RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 SERPINA10Q9UK55 444 aa27.59■■■□□ 2.01
BRF1-216ENST00000550208 LDHBP07195 334 aaKnown RBP27.58■■■□□ 2.01
BRF1-216ENST00000550208 ANGEL2Q5VTE6 544 aaKnown RBP27.58■■■□□ 2.01
BRF1-216ENST00000550208 USP48Q86UV5 1035 aa27.58■■■□□ 2.01
BRF1-216ENST00000550208 DCPSQ96C86 337 aaKnown RBP27.58■■■□□ 2.01
BRF1-216ENST00000550208 GLIS2Q9BZE0 524 aaPredicted RBP27.58■■■□□ 2.01
BRF1-216ENST00000550208 POLR2AP24928 1970 aaKnown RBP27.57■■■□□ 2
BRF1-216ENST00000550208 HDLBPQ00341 1268 aaKnown RBP27.57■■■□□ 2
BRF1-216ENST00000550208 FMR1Q06787 632 aaKnown RBP eCLIP27.57■■■□□ 2
BRF1-216ENST00000550208 ZGPATQ8N5A5 531 aaKnown RBP27.57■■■□□ 2
BRF1-216ENST00000550208 GCC1Q96CN9 775 aa27.57■■■□□ 2
BRF1-216ENST00000550208 MRIQ9BWK5 157 aa27.57■■■□□ 2
BRF1-216ENST00000550208 GGA3Q9NZ52 723 aa27.57■■■□□ 2
BRF1-216ENST00000550208 SPDYE2BA6NHP3 402 aa27.56■■■□□ 2
BRF1-216ENST00000550208 SPDYE6P0CI01 402 aa27.56■■■□□ 2
BRF1-216ENST00000550208 ZAP70P43403 619 aa27.56■■■□□ 2
BRF1-216ENST00000550208 DLK2Q6UY11 383 aa27.56■■■□□ 2
BRF1-216ENST00000550208 CDC37L1Q7L3B6 337 aa27.56■■■□□ 2
BRF1-216ENST00000550208 SCAF8Q9UPN6 1271 aaKnown RBP27.56■■■□□ 2
BRF1-216ENST00000550208 AOX1Q06278 1338 aa27.56■■■□□ 2
BRF1-216ENST00000550208 TRAF5O00463 557 aa27.55■■■□□ 2
BRF1-216ENST00000550208 CENPBP07199 599 aaPredicted RBP27.55■■■□□ 2
BRF1-216ENST00000550208 ANKRD45Q5TZF3 282 aa27.55■■■□□ 2
BRF1-216ENST00000550208 SPTY2D1Q68D10 685 aaPredicted RBP27.55■■■□□ 2
BRF1-216ENST00000550208 NDUFB9Q9Y6M9 179 aa27.55■■■□□ 2
BRF1-216ENST00000550208 MAST3O60307 1309 aa27.54■■■□□ 2
BRF1-216ENST00000550208 CYP2E1P05181 493 aaPredicted RBP27.54■■■□□ 2
BRF1-216ENST00000550208 ERICH6Q7L0X2 663 aa27.54■■■□□ 2
BRF1-216ENST00000550208 KRT26Q7Z3Y9 468 aa27.54■■■□□ 2
BRF1-216ENST00000550208 TEKT1Q969V4 418 aa27.54■■■□□ 2
BRF1-216ENST00000550208 PASKQ96RG2 1323 aa27.54■■■□□ 2
BRF1-216ENST00000550208 AKAP11Q9UKA4 1901 aa27.54■■■□□ 2
BRF1-216ENST00000550208 DIXDC1Q155Q3 683 aa27.53■■■□□ 2
BRF1-216ENST00000550208 HHIPL2Q6UWX4 724 aa27.53■■■□□ 2
BRF1-216ENST00000550208 ADM5C9JUS6 153 aa27.52■■■□□ 2
BRF1-216ENST00000550208 SMC5Q8IY18 1101 aa27.52■■■□□ 2
BRF1-216ENST00000550208 ZDHHC15Q96MV8 337 aa27.52■■■□□ 2
BRF1-216ENST00000550208 TDRD3Q9H7E2 651 aaKnown RBP27.52■■■□□ 2
BRF1-216ENST00000550208 CLRN2A0PK11 232 aa27.51■■□□□ 1.99
BRF1-216ENST00000550208 HSPA6P17066 643 aa27.51■■□□□ 1.99
BRF1-216ENST00000550208 SULF1Q8IWU6 871 aa27.51■■□□□ 1.99
BRF1-216ENST00000550208 PIH1D3Q9NQM4 214 aaKnown RBP27.51■■□□□ 1.99
BRF1-216ENST00000550208 LRP2BPQ9P2M1 347 aa27.51■■□□□ 1.99
BRF1-216ENST00000550208 PITPNM2Q9BZ72 1349 aa27.5■■□□□ 1.99
BRF1-216ENST00000550208 ATP5JP18859 108 aa27.5■■□□□ 1.99
BRF1-216ENST00000550208 MECOMQ03112 1051 aa27.5■■□□□ 1.99
BRF1-216ENST00000550208 B4GALNT3Q6L9W6 998 aa27.5■■□□□ 1.99
BRF1-216ENST00000550208 APOBEC3HQ6NTF7 200 aaKnown RBP27.5■■□□□ 1.99
BRF1-216ENST00000550208 DZIP1Q86YF9 867 aaKnown RBP27.5■■□□□ 1.99
BRF1-216ENST00000550208 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.5■■□□□ 1.99
BRF1-216ENST00000550208 BOLA2Q9H3K6 86 aa27.5■■□□□ 1.99
BRF1-216ENST00000550208 ANTXR1Q9H6X2 564 aa27.5■■□□□ 1.99
BRF1-216ENST00000550208 RAI14Q9P0K7 980 aa27.5■■□□□ 1.99
BRF1-216ENST00000550208 ZNF70Q9UC06 446 aaPredicted RBP27.5■■□□□ 1.99
BRF1-216ENST00000550208 MYO1BO43795 1136 aa27.49■■□□□ 1.99
BRF1-216ENST00000550208 APLP1P51693 650 aa27.49■■□□□ 1.99
BRF1-216ENST00000550208 OTUD7AQ8TE49 926 aaPredicted RBP27.49■■□□□ 1.99
BRF1-216ENST00000550208 ZNF384Q8TF68 577 aa27.49■■□□□ 1.99
BRF1-216ENST00000550208 ZBTB47Q9UFB7 747 aaPredicted RBP27.49■■□□□ 1.99
BRF1-216ENST00000550208 DAGLAQ9Y4D2 1042 aa27.49■■□□□ 1.99
BRF1-216ENST00000550208 NSUN4Q96CB9 384 aaKnown RBP27.48■■□□□ 1.99
BRF1-216ENST00000550208 ECHDC1Q9NTX5 307 aa27.48■■□□□ 1.99
BRF1-216ENST00000550208 SPDYE2Q495Y8 402 aa27.47■■□□□ 1.99
BRF1-216ENST00000550208 VEZTQ9HBM0 779 aa27.47■■□□□ 1.99
BRF1-216ENST00000550208 PRAMEF18Q5VWM3 479 aa27.46■■□□□ 1.99
BRF1-216ENST00000550208 CST9Q5W186 159 aa27.46■■□□□ 1.99
BRF1-216ENST00000550208 FAM163AQ96GL9 167 aaPredicted RBP27.46■■□□□ 1.99
BRF1-216ENST00000550208 DNAJC2Q99543 621 aaKnown RBP27.46■■□□□ 1.99
BRF1-216ENST00000550208 HTRA3P83110 453 aa27.45■■□□□ 1.98
BRF1-216ENST00000550208 TSHZ3Q63HK5 1081 aa27.45■■□□□ 1.98
BRF1-216ENST00000550208 APOBEC3FQ8IUX4 373 aaKnown RBP27.45■■□□□ 1.98
BRF1-216ENST00000550208 SLF2Q8IX21 1173 aa27.45■■□□□ 1.98
BRF1-216ENST00000550208 GAKO14976 1311 aa27.44■■□□□ 1.98
BRF1-216ENST00000550208 GSTO1P78417 241 aa27.44■■□□□ 1.98
BRF1-216ENST00000550208 EDC3Q96F86 508 aaKnown RBP27.44■■□□□ 1.98
BRF1-216ENST00000550208 CDCA5Q96FF9 252 aa27.44■■□□□ 1.98
BRF1-216ENST00000550208 HAUS7Q99871 368 aa27.44■■□□□ 1.98
BRF1-216ENST00000550208 ZNF408Q9H9D4 720 aa27.44■■□□□ 1.98
BRF1-216ENST00000550208 MYO5AQ9Y4I1 1855 aaKnown RBP27.43■■□□□ 1.98
BRF1-216ENST00000550208 GOLIM4O00461 696 aa27.43■■□□□ 1.98
BRF1-216ENST00000550208 CELF2O95319 508 aaKnown RBP27.43■■□□□ 1.98
BRF1-216ENST00000550208 LDHCP07864 332 aa27.43■■□□□ 1.98
BRF1-216ENST00000550208 CACNB3P54284 484 aa27.43■■□□□ 1.98
BRF1-216ENST00000550208 CDC42EP5Q6NZY7 148 aa27.43■■□□□ 1.98
BRF1-216ENST00000550208 GPATCH3Q96I76 525 aa27.43■■□□□ 1.98
BRF1-216ENST00000550208 LNPKQ9C0E8 428 aa27.43■■□□□ 1.98
BRF1-216ENST00000550208 USP40Q9NVE5 1235 aa27.43■■□□□ 1.98
BRF1-216ENST00000550208 MYH2Q9UKX2 1941 aa27.43■■□□□ 1.98
BRF1-216ENST00000550208 TMEM88BA6NKF7 163 aa27.42■■□□□ 1.98
BRF1-216ENST00000550208 TCP10L2B9ZVM9 353 aa27.42■■□□□ 1.98
BRF1-216ENST00000550208 IDH1O75874 414 aaKnown RBP27.42■■□□□ 1.98
BRF1-216ENST00000550208 NUCB1Q02818 461 aa27.42■■□□□ 1.98
BRF1-216ENST00000550208 NAA16Q6N069 864 aaPredicted RBP27.42■■□□□ 1.98
BRF1-216ENST00000550208 DEFB129Q9H1M3 183 aa27.42■■□□□ 1.98
BRF1-216ENST00000550208 MROH7-TTC4A0A0A0MT08 1334 aa27.41■■□□□ 1.98
BRF1-216ENST00000550208 TTF1Q15361 905 aaPredicted RBP27.41■■□□□ 1.98
BRF1-216ENST00000550208 CHD1LQ86WJ1 897 aa27.41■■□□□ 1.98
BRF1-216ENST00000550208 PAG1Q9NWQ8 432 aa27.41■■□□□ 1.98
BRF1-216ENST00000550208 ECM29Q5VYK3 1845 aa27.41■■□□□ 1.98
BRF1-216ENST00000550208 SALL3Q9BXA9 1300 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms