RNA–Protein interactions for RNA: ENST00000550379.1

RNF41-208, Transcript of ring finger protein 41, human

TSL 3

Gene RNF41, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF41-208	ENST00000550379	RBM25	P49756	843 aa	Known RBP	9.26	□□□□□ -0.93
RNF41-208	ENST00000550379	TNIP1	Q15025	636 aa		9.26	□□□□□ -0.93
RNF41-208	ENST00000550379	MFSD14B	Q5SR56	506 aa		9.26	□□□□□ -0.93
RNF41-208	ENST00000550379	SLC9C2	Q5TAH2	1124 aa		9.26	□□□□□ -0.93
RNF41-208	ENST00000550379	SLC51A	Q86UW1	340 aa		9.26	□□□□□ -0.93
RNF41-208	ENST00000550379	LARGE2	Q8N3Y3	721 aa		9.26	□□□□□ -0.93
RNF41-208	ENST00000550379	MAP4K1	Q92918	833 aa		9.26	□□□□□ -0.93
RNF41-208	ENST00000550379	RILPL2	Q969X0	211 aa		9.26	□□□□□ -0.93
RNF41-208	ENST00000550379	DNAJC2	Q99543	621 aa	Known RBP	9.26	□□□□□ -0.93
RNF41-208	ENST00000550379	DIAPH3	Q9NSV4	1193 aa		9.26	□□□□□ -0.93
RNF41-208	ENST00000550379	LRP2BP	Q9P2M1	347 aa		9.26	□□□□□ -0.93
RNF41-208	ENST00000550379	SERPINA10	Q9UK55	444 aa		9.26	□□□□□ -0.93
RNF41-208	ENST00000550379	FRAT2	O75474	233 aa	Predicted RBP	9.25	□□□□□ -0.93
RNF41-208	ENST00000550379	PLCG2	P16885	1265 aa		9.25	□□□□□ -0.93
RNF41-208	ENST00000550379	YBX3	P16989	372 aa	Known RBP eCLIP	9.25	□□□□□ -0.93	3e-9	■■■■■ 29.8
RNF41-208	ENST00000550379	PRDX5	P30044	214 aa		9.25	□□□□□ -0.93
RNF41-208	ENST00000550379	PRELP	P51888	382 aa		9.25	□□□□□ -0.93
RNF41-208	ENST00000550379	ZNF280A	P59817	542 aa	Predicted RBP	9.25	□□□□□ -0.93
RNF41-208	ENST00000550379	ANAPC15	P60006	121 aa		9.25	□□□□□ -0.93
RNF41-208	ENST00000550379	GTF2I	P78347	998 aa		9.25	□□□□□ -0.93
RNF41-208	ENST00000550379	MECOM	Q03112	1051 aa		9.25	□□□□□ -0.93
RNF41-208	ENST00000550379	FKBP1C	Q5VVH2	108 aa		9.25	□□□□□ -0.93
RNF41-208	ENST00000550379	RSBN1L	Q6PCB5	846 aa	Predicted RBP	9.25	□□□□□ -0.93
RNF41-208	ENST00000550379	NIM1K	Q8IY84	436 aa		9.25	□□□□□ -0.93
RNF41-208	ENST00000550379	CERS5	Q8N5B7	392 aa		9.25	□□□□□ -0.93
RNF41-208	ENST00000550379	OSBP2	Q969R2	916 aa		9.25	□□□□□ -0.93
RNF41-208	ENST00000550379	EDC3	Q96F86	508 aa	Known RBP	9.25	□□□□□ -0.93
RNF41-208	ENST00000550379	ZDHHC15	Q96MV8	337 aa		9.25	□□□□□ -0.93
RNF41-208	ENST00000550379	RIOK1	Q9BRS2	568 aa	Known RBP	9.25	□□□□□ -0.93
RNF41-208	ENST00000550379	USP26	Q9BXU7	913 aa		9.25	□□□□□ -0.93
RNF41-208	ENST00000550379	ZNF277	Q9NRM2	450 aa	Predicted RBP	9.25	□□□□□ -0.93
RNF41-208	ENST00000550379	MYH2	Q9UKX2	1941 aa		9.25	□□□□□ -0.93
RNF41-208	ENST00000550379	IDH1	O75874	414 aa	Known RBP	9.24	□□□□□ -0.93
RNF41-208	ENST00000550379	CXCL9	Q07325	125 aa		9.24	□□□□□ -0.93
RNF41-208	ENST00000550379	NMI	Q13287	307 aa	Predicted RBP	9.24	□□□□□ -0.93
RNF41-208	ENST00000550379	CIAPIN1	Q6FI81	312 aa		9.24	□□□□□ -0.93
RNF41-208	ENST00000550379	NAA16	Q6N069	864 aa	Predicted RBP	9.24	□□□□□ -0.93
RNF41-208	ENST00000550379	ZBED3	Q96IU2	234 aa	Predicted RBP	9.24	□□□□□ -0.93
RNF41-208	ENST00000550379	STRBP	Q96SI9	672 aa	Known RBP	9.24	□□□□□ -0.93
RNF41-208	ENST00000550379	LSG1	Q9H089	658 aa	Known RBP	9.24	□□□□□ -0.93
RNF41-208	ENST00000550379	MKRN1	Q9UHC7	482 aa	Known RBP	9.24	□□□□□ -0.93
RNF41-208	ENST00000550379	CCDC171	Q6TFL3	1326 aa		9.24	□□□□□ -0.93
RNF41-208	ENST00000550379	ZNF532	Q9HCE3	1301 aa		9.24	□□□□□ -0.93
RNF41-208	ENST00000550379	COL2A1	P02458	1487 aa	Predicted RBP	9.23	□□□□□ -0.93
RNF41-208	ENST00000550379	SRCAP	Q6ZRS2	3230 aa		9.23	□□□□□ -0.93
RNF41-208	ENST00000550379		A0A0D9SFI3	127 aa		9.23	□□□□□ -0.93
RNF41-208	ENST00000550379		G3V3G9	751 aa		9.23	□□□□□ -0.93
RNF41-208	ENST00000550379	RIMBP2	O15034	1052 aa		9.23	□□□□□ -0.93
RNF41-208	ENST00000550379	BAG3	O95817	575 aa		9.23	□□□□□ -0.93
RNF41-208	ENST00000550379	PC	P11498	1178 aa	Known RBP	9.23	□□□□□ -0.93
RNF41-208	ENST00000550379	NECTIN1	Q15223	517 aa		9.23	□□□□□ -0.93
RNF41-208	ENST00000550379	DOK7	Q18PE1	504 aa		9.23	□□□□□ -0.93
RNF41-208	ENST00000550379	DCAF8	Q5TAQ9	597 aa		9.23	□□□□□ -0.93
RNF41-208	ENST00000550379	CWC27	Q6UX04	472 aa	Known RBP	9.23	□□□□□ -0.93
RNF41-208	ENST00000550379	GPC2	Q8N158	579 aa		9.23	□□□□□ -0.93
RNF41-208	ENST00000550379	L3MBTL3	Q96JM7	780 aa	Predicted RBP	9.23	□□□□□ -0.93
RNF41-208	ENST00000550379	FAM227B	Q96M60	508 aa		9.23	□□□□□ -0.93
RNF41-208	ENST00000550379	GPR101	Q96P66	508 aa	Predicted RBP	9.23	□□□□□ -0.93
RNF41-208	ENST00000550379	PUS7L	Q9H0K6	701 aa	Known RBP	9.23	□□□□□ -0.93
RNF41-208	ENST00000550379	DBNDD1	Q9H9R9	158 aa		9.23	□□□□□ -0.93
RNF41-208	ENST00000550379	ATP8A2	Q9NTI2	1148 aa		9.23	□□□□□ -0.93
RNF41-208	ENST00000550379	ABCF2	Q9UG63	623 aa		9.23	□□□□□ -0.93
RNF41-208	ENST00000550379	WWC3	Q9ULE0	1092 aa		9.23	□□□□□ -0.93
RNF41-208	ENST00000550379	MROH7-TTC4	A0A0A0MT08	1334 aa		9.23	□□□□□ -0.93
RNF41-208	ENST00000550379	PATL2	C9JE40	543 aa	Known RBP	9.22	□□□□□ -0.93
RNF41-208	ENST00000550379	PSMD14	O00487	310 aa		9.22	□□□□□ -0.93
RNF41-208	ENST00000550379	FOXP2	O15409	715 aa		9.22	□□□□□ -0.93
RNF41-208	ENST00000550379	GPAA1	O43292	621 aa		9.22	□□□□□ -0.93
RNF41-208	ENST00000550379	FGR	P09769	529 aa		9.22	□□□□□ -0.93
RNF41-208	ENST00000550379	CYP7A1	P22680	504 aa		9.22	□□□□□ -0.93
RNF41-208	ENST00000550379	HSPA4	P34932	840 aa		9.22	□□□□□ -0.93
RNF41-208	ENST00000550379	EIF6	P56537	245 aa	Known RBP	9.22	□□□□□ -0.93
RNF41-208	ENST00000550379	SBK1	Q52WX2	424 aa		9.22	□□□□□ -0.93
RNF41-208	ENST00000550379	KIAA1211	Q6ZU35	1233 aa		9.22	□□□□□ -0.93
RNF41-208	ENST00000550379	MAGEB6	Q8N7X4	407 aa		9.22	□□□□□ -0.93
RNF41-208	ENST00000550379	TEKT1	Q969V4	418 aa		9.22	□□□□□ -0.93
RNF41-208	ENST00000550379	TBC1D32	Q96NH3	1257 aa		9.22	□□□□□ -0.93
RNF41-208	ENST00000550379	IDI2	Q9BXS1	227 aa		9.22	□□□□□ -0.93
RNF41-208	ENST00000550379	IL25	Q9H293	177 aa		9.22	□□□□□ -0.93
RNF41-208	ENST00000550379	UPF2	Q9HAU5	1272 aa	Known RBP	9.22	□□□□□ -0.93
RNF41-208	ENST00000550379	RAI14	Q9P0K7	980 aa		9.22	□□□□□ -0.93
RNF41-208	ENST00000550379	CTNNA3	Q9UI47	895 aa		9.22	□□□□□ -0.93
RNF41-208	ENST00000550379	ANAPC4	Q9UJX5	808 aa		9.22	□□□□□ -0.93
RNF41-208	ENST00000550379	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	9.22	□□□□□ -0.93
RNF41-208	ENST00000550379	NDUFB9	Q9Y6M9	179 aa		9.22	□□□□□ -0.93
RNF41-208	ENST00000550379		U3KPZ7	1027 aa	Predicted RBP	9.22	□□□□□ -0.93
RNF41-208	ENST00000550379	FOCAD	Q5VW36	1801 aa		9.21	□□□□□ -0.93
RNF41-208	ENST00000550379	GOLGB1	Q14789	3259 aa	Known RBP	9.21	□□□□□ -0.93
RNF41-208	ENST00000550379	USP17L8	P0C7I0	530 aa		9.21	□□□□□ -0.94
RNF41-208	ENST00000550379	HSPD1	P10809	573 aa	Known RBP	9.21	□□□□□ -0.94
RNF41-208	ENST00000550379	RHBDL3	P58872	404 aa		9.21	□□□□□ -0.94
RNF41-208	ENST00000550379	APOBEC3H	Q6NTF7	200 aa	Known RBP	9.21	□□□□□ -0.94
RNF41-208	ENST00000550379	ARHGAP27	Q6ZUM4	889 aa		9.21	□□□□□ -0.94
RNF41-208	ENST00000550379	ZNF589	Q86UQ0	364 aa	Predicted RBP	9.21	□□□□□ -0.94
RNF41-208	ENST00000550379	DZIP1	Q86YF9	867 aa	Known RBP	9.21	□□□□□ -0.94
RNF41-208	ENST00000550379	KLHL34	Q8N239	644 aa		9.21	□□□□□ -0.94
RNF41-208	ENST00000550379	FBXL16	Q8N461	479 aa		9.21	□□□□□ -0.94
RNF41-208	ENST00000550379	OGFOD1	Q8N543	542 aa		9.21	□□□□□ -0.94
RNF41-208	ENST00000550379	MTA3	Q9BTC8	594 aa		9.21	□□□□□ -0.94
RNF41-208	ENST00000550379	TM6SF1	Q9BZW5	370 aa		9.21	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms