RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 SSH1Q8WYL5 1049 aa27.29■■□□□ 1.96
SMARCC2-210ENST00000550519 TEPSINQ96N21 525 aa27.29■■□□□ 1.96
SMARCC2-210ENST00000550519 E9PSI1 815 aa27.28■■□□□ 1.96
SMARCC2-210ENST00000550519 PDE8BO95263 885 aa27.28■■□□□ 1.96
SMARCC2-210ENST00000550519 USP44Q9H0E7 712 aa27.28■■□□□ 1.96
SMARCC2-210ENST00000550519 IQSEC3Q9UPP2 1182 aaPredicted RBP27.28■■□□□ 1.96
SMARCC2-210ENST00000550519 HDLBPQ00341 1268 aaKnown RBP27.27■■□□□ 1.96
SMARCC2-210ENST00000550519 CAVIN4Q5BKX8 364 aa27.27■■□□□ 1.96
SMARCC2-210ENST00000550519 CDAN1Q8IWY9 1227 aa27.27■■□□□ 1.96
SMARCC2-210ENST00000550519 TBC1D22AQ8WUA7 517 aa27.27■■□□□ 1.96
SMARCC2-210ENST00000550519 TESPA1A2RU30 521 aaPredicted RBP27.26■■□□□ 1.95
SMARCC2-210ENST00000550519 KLHDC4Q8TBB5 520 aa27.26■■□□□ 1.95
SMARCC2-210ENST00000550519 LAMB1P07942 1786 aa27.25■■□□□ 1.95
SMARCC2-210ENST00000550519 TCP10L2B9ZVM9 353 aa27.25■■□□□ 1.95
SMARCC2-210ENST00000550519 CHAF1AQ13111 956 aaPredicted RBP27.25■■□□□ 1.95
SMARCC2-210ENST00000550519 ARAP2Q8WZ64 1704 aa27.24■■□□□ 1.95
SMARCC2-210ENST00000550519 SLFN5Q08AF3 891 aa27.24■■□□□ 1.95
SMARCC2-210ENST00000550519 OTUD7BQ6GQQ9 843 aa27.24■■□□□ 1.95
SMARCC2-210ENST00000550519 PTPN18Q99952 460 aa27.24■■□□□ 1.95
SMARCC2-210ENST00000550519 TMEM39BQ9GZU3 492 aa27.24■■□□□ 1.95
SMARCC2-210ENST00000550519 ELP3Q9H9T3 547 aa27.24■■□□□ 1.95
SMARCC2-210ENST00000550519 KIF16BQ96L93 1317 aa27.23■■□□□ 1.95
SMARCC2-210ENST00000550519 FRAT2O75474 233 aaPredicted RBP27.23■■□□□ 1.95
SMARCC2-210ENST00000550519 TNNI2P48788 182 aa27.23■■□□□ 1.95
SMARCC2-210ENST00000550519 BCAMP50895 628 aa27.23■■□□□ 1.95
SMARCC2-210ENST00000550519 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.23■■□□□ 1.95
SMARCC2-210ENST00000550519 OPTNQ96CV9 577 aa27.23■■□□□ 1.95
SMARCC2-210ENST00000550519 MRIQ9BWK5 157 aa27.23■■□□□ 1.95
SMARCC2-210ENST00000550519 FGFR2P21802 821 aa27.22■■□□□ 1.95
SMARCC2-210ENST00000550519 CRHR2Q13324 411 aa27.22■■□□□ 1.95
SMARCC2-210ENST00000550519 OTOP1Q7RTM1 612 aa27.22■■□□□ 1.95
SMARCC2-210ENST00000550519 MS4A4AQ96JQ5 239 aa27.22■■□□□ 1.95
SMARCC2-210ENST00000550519 TRIM17Q9Y577 477 aa27.22■■□□□ 1.95
SMARCC2-210ENST00000550519 TEKT1Q969V4 418 aa27.21■■□□□ 1.95
SMARCC2-210ENST00000550519 RFX5P48382 616 aaPredicted RBP27.2■■□□□ 1.94
SMARCC2-210ENST00000550519 MAP3K9P80192 1104 aa27.2■■□□□ 1.94
SMARCC2-210ENST00000550519 PUM3Q15397 648 aaKnown RBP27.2■■□□□ 1.94
SMARCC2-210ENST00000550519 ALDH1L2Q3SY69 923 aa27.2■■□□□ 1.94
SMARCC2-210ENST00000550519 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.2■■□□□ 1.94
SMARCC2-210ENST00000550519 ZDHHC15Q96MV8 337 aa27.2■■□□□ 1.94
SMARCC2-210ENST00000550519 SUGT1Q9Y2Z0 365 aa27.2■■□□□ 1.94
SMARCC2-210ENST00000550519 IFIT1P09914 478 aaKnown RBP27.19■■□□□ 1.94
SMARCC2-210ENST00000550519 VGLL4Q14135 290 aa27.19■■□□□ 1.94
SMARCC2-210ENST00000550519 ERO1AQ96HE7 468 aa27.19■■□□□ 1.94
SMARCC2-210ENST00000550519 EYA2O00167 538 aa27.18■■□□□ 1.94
SMARCC2-210ENST00000550519 CACNB3P54284 484 aa27.18■■□□□ 1.94
SMARCC2-210ENST00000550519 APOBEC3HQ6NTF7 200 aaKnown RBP27.18■■□□□ 1.94
SMARCC2-210ENST00000550519 CNKSR2Q8WXI2 1034 aa27.18■■□□□ 1.94
SMARCC2-210ENST00000550519 OTOFQ9HC10 1997 aa27.18■■□□□ 1.94
SMARCC2-210ENST00000550519 MAST3O60307 1309 aa27.16■■□□□ 1.94
SMARCC2-210ENST00000550519 HTTP42858 3142 aa27.16■■□□□ 1.94
SMARCC2-210ENST00000550519 FKBP1CQ5VVH2 108 aa27.16■■□□□ 1.94
SMARCC2-210ENST00000550519 FAM83AQ86UY5 434 aa27.16■■□□□ 1.94
SMARCC2-210ENST00000550519 CD99L2Q8TCZ2 262 aa27.16■■□□□ 1.94
SMARCC2-210ENST00000550519 BRI3BPQ8WY22 251 aa27.16■■□□□ 1.94
SMARCC2-210ENST00000550519 CDCA7LQ96GN5 454 aa27.16■■□□□ 1.94
SMARCC2-210ENST00000550519 GTF2A2P52657 109 aa27.15■■□□□ 1.94
SMARCC2-210ENST00000550519 SP3Q02447 781 aa27.15■■□□□ 1.94
SMARCC2-210ENST00000550519 PRPF38BQ5VTL8 546 aaKnown RBP27.15■■□□□ 1.94
SMARCC2-210ENST00000550519 HHIPL2Q6UWX4 724 aa27.15■■□□□ 1.94
SMARCC2-210ENST00000550519 ATG9AQ7Z3C6 839 aa27.15■■□□□ 1.94
SMARCC2-210ENST00000550519 TRMT2AQ8IZ69 625 aaKnown RBP27.15■■□□□ 1.94
SMARCC2-210ENST00000550519 LPIN2Q92539 896 aa27.15■■□□□ 1.94
SMARCC2-210ENST00000550519 TMOD2Q9NZR1 351 aa27.15■■□□□ 1.94
SMARCC2-210ENST00000550519 CSADQ9Y600 493 aa27.15■■□□□ 1.94
SMARCC2-210ENST00000550519 SLC5A1P13866 664 aa27.14■■□□□ 1.94
SMARCC2-210ENST00000550519 SMC4Q9NTJ3 1288 aa27.14■■□□□ 1.94
SMARCC2-210ENST00000550519 PTPN22Q9Y2R2 807 aa27.14■■□□□ 1.94
SMARCC2-210ENST00000550519 WDR66Q8TBY9 1149 aa27.13■■□□□ 1.93
SMARCC2-210ENST00000550519 CCL15-CCL14A0A0B4J2E2 113 aa27.12■■□□□ 1.93
SMARCC2-210ENST00000550519 SPDYE5A6NIY4 337 aa27.12■■□□□ 1.93
SMARCC2-210ENST00000550519 CAP1Q01518 475 aa27.12■■□□□ 1.93
SMARCC2-210ENST00000550519 CCL15Q16663 113 aa27.12■■□□□ 1.93
SMARCC2-210ENST00000550519 INTS3Q68E01 1043 aaKnown RBP27.12■■□□□ 1.93
SMARCC2-210ENST00000550519 OTUD5Q96G74 571 aa27.12■■□□□ 1.93
SMARCC2-210ENST00000550519 EFCC1Q9HA90 598 aa27.12■■□□□ 1.93
SMARCC2-210ENST00000550519 FBXO3Q9UK99 471 aa27.12■■□□□ 1.93
SMARCC2-210ENST00000550519 SNCAIPQ9Y6H5 919 aa27.12■■□□□ 1.93
SMARCC2-210ENST00000550519 HOOK2Q96ED9 719 aa27.11■■□□□ 1.93
SMARCC2-210ENST00000550519 UBTFL1P0CB47 393 aaPredicted RBP27.1■■□□□ 1.93
SMARCC2-210ENST00000550519 FAM43AQ8N2R8 423 aa27.1■■□□□ 1.93
SMARCC2-210ENST00000550519 WRNIP1Q96S55 665 aa27.1■■□□□ 1.93
SMARCC2-210ENST00000550519 ZFYVE28Q9HCC9 887 aa27.1■■□□□ 1.93
SMARCC2-210ENST00000550519 RPAP1Q9BWH6 1393 aaPredicted RBP27.09■■□□□ 1.93
SMARCC2-210ENST00000550519 CIAO1O76071 339 aa27.09■■□□□ 1.93
SMARCC2-210ENST00000550519 CT47B1P0C2W7 299 aaPredicted RBP27.09■■□□□ 1.93
SMARCC2-210ENST00000550519 TAF1CQ15572 869 aaPredicted RBP27.09■■□□□ 1.93
SMARCC2-210ENST00000550519 ERO1BQ86YB8 467 aa27.09■■□□□ 1.93
SMARCC2-210ENST00000550519 ZKSCAN4Q969J2 545 aaPredicted RBP27.08■■□□□ 1.93
SMARCC2-210ENST00000550519 ARMC5Q96C12 935 aa27.08■■□□□ 1.93
SMARCC2-210ENST00000550519 DCAF15Q66K64 600 aa27.07■■□□□ 1.92
SMARCC2-210ENST00000550519 SIL1Q9H173 461 aa27.07■■□□□ 1.92
SMARCC2-210ENST00000550519 CEP126Q9P2H0 1117 aa27.07■■□□□ 1.92
SMARCC2-210ENST00000550519 NOB1Q9ULX3 412 aaKnown RBP27.07■■□□□ 1.92
SMARCC2-210ENST00000550519 DAGLAQ9Y4D2 1042 aa27.07■■□□□ 1.92
SMARCC2-210ENST00000550519 POTEFA5A3E0 1075 aa27.06■■□□□ 1.92
SMARCC2-210ENST00000550519 CETPP11597 493 aa27.06■■□□□ 1.92
SMARCC2-210ENST00000550519 ATP2B3Q16720 1220 aa27.06■■□□□ 1.92
SMARCC2-210ENST00000550519 FAM151AQ8WW52 585 aa27.06■■□□□ 1.92
SMARCC2-210ENST00000550519 IRF6O14896 467 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 277.9 ms