RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 GATA6Q92908 595 aa8.73□□□□□ -1.01
CCDC38-208ENST00000549876 METTL22Q9BUU2 404 aaPredicted RBP8.73□□□□□ -1.01
CCDC38-208ENST00000549876 ANGEL1Q9UNK9 670 aaKnown RBP8.73□□□□□ -1.01
CCDC38-208ENST00000549876 EIF4EBP3O60516 100 aaPredicted RBP8.72□□□□□ -1.01
CCDC38-208ENST00000549876 SF3B2Q13435 895 aaKnown RBP8.72□□□□□ -1.01
CCDC38-208ENST00000549876 PHLDB3Q6NSJ2 640 aa8.72□□□□□ -1.01
CCDC38-208ENST00000549876 CBLL1Q75N03 491 aa8.72□□□□□ -1.01
CCDC38-208ENST00000549876 C1orf115Q9H7X2 142 aa8.72□□□□□ -1.01
CCDC38-208ENST00000549876 CCDC87Q9NVE4 849 aa8.72□□□□□ -1.01
CCDC38-208ENST00000549876 CTSBP07858 339 aa8.71□□□□□ -1.02
CCDC38-208ENST00000549876 ADH5P11766 374 aa8.71□□□□□ -1.02
CCDC38-208ENST00000549876 ZNF423Q2M1K9 1284 aa8.71□□□□□ -1.02
CCDC38-208ENST00000549876 VSIG10LQ86VR7 867 aa8.71□□□□□ -1.02
CCDC38-208ENST00000549876 CCNJLQ8IV13 435 aa8.71□□□□□ -1.02
CCDC38-208ENST00000549876 A0A096LPE4 126 aa8.7□□□□□ -1.02
CCDC38-208ENST00000549876 A0A1W2PPZ6 126 aa8.7□□□□□ -1.02
CCDC38-208ENST00000549876 POLR3DP05423 398 aaPredicted RBP8.7□□□□□ -1.02
CCDC38-208ENST00000549876 FKBP4Q02790 459 aaKnown RBP eCLIP8.7□□□□□ -1.02
CCDC38-208ENST00000549876 PCDH1Q08174 1060 aa8.7□□□□□ -1.02
CCDC38-208ENST00000549876 CCDC82Q8N4S0 544 aa8.7□□□□□ -1.02
CCDC38-208ENST00000549876 TBC1D32Q96NH3 1257 aa8.7□□□□□ -1.02
CCDC38-208ENST00000549876 TCF12Q99081 682 aa8.7□□□□□ -1.02
CCDC38-208ENST00000549876 A0A1W2PP55 124 aa8.69□□□□□ -1.02
CCDC38-208ENST00000549876 CYP26A1O43174 497 aa8.69□□□□□ -1.02
CCDC38-208ENST00000549876 COL19A1Q14993 1142 aa8.69□□□□□ -1.02
CCDC38-208ENST00000549876 GALNT12Q8IXK2 581 aa8.69□□□□□ -1.02
CCDC38-208ENST00000549876 FBXL18Q96ME1 805 aa8.69□□□□□ -1.02
CCDC38-208ENST00000549876 YIPF2Q9BWQ6 316 aa8.69□□□□□ -1.02
CCDC38-208ENST00000549876 CLEC4MQ9H2X3 399 aaPredicted RBP8.69□□□□□ -1.02
CCDC38-208ENST00000549876 ACTL7BQ9Y614 415 aa8.69□□□□□ -1.02
CCDC38-208ENST00000549876 FAM170BA6NMN3 283 aa8.68□□□□□ -1.02
CCDC38-208ENST00000549876 MAOBP27338 520 aa8.68□□□□□ -1.02
CCDC38-208ENST00000549876 GRIA4P48058 902 aa8.68□□□□□ -1.02
CCDC38-208ENST00000549876 SPRED3Q2MJR0 410 aa8.68□□□□□ -1.02
CCDC38-208ENST00000549876 BSDC1Q9NW68 430 aaPredicted RBP8.68□□□□□ -1.02
CCDC38-208ENST00000549876 MTMR7Q9Y216 660 aa8.67□□□□□ -1.02
CCDC38-208ENST00000549876 PPP1R15AO75807 674 aaPredicted RBP8.66□□□□□ -1.02
CCDC38-208ENST00000549876 CYP11A1P05108 521 aa8.66□□□□□ -1.02
CCDC38-208ENST00000549876 NFICP08651 508 aa8.66□□□□□ -1.02
CCDC38-208ENST00000549876 POU4F3Q15319 338 aa8.66□□□□□ -1.02
CCDC38-208ENST00000549876 TRIM56Q9BRZ2 755 aaKnown RBP8.66□□□□□ -1.02
CCDC38-208ENST00000549876 SEMA6CQ9H3T2 930 aa8.66□□□□□ -1.02
CCDC38-208ENST00000549876 GSX1Q9H4S2 264 aaPredicted RBP8.66□□□□□ -1.02
CCDC38-208ENST00000549876 ACSS3Q9H6R3 686 aa8.66□□□□□ -1.02
CCDC38-208ENST00000549876 LIN7BQ9HAP6 207 aa8.66□□□□□ -1.02
CCDC38-208ENST00000549876 ZNF211Q13398 564 aaPredicted RBP8.65□□□□□ -1.02
CCDC38-208ENST00000549876 MAP7Q14244 749 aa8.65□□□□□ -1.02
CCDC38-208ENST00000549876 TP53INP2Q8IXH6 220 aa8.65□□□□□ -1.02
CCDC38-208ENST00000549876 ANO2Q9NQ90 1003 aa8.65□□□□□ -1.02
CCDC38-208ENST00000549876 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.64□□□□□ -1.03
CCDC38-208ENST00000549876 ECEL1O95672 775 aa8.64□□□□□ -1.03
CCDC38-208ENST00000549876 ITGB5P18084 799 aa8.64□□□□□ -1.03
CCDC38-208ENST00000549876 SEZ6L2Q6UXD5 910 aa8.64□□□□□ -1.03
CCDC38-208ENST00000549876 C14orf37Q86TY3 774 aa8.64□□□□□ -1.03
CCDC38-208ENST00000549876 FAM105AQ9NUU6 356 aa8.64□□□□□ -1.03
CCDC38-208ENST00000549876 ZC3H7BQ9UGR2 993 aaKnown RBP8.64□□□□□ -1.03
CCDC38-208ENST00000549876 ARID1BQ8NFD5 2236 aaPredicted RBP8.64□□□□□ -1.03
CCDC38-208ENST00000549876 CARNS1A5YM72 827 aa8.63□□□□□ -1.03
CCDC38-208ENST00000549876 B3GALT4O96024 378 aa8.63□□□□□ -1.03
CCDC38-208ENST00000549876 ABL1P00519 1130 aa8.63□□□□□ -1.03
CCDC38-208ENST00000549876 RAB6AP20340 208 aa8.63□□□□□ -1.03
CCDC38-208ENST00000549876 FZD5Q13467 585 aa8.63□□□□□ -1.03
CCDC38-208ENST00000549876 HP1BP3Q5SSJ5 553 aaPredicted RBP8.63□□□□□ -1.03
CCDC38-208ENST00000549876 KIAA0319Q5VV43 1072 aa8.63□□□□□ -1.03
CCDC38-208ENST00000549876 OGFOD2Q6N063 350 aa8.63□□□□□ -1.03
CCDC38-208ENST00000549876 ZNF765Q7L2R6 523 aa8.63□□□□□ -1.03
CCDC38-208ENST00000549876 DYMQ7RTS9 669 aa8.63□□□□□ -1.03
CCDC38-208ENST00000549876 PAK6Q9NQU5 681 aaPredicted RBP8.63□□□□□ -1.03
CCDC38-208ENST00000549876 CYP27A1Q02318 531 aa8.62□□□□□ -1.03
CCDC38-208ENST00000549876 ECM1Q16610 540 aa8.62□□□□□ -1.03
CCDC38-208ENST00000549876 AKAP4Q5JQC9 854 aa8.62□□□□□ -1.03
CCDC38-208ENST00000549876 DUSP27Q5VZP5 1158 aa8.62□□□□□ -1.03
CCDC38-208ENST00000549876 USPL1Q5W0Q7 1092 aa8.62□□□□□ -1.03
CCDC38-208ENST00000549876 ZFYVE1Q9HBF4 777 aa8.62□□□□□ -1.03
CCDC38-208ENST00000549876 C1GALT1Q9NS00 363 aa8.62□□□□□ -1.03
CCDC38-208ENST00000549876 ITPKAP23677 461 aa8.61□□□□□ -1.03
CCDC38-208ENST00000549876 AGBL5Q8NDL9 886 aa8.61□□□□□ -1.03
CCDC38-208ENST00000549876 FLCNQ8NFG4 579 aa8.61□□□□□ -1.03
CCDC38-208ENST00000549876 ZNF576Q9H609 170 aa8.61□□□□□ -1.03
CCDC38-208ENST00000549876 SYNGAP1Q96PV0 1343 aa8.6□□□□□ -1.03
CCDC38-208ENST00000549876 JUNBP17275 347 aaPredicted RBP8.6□□□□□ -1.03
CCDC38-208ENST00000549876 ASIC4Q96FT7 647 aa8.6□□□□□ -1.03
CCDC38-208ENST00000549876 CORO1BQ9BR76 489 aa8.6□□□□□ -1.03
CCDC38-208ENST00000549876 LRRC4CQ9HCJ2 640 aa8.6□□□□□ -1.03
CCDC38-208ENST00000549876 RAD18Q9NS91 495 aa8.6□□□□□ -1.03
CCDC38-208ENST00000549876 EGFL7Q9UHF1 273 aa8.6□□□□□ -1.03
CCDC38-208ENST00000549876 DYNC1LI2O43237 492 aaPredicted RBP8.59□□□□□ -1.03
CCDC38-208ENST00000549876 ICMTO60725 284 aa8.59□□□□□ -1.03
CCDC38-208ENST00000549876 AOC2O75106 756 aa8.59□□□□□ -1.03
CCDC38-208ENST00000549876 ASPAP45381 313 aa8.59□□□□□ -1.03
CCDC38-208ENST00000549876 WFDC3Q8IUB2 231 aa8.59□□□□□ -1.03
CCDC38-208ENST00000549876 WDR18Q9BV38 432 aa8.59□□□□□ -1.03
CCDC38-208ENST00000549876 AP4E1Q9UPM8 1137 aa8.59□□□□□ -1.03
CCDC38-208ENST00000549876 OGFOD3Q6PK18 319 aa8.58□□□□□ -1.04
CCDC38-208ENST00000549876 POU5F2Q8N7G0 328 aa8.58□□□□□ -1.04
CCDC38-208ENST00000549876 DDX54Q8TDD1 881 aaKnown RBP8.58□□□□□ -1.04
CCDC38-208ENST00000549876 PTPN12Q05209 780 aaKnown RBP8.57□□□□□ -1.04
CCDC38-208ENST00000549876 BCL7CQ8WUZ0 217 aaPredicted RBP8.57□□□□□ -1.04
CCDC38-208ENST00000549876 BRPF3Q9ULD4 1205 aa8.57□□□□□ -1.04
CCDC38-208ENST00000549876 PPP1R9AQ9ULJ8 1098 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms