DQ86XT2 251 aa18.24■□□□□ 0.51
NR4A1-216ENST00000550582 KAZALD1Q96I82 304 aa18.24■□□□□ 0.51
NR4A1-216ENST00000550582 SUCLG2Q96I99 432 aa18.24■□□□□ 0.51
NR4A1-216ENST00000550582 WRNIP1Q96S55 665 aa18.24■□□□□ 0.51
NR4A1-216ENST00000550582 RIPOR2Q9Y4F9 1068 aa18.24■□□□□ 0.51
NR4A1-216ENST00000550582 IRF6O14896 467 aa18.23■□□□□ 0.51
NR4A1-216ENST00000550582 WDHD1O75717 1129 aaPredicted RBP18.23■□□□□ 0.51
NR4A1-216ENST00000550582 CETPP11597 493 aa18.23■□□□□ 0.51
NR4A1-216ENST00000550582 KIF22Q14807 665 aa18.23■□□□□ 0.51
NR4A1-216ENST00000550582 ERO1BQ86YB8 467 aa18.23■□□□□ 0.51
NR4A1-216ENST00000550582 FRAT2O75474 233 aaPredicted RBP18.22■□□□□ 0.51
NR4A1-216ENST00000550582 ALDH1L1O75891 902 aa18.22■□□□□ 0.51
NR4A1-216ENST00000550582 HDLBPQ00341 1268 aaKnown RBP18.22■□□□□ 0.51
NR4A1-216ENST00000550582 SNAPC2Q13487 334 aa18.22■□□□□ 0.51
NR4A1-216ENST00000550582 NCBP3Q53F19 620 aaKnown RBP18.22■□□□□ 0.51
NR4A1-216ENST00000550582 WDR63Q8IWG1 891 aa18.22■□□□□ 0.51
NR4A1-216ENST00000550582 TEKT1Q969V4 418 aa18.22■□□□□ 0.51
NR4A1-216ENST00000550582 SPINK5Q9NQ38 1064 aaPredicted RBP18.22■□□□□ 0.51
NR4A1-216ENST00000550582 CEP290O15078 2479 aa18.22■□□□□ 0.51
NR4A1-216ENST00000550582 MROH5Q6ZUA9 1318 aa18.22■□□□□ 0.51
NR4A1-216ENST00000550582 SZT2Q5T011 3432 aa18.21■□□□□ 0.51
NR4A1-216ENST00000550582 LRRC24Q50LG9 513 aa18.21■□□□□ 0.51
NR4A1-216ENST00000550582 SRCIN1Q9C0H9 1055 aa18.21■□□□□ 0.51
NR4A1-216ENST00000550582 NBPF7P0C2Y1 421 aaPredicted RBP18.2■□□□□ 0.5
NR4A1-216ENST00000550582 CTGFP29279 349 aa18.2■□□□□ 0.5
NR4A1-216ENST00000550582 PPIL2Q13356 520 aa18.2■□□□□ 0.5
NR4A1-216ENST00000550582 MTFR1Q15390 333 aa18.2■□□□□ 0.5
NR4A1-216ENST00000550582 APOBEC3HQ6NTF7 200 aaKnown RBP18.2■□□□□ 0.5
NR4A1-216ENST00000550582 MIGA2Q7L4E1 593 aa18.2■□□□□ 0.5
NR4A1-216ENST00000550582 TBC1D22AQ8WUA7 517 aa18.2■□□□□ 0.5
NR4A1-216ENST00000550582 ZDHHC15Q96MV8 337 aa18.2■□□□□ 0.5
NR4A1-216ENST00000550582 ZCCHC17Q9NP64 241 aaKnown RBP18.2■□□□□ 0.5
NR4A1-216ENST00000550582 TMOD2Q9NZR1 351 aa18.2■□□□□ 0.5
NR4A1-216ENST00000550582 CPA4Q9UI42 421 aa18.2■□□□□ 0.5
NR4A1-216ENST00000550582 BCAMP50895 628 aa18.19■□□□□ 0.5
NR4A1-216ENST00000550582 CAVIN4Q5BKX8 364 aa18.19■□□□□ 0.5
NR4A1-216ENST00000550582 METTL24Q5JXM2 366 aa18.19■□□□□ 0.5
NR4A1-216ENST00000550582 C17orf99Q6UX52 265 aa18.19■□□□□ 0.5
NR4A1-216ENST00000550582 FAM83AQ86UY5 434 aa18.19■□□□□ 0.5
NR4A1-216ENST00000550582 BICC1Q9H694 974 aaKnown RBP18.19■□□□□ 0.5
NR4A1-216ENST00000550582 GNRH1P01148 92 aa18.18■□□□□ 0.5
NR4A1-216ENST00000550582 INPP5BP32019 993 aa18.18■□□□□ 0.5
NR4A1-216ENST00000550582 CHRDL2Q6WN34 429 aa18.18■□□□□ 0.5
NR4A1-216ENST00000550582 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.18■□□□□ 0.5
NR4A1-216ENST00000550582 SHISA4Q96DD7 197 aa18.18■□□□□ 0.5
NR4A1-216ENST00000550582 TRIOBPQ9H2D6 2365 aa18.17■□□□□ 0.5
NR4A1-216ENST00000550582 PSMC4P43686 418 aa18.17■□□□□ 0.5
NR4A1-216ENST00000550582 PRMT2P55345 433 aa18.17■□□□□ 0.5
NR4A1-216ENST00000550582 PPATQ06203 517 aa18.17■□□□□ 0.5
NR4A1-216ENST00000550582 FKBP1CQ5VVH2 108 aa18.17■□□□□ 0.5
NR4A1-216ENST00000550582 VGLL2Q8N8G2 317 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms