RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 FGFR3P22607 806 aa12.97□□□□□ -0.33
PRIM1-204ENST00000549549 ZNF157P51786 506 aaPredicted RBP12.97□□□□□ -0.33
PRIM1-204ENST00000549549 MLLT1Q03111 559 aaPredicted RBP12.97□□□□□ -0.33
PRIM1-204ENST00000549549 LRRC14Q15048 493 aa12.97□□□□□ -0.33
PRIM1-204ENST00000549549 ZNF423Q2M1K9 1284 aa12.97□□□□□ -0.33
PRIM1-204ENST00000549549 HFE2Q6ZVN8 426 aa12.97□□□□□ -0.33
PRIM1-204ENST00000549549 REC114Q7Z4M0 266 aa12.97□□□□□ -0.33
PRIM1-204ENST00000549549 ZNF837Q96EG3 531 aaPredicted RBP12.97□□□□□ -0.33
PRIM1-204ENST00000549549 ZNRF3Q9ULT6 936 aa12.97□□□□□ -0.33
PRIM1-204ENST00000549549 SMNDC1O75940 238 aaKnown RBP eCLIP12.96□□□□□ -0.33
PRIM1-204ENST00000549549 IMPDH2P12268 514 aa12.96□□□□□ -0.33
PRIM1-204ENST00000549549 MCM4P33991 863 aa12.96□□□□□ -0.33
PRIM1-204ENST00000549549 PCDH1Q08174 1060 aa12.96□□□□□ -0.33
PRIM1-204ENST00000549549 DDR2Q16832 855 aa12.96□□□□□ -0.33
PRIM1-204ENST00000549549 RNF187Q5TA31 235 aaPredicted RBP12.96□□□□□ -0.33
PRIM1-204ENST00000549549 SCARA3Q6AZY7 606 aa12.96□□□□□ -0.33
PRIM1-204ENST00000549549 KANK3Q6NY19 840 aa12.96□□□□□ -0.33
PRIM1-204ENST00000549549 FERD3LQ96RJ6 166 aa12.96□□□□□ -0.33
PRIM1-204ENST00000549549 CRBNQ96SW2 442 aa12.96□□□□□ -0.33
PRIM1-204ENST00000549549 RBSNQ9H1K0 784 aa12.96□□□□□ -0.33
PRIM1-204ENST00000549549 BRMS1Q9HCU9 246 aa12.96□□□□□ -0.33
PRIM1-204ENST00000549549 DNAJB12Q9NXW2 375 aaKnown RBP12.96□□□□□ -0.33
PRIM1-204ENST00000549549 SOX13Q9UN79 622 aa12.96□□□□□ -0.33
PRIM1-204ENST00000549549 PHF24Q9UPV7 400 aa12.96□□□□□ -0.33
PRIM1-204ENST00000549549 SOBPA7XYQ1 873 aa12.95□□□□□ -0.34
PRIM1-204ENST00000549549 ARNTP27540 789 aa12.95□□□□□ -0.34
PRIM1-204ENST00000549549 VN1R5Q7Z5H4 357 aa12.95□□□□□ -0.34
PRIM1-204ENST00000549549 ADAM19Q9H013 955 aa12.95□□□□□ -0.34
PRIM1-204ENST00000549549 EHMT1Q9H9B1 1298 aa12.95□□□□□ -0.34
PRIM1-204ENST00000549549 ATP13A2Q9NQ11 1180 aa12.95□□□□□ -0.34
PRIM1-204ENST00000549549 ACTR10Q9NZ32 417 aa12.95□□□□□ -0.34
PRIM1-204ENST00000549549 CASP7P55210 303 aa12.94□□□□□ -0.34
PRIM1-204ENST00000549549 SEPT6Q14141 434 aa12.94□□□□□ -0.34
PRIM1-204ENST00000549549 CEP135Q66GS9 1140 aa12.94□□□□□ -0.34
PRIM1-204ENST00000549549 LILRB2Q8N423 598 aa12.94□□□□□ -0.34
PRIM1-204ENST00000549549 STK35Q8TDR2 534 aa12.94□□□□□ -0.34
PRIM1-204ENST00000549549 GTPBP3Q969Y2 492 aaKnown RBP12.94□□□□□ -0.34
PRIM1-204ENST00000549549 CTBSQ01459 385 aa12.93□□□□□ -0.34
PRIM1-204ENST00000549549 CLCQ05315 142 aa12.93□□□□□ -0.34
PRIM1-204ENST00000549549 RASGRF1Q13972 1273 aa12.93□□□□□ -0.34
PRIM1-204ENST00000549549 DIEXFQ68CQ4 756 aaKnown RBP12.93□□□□□ -0.34
PRIM1-204ENST00000549549 LLGL2Q6P1M3 1020 aa12.93□□□□□ -0.34
PRIM1-204ENST00000549549 SULF2Q8IWU5 870 aa12.93□□□□□ -0.34
PRIM1-204ENST00000549549 SH3TC2Q8TF17 1288 aa12.93□□□□□ -0.34
PRIM1-204ENST00000549549 GAL3ST3Q96A11 431 aa12.93□□□□□ -0.34
PRIM1-204ENST00000549549 DNAJC7Q99615 494 aa12.93□□□□□ -0.34
PRIM1-204ENST00000549549 EMILIN2Q9BXX0 1053 aa12.93□□□□□ -0.34
PRIM1-204ENST00000549549 SIN3BO75182 1162 aa12.92□□□□□ -0.34
PRIM1-204ENST00000549549 IGBP1P78318 339 aa12.92□□□□□ -0.34
PRIM1-204ENST00000549549 ZNF252P-AS1Q0IIN9 211 aa12.92□□□□□ -0.34
PRIM1-204ENST00000549549 PKDCCQ504Y2 493 aa12.92□□□□□ -0.34
PRIM1-204ENST00000549549 ADAMTSL4Q6UY14 1074 aa12.92□□□□□ -0.34
PRIM1-204ENST00000549549 ATE1O95260 518 aa12.91□□□□□ -0.34
PRIM1-204ENST00000549549 ITGA6P23229 1130 aa12.91□□□□□ -0.34
PRIM1-204ENST00000549549 CHMP4BP1P59074 171 aa12.91□□□□□ -0.34
PRIM1-204ENST00000549549 SYT9Q86SS6 491 aa12.91□□□□□ -0.34
PRIM1-204ENST00000549549 ZCRB1Q8TBF4 217 aaKnown RBP12.91□□□□□ -0.34
PRIM1-204ENST00000549549 GRIN3AQ8TCU5 1115 aa12.91□□□□□ -0.34
PRIM1-204ENST00000549549 KANSL2Q9H9L4 492 aa12.91□□□□□ -0.34
PRIM1-204ENST00000549549 PRR12Q9ULL5 1215 aa12.91□□□□□ -0.34
PRIM1-204ENST00000549549 hCG_2014768A0A024R1R8 64 aa12.9□□□□□ -0.34
PRIM1-204ENST00000549549 CCDC85CA6NKD9 419 aa12.9□□□□□ -0.34
PRIM1-204ENST00000549549 PDPK1O15530 556 aa12.9□□□□□ -0.34
PRIM1-204ENST00000549549 PTPRAP18433 802 aa12.9□□□□□ -0.34
PRIM1-204ENST00000549549 EIF2AK2P19525 551 aaKnown RBP12.9□□□□□ -0.34
PRIM1-204ENST00000549549 IBSPP21815 317 aaPredicted RBP12.9□□□□□ -0.34
PRIM1-204ENST00000549549 ZNF468Q5VIY5 522 aaPredicted RBP12.9□□□□□ -0.34
PRIM1-204ENST00000549549 FBXW10Q5XX13 1052 aa12.9□□□□□ -0.34
PRIM1-204ENST00000549549 GK5Q6ZS86 529 aa12.9□□□□□ -0.34
PRIM1-204ENST00000549549 UBE2OQ9C0C9 1292 aaKnown RBP12.9□□□□□ -0.34
PRIM1-204ENST00000549549 TNKS2Q9H2K2 1166 aa12.9□□□□□ -0.34
PRIM1-204ENST00000549549 TMX1Q9H3N1 280 aa12.9□□□□□ -0.34
PRIM1-204ENST00000549549 IGFLR1Q9H665 355 aa12.9□□□□□ -0.34
PRIM1-204ENST00000549549 NOP58Q9Y2X3 529 aaKnown RBP12.9□□□□□ -0.34
PRIM1-204ENST00000549549 BPNT1O95861 308 aa12.89□□□□□ -0.35
PRIM1-204ENST00000549549 RPL6Q02878 288 aaKnown RBP12.89□□□□□ -0.35
PRIM1-204ENST00000549549 FXNQ16595 210 aa12.89□□□□□ -0.35
PRIM1-204ENST00000549549 LSRQ86X29 649 aaPredicted RBP12.89□□□□□ -0.35
PRIM1-204ENST00000549549 ST7Q9NRC1 585 aa12.89□□□□□ -0.35
PRIM1-204ENST00000549549 IFT57Q9NWB7 429 aa12.89□□□□□ -0.35
PRIM1-204ENST00000549549 CACNA2D2Q9NY47 1150 aa12.89□□□□□ -0.35
PRIM1-204ENST00000549549 CDC45O75419 566 aa12.88□□□□□ -0.35
PRIM1-204ENST00000549549 ESRRAP11474 423 aaPredicted RBP12.88□□□□□ -0.35
PRIM1-204ENST00000549549 PDZD3Q86UT5 571 aa12.88□□□□□ -0.35
PRIM1-204ENST00000549549 TNFRSF25Q93038 417 aa12.88□□□□□ -0.35
PRIM1-204ENST00000549549 FANCLQ9NW38 375 aa12.88□□□□□ -0.35
PRIM1-204ENST00000549549 MAPK8IP1Q9UQF2 711 aa12.88□□□□□ -0.35
PRIM1-204ENST00000549549 POLR3KQ9Y2Y1 108 aaPredicted RBP12.88□□□□□ -0.35
PRIM1-204ENST00000549549 PRKAB1Q9Y478 270 aa12.88□□□□□ -0.35
PRIM1-204ENST00000549549 PTPN11Q06124 597 aaPredicted RBP12.87□□□□□ -0.35
PRIM1-204ENST00000549549 IFRD2Q12894 506 aaPredicted RBP12.87□□□□□ -0.35
PRIM1-204ENST00000549549 C19orf47Q8N9M1 422 aaKnown RBP12.87□□□□□ -0.35
PRIM1-204ENST00000549549 APPBP2Q92624 585 aa12.87□□□□□ -0.35
PRIM1-204ENST00000549549 AVENQ9NQS1 362 aaPredicted RBP12.87□□□□□ -0.35
PRIM1-204ENST00000549549 AAASQ9NRG9 546 aa12.87□□□□□ -0.35
PRIM1-204ENST00000549549 TRIM37O94972 964 aa12.86□□□□□ -0.35
PRIM1-204ENST00000549549 FILIP1Q7Z7B0 1213 aa12.86□□□□□ -0.35
PRIM1-204ENST00000549549 KIAA0907Q7Z7F0 614 aaPredicted RBP12.86□□□□□ -0.35
PRIM1-204ENST00000549549 FAM35AQ86V20 835 aa12.86□□□□□ -0.35
PRIM1-204ENST00000549549 JMYQ8N9B5 988 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms