RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 IGF2BP3O00425 579 aaKnown RBP eCLIP13.65□□□□□ -0.22
PFDN5-210ENST00000550513 CRKP46108 304 aa13.65□□□□□ -0.22
PFDN5-210ENST00000550513 MRPL50Q8N5N7 158 aaKnown RBP13.65□□□□□ -0.22
PFDN5-210ENST00000550513 ANKRD44Q8N8A2 993 aa13.65□□□□□ -0.22
PFDN5-210ENST00000550513 TDRD3Q9H7E2 651 aaKnown RBP13.65□□□□□ -0.22
PFDN5-210ENST00000550513 ZNF70Q9UC06 446 aaPredicted RBP13.65□□□□□ -0.22
PFDN5-210ENST00000550513 IQSEC3Q9UPP2 1182 aaPredicted RBP13.65□□□□□ -0.22
PFDN5-210ENST00000550513 MGAMO43451 1857 aa13.64□□□□□ -0.23
PFDN5-210ENST00000550513 FRAT2O75474 233 aaPredicted RBP13.64□□□□□ -0.23
PFDN5-210ENST00000550513 USP2O75604 605 aaPredicted RBP13.64□□□□□ -0.23
PFDN5-210ENST00000550513 TNNI2P48788 182 aa13.64□□□□□ -0.23
PFDN5-210ENST00000550513 CHAF1AQ13111 956 aaPredicted RBP13.64□□□□□ -0.23
PFDN5-210ENST00000550513 LRRC24Q50LG9 513 aa13.64□□□□□ -0.23
PFDN5-210ENST00000550513 CAVIN4Q5BKX8 364 aa13.64□□□□□ -0.23
PFDN5-210ENST00000550513 DZIP1LQ8IYY4 767 aaKnown RBP13.64□□□□□ -0.23
PFDN5-210ENST00000550513 BRCA2P51587 3418 aa13.64□□□□□ -0.23
PFDN5-210ENST00000550513 PTPRFP10586 1907 aa13.63□□□□□ -0.23
PFDN5-210ENST00000550513 TCP10L2B9ZVM9 353 aa13.63□□□□□ -0.23
PFDN5-210ENST00000550513 E9PSI1 815 aa13.63□□□□□ -0.23
PFDN5-210ENST00000550513 GJA5P36382 358 aa13.63□□□□□ -0.23
PFDN5-210ENST00000550513 OTUD7BQ6GQQ9 843 aa13.63□□□□□ -0.23
PFDN5-210ENST00000550513 CDAN1Q8IWY9 1227 aa13.63□□□□□ -0.23
PFDN5-210ENST00000550513 VGLL2Q8N8G2 317 aa13.63□□□□□ -0.23
PFDN5-210ENST00000550513 TBC1D22AQ8WUA7 517 aa13.63□□□□□ -0.23
PFDN5-210ENST00000550513 OPTNQ96CV9 577 aa13.63□□□□□ -0.23
PFDN5-210ENST00000550513 ELP3Q9H9T3 547 aa13.63□□□□□ -0.23
PFDN5-210ENST00000550513 TRIM17Q9Y577 477 aa13.63□□□□□ -0.23
PFDN5-210ENST00000550513 MAST3O60307 1309 aa13.63□□□□□ -0.23
PFDN5-210ENST00000550513 ATAD5Q96QE3 1844 aa13.62□□□□□ -0.23
PFDN5-210ENST00000550513 DOCK1Q14185 1865 aa13.62□□□□□ -0.23
PFDN5-210ENST00000550513 PDE8BO95263 885 aa13.62□□□□□ -0.23
PFDN5-210ENST00000550513 CRHR2Q13324 411 aa13.62□□□□□ -0.23
PFDN5-210ENST00000550513 FBXO33Q7Z6M2 555 aa13.62□□□□□ -0.23
PFDN5-210ENST00000550513 KLHDC4Q8TBB5 520 aa13.62□□□□□ -0.23
PFDN5-210ENST00000550513 SSH1Q8WYL5 1049 aa13.62□□□□□ -0.23
PFDN5-210ENST00000550513 TEKT1Q969V4 418 aa13.62□□□□□ -0.23
PFDN5-210ENST00000550513 TEPSINQ96N21 525 aa13.62□□□□□ -0.23
PFDN5-210ENST00000550513 TMEM39BQ9GZU3 492 aa13.62□□□□□ -0.23
PFDN5-210ENST00000550513 KIF16BQ96L93 1317 aa13.62□□□□□ -0.23
PFDN5-210ENST00000550513 RPAP1Q9BWH6 1393 aaPredicted RBP13.61□□□□□ -0.23
PFDN5-210ENST00000550513 HDLBPQ00341 1268 aaKnown RBP13.61□□□□□ -0.23
PFDN5-210ENST00000550513 VGLL4Q14135 290 aa13.61□□□□□ -0.23
PFDN5-210ENST00000550513 PUM3Q15397 648 aaKnown RBP13.61□□□□□ -0.23
PFDN5-210ENST00000550513 GRIK5Q16478 980 aa13.61□□□□□ -0.23
PFDN5-210ENST00000550513 OTOP1Q7RTM1 612 aa13.61□□□□□ -0.23
PFDN5-210ENST00000550513 ERO1AQ96HE7 468 aa13.61□□□□□ -0.23
PFDN5-210ENST00000550513 TMOD2Q9NZR1 351 aa13.61□□□□□ -0.23
PFDN5-210ENST00000550513 TESPA1A2RU30 521 aaPredicted RBP13.6□□□□□ -0.23
PFDN5-210ENST00000550513 IFIT1P09914 478 aaKnown RBP13.6□□□□□ -0.23
PFDN5-210ENST00000550513 PRPF38BQ5VTL8 546 aaKnown RBP13.6□□□□□ -0.23
PFDN5-210ENST00000550513 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.6□□□□□ -0.23
PFDN5-210ENST00000550513 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.6□□□□□ -0.232e-11■■□□□ 12.8
PFDN5-210ENST00000550513 CD99L2Q8TCZ2 262 aa13.6□□□□□ -0.23
PFDN5-210ENST00000550513 CSADQ9Y600 493 aa13.6□□□□□ -0.23
PFDN5-210ENST00000550513 PHIPQ8WWQ0 1821 aa13.6□□□□□ -0.23
PFDN5-210ENST00000550513 MAST2Q6P0Q8 1798 aa13.59□□□□□ -0.23
PFDN5-210ENST00000550513 BCAMP50895 628 aa13.59□□□□□ -0.23
PFDN5-210ENST00000550513 CACNB3P54284 484 aa13.59□□□□□ -0.23
PFDN5-210ENST00000550513 CNKSR2Q8WXI2 1034 aa13.59□□□□□ -0.23
PFDN5-210ENST00000550513 OTUD5Q96G74 571 aa13.59□□□□□ -0.23
PFDN5-210ENST00000550513 ZDHHC15Q96MV8 337 aa13.59□□□□□ -0.23
PFDN5-210ENST00000550513 PTPN18Q99952 460 aa13.59□□□□□ -0.23
PFDN5-210ENST00000550513 USP44Q9H0E7 712 aa13.59□□□□□ -0.23
PFDN5-210ENST00000550513 SMC4Q9NTJ3 1288 aa13.59□□□□□ -0.23
PFDN5-210ENST00000550513 MKI67P46013 3256 aaKnown RBP13.59□□□□□ -0.23
PFDN5-210ENST00000550513 CCL15-CCL14A0A0B4J2E2 113 aa13.58□□□□□ -0.24
PFDN5-210ENST00000550513 SLC5A1P13866 664 aa13.58□□□□□ -0.24
PFDN5-210ENST00000550513 FGFR2P21802 821 aa13.58□□□□□ -0.24
PFDN5-210ENST00000550513 SLFN5Q08AF3 891 aa13.58□□□□□ -0.24
PFDN5-210ENST00000550513 CCL15Q16663 113 aa13.58□□□□□ -0.24
PFDN5-210ENST00000550513 ALDH1L2Q3SY69 923 aa13.58□□□□□ -0.24
PFDN5-210ENST00000550513 MS4A4AQ96JQ5 239 aa13.58□□□□□ -0.24
PFDN5-210ENST00000550513 SUGT1Q9Y2Z0 365 aa13.58□□□□□ -0.24
PFDN5-210ENST00000550513 CDK5RAP2Q96SN8 1893 aa13.57□□□□□ -0.24
PFDN5-210ENST00000550513 EYA2O00167 538 aa13.57□□□□□ -0.24
PFDN5-210ENST00000550513 GTF2A2P52657 109 aa13.57□□□□□ -0.24
PFDN5-210ENST00000550513 MAP3K9P80192 1104 aa13.57□□□□□ -0.24
PFDN5-210ENST00000550513 SP3Q02447 781 aa13.57□□□□□ -0.24
PFDN5-210ENST00000550513 TAF1CQ15572 869 aaPredicted RBP13.57□□□□□ -0.24
PFDN5-210ENST00000550513 FAM83AQ86UY5 434 aa13.57□□□□□ -0.24
PFDN5-210ENST00000550513 BRI3BPQ8WY22 251 aa13.57□□□□□ -0.24
PFDN5-210ENST00000550513 LPIN2Q92539 896 aa13.57□□□□□ -0.24
PFDN5-210ENST00000550513 HOOK2Q96ED9 719 aa13.57□□□□□ -0.24
PFDN5-210ENST00000550513 WRNIP1Q96S55 665 aa13.57□□□□□ -0.24
PFDN5-210ENST00000550513 PTPN22Q9Y2R2 807 aa13.57□□□□□ -0.24
PFDN5-210ENST00000550513 FOCADQ5VW36 1801 aa13.56□□□□□ -0.24
PFDN5-210ENST00000550513 SPDYE5A6NIY4 337 aa13.56□□□□□ -0.24
PFDN5-210ENST00000550513 RFX5P48382 616 aaPredicted RBP13.56□□□□□ -0.24
PFDN5-210ENST00000550513 INTS3Q68E01 1043 aaKnown RBP13.56□□□□□ -0.24
PFDN5-210ENST00000550513 WDR66Q8TBY9 1149 aa13.56□□□□□ -0.24
PFDN5-210ENST00000550513 EFCC1Q9HA90 598 aa13.56□□□□□ -0.24
PFDN5-210ENST00000550513 SNCAIPQ9Y6H5 919 aa13.56□□□□□ -0.24
PFDN5-210ENST00000550513 KIAA0100Q14667 2235 aaKnown RBP13.56□□□□□ -0.24
PFDN5-210ENST00000550513 UBTFL1P0CB47 393 aaPredicted RBP13.55□□□□□ -0.24
PFDN5-210ENST00000550513 FKBP1CQ5VVH2 108 aa13.55□□□□□ -0.24
PFDN5-210ENST00000550513 DCAF15Q66K64 600 aa13.55□□□□□ -0.24
PFDN5-210ENST00000550513 APOBEC3HQ6NTF7 200 aaKnown RBP13.55□□□□□ -0.24
PFDN5-210ENST00000550513 HHIPL2Q6UWX4 724 aa13.55□□□□□ -0.24
PFDN5-210ENST00000550513 CDCA7LQ96GN5 454 aa13.55□□□□□ -0.24
PFDN5-210ENST00000550513 MRIQ9BWK5 157 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms