RNA–Protein interactions for RNA: ENST00000549347.1

RAPGEF3-220, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene RAPGEF3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-220ENST00000549347 ASTN2O75129 1339 aaPredicted RBP21.64■■□□□ 1.05
RAPGEF3-220ENST00000549347 PITPNM2Q9BZ72 1349 aa21.64■■□□□ 1.05
RAPGEF3-220ENST00000549347 LDHBP07195 334 aaKnown RBP21.64■■□□□ 1.05
RAPGEF3-220ENST00000549347 DLGAP5Q15398 846 aa21.64■■□□□ 1.05
RAPGEF3-220ENST00000549347 MRIQ9BWK5 157 aa21.64■■□□□ 1.05
RAPGEF3-220ENST00000549347 MYH2Q9UKX2 1941 aa21.64■■□□□ 1.05
RAPGEF3-220ENST00000549347 SPDYE2BA6NHP3 402 aa21.63■■□□□ 1.05
RAPGEF3-220ENST00000549347 ITGBL1O95965 494 aaPredicted RBP21.63■■□□□ 1.05
RAPGEF3-220ENST00000549347 SPDYE6P0CI01 402 aa21.63■■□□□ 1.05
RAPGEF3-220ENST00000549347 CRKP46108 304 aa21.63■■□□□ 1.05
RAPGEF3-220ENST00000549347 NBPF9Q3BBW0 867 aa21.63■■□□□ 1.05
RAPGEF3-220ENST00000549347 SMC5Q8IY18 1101 aa21.63■■□□□ 1.05
RAPGEF3-220ENST00000549347 CNTROBQ8N137 903 aa21.63■■□□□ 1.05
RAPGEF3-220ENST00000549347 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.63■■□□□ 1.05
RAPGEF3-220ENST00000549347 PASKQ96RG2 1323 aa21.62■■□□□ 1.05
RAPGEF3-220ENST00000549347 TEKT1Q969V4 418 aa21.62■■□□□ 1.05
RAPGEF3-220ENST00000549347 PCDHAC2Q9Y5I4 1007 aa21.62■■□□□ 1.05
RAPGEF3-220ENST00000549347 IGHDP01880 384 aa21.61■■□□□ 1.05
RAPGEF3-220ENST00000549347 ANGEL2Q5VTE6 544 aaKnown RBP21.61■■□□□ 1.05
RAPGEF3-220ENST00000549347 SPTY2D1Q68D10 685 aaPredicted RBP21.61■■□□□ 1.05
RAPGEF3-220ENST00000549347 ZDHHC15Q96MV8 337 aa21.61■■□□□ 1.05
RAPGEF3-220ENST00000549347 ABCF2Q9UG63 623 aa21.61■■□□□ 1.05
RAPGEF3-220ENST00000549347 ZAP70P43403 619 aa21.6■■□□□ 1.05
RAPGEF3-220ENST00000549347 HHIPL2Q6UWX4 724 aa21.6■■□□□ 1.05
RAPGEF3-220ENST00000549347 CDC37L1Q7L3B6 337 aa21.6■■□□□ 1.05
RAPGEF3-220ENST00000549347 DCPSQ96C86 337 aaKnown RBP21.6■■□□□ 1.05
RAPGEF3-220ENST00000549347 PRMT6Q96LA8 375 aaPredicted RBP21.6■■□□□ 1.05
RAPGEF3-220ENST00000549347 SNRKQ9NRH2 765 aa21.6■■□□□ 1.05
RAPGEF3-220ENST00000549347 IGSF3O75054 1194 aa21.59■■□□□ 1.05
RAPGEF3-220ENST00000549347 CYP2E1P05181 493 aaPredicted RBP21.59■■□□□ 1.05
RAPGEF3-220ENST00000549347 ATP5JP18859 108 aa21.59■■□□□ 1.05
RAPGEF3-220ENST00000549347 RBM5P52756 815 aaKnown RBP eCLIP21.59■■□□□ 1.05
RAPGEF3-220ENST00000549347 ERICH6Q7L0X2 663 aa21.59■■□□□ 1.05
RAPGEF3-220ENST00000549347 DZIP1Q86YF9 867 aaKnown RBP21.59■■□□□ 1.05
RAPGEF3-220ENST00000549347 GLIS2Q9BZE0 524 aaPredicted RBP21.59■■□□□ 1.05
RAPGEF3-220ENST00000549347 BCL11AQ9H165 835 aa21.59■■□□□ 1.05
RAPGEF3-220ENST00000549347 GAKO14976 1311 aa21.58■■□□□ 1.05
RAPGEF3-220ENST00000549347 AOX1Q06278 1338 aa21.58■■□□□ 1.05
RAPGEF3-220ENST00000549347 MYO1BO43795 1136 aa21.58■■□□□ 1.05
RAPGEF3-220ENST00000549347 DIXDC1Q155Q3 683 aa21.58■■□□□ 1.05
RAPGEF3-220ENST00000549347 TBC1D9Q6ZT07 1266 aa21.58■■□□□ 1.05
RAPGEF3-220ENST00000549347 KRT26Q7Z3Y9 468 aa21.58■■□□□ 1.05
RAPGEF3-220ENST00000549347 APOBEC3FQ8IUX4 373 aaKnown RBP21.58■■□□□ 1.05
RAPGEF3-220ENST00000549347 DAGLAQ9Y4D2 1042 aa21.58■■□□□ 1.05
RAPGEF3-220ENST00000549347 HSPA6P17066 643 aa21.57■■□□□ 1.04
RAPGEF3-220ENST00000549347 SPDYE2Q495Y8 402 aa21.57■■□□□ 1.04
RAPGEF3-220ENST00000549347 ANKRD45Q5TZF3 282 aa21.57■■□□□ 1.04
RAPGEF3-220ENST00000549347 SULF1Q8IWU6 871 aa21.57■■□□□ 1.04
RAPGEF3-220ENST00000549347 ZNF384Q8TF68 577 aa21.57■■□□□ 1.04
RAPGEF3-220ENST00000549347 GPATCH3Q96I76 525 aa21.57■■□□□ 1.04
RAPGEF3-220ENST00000549347 PIH1D3Q9NQM4 214 aaKnown RBP21.57■■□□□ 1.04
RAPGEF3-220ENST00000549347 ECHDC1Q9NTX5 307 aa21.57■■□□□ 1.04
RAPGEF3-220ENST00000549347 SALL3Q9BXA9 1300 aa21.56■■□□□ 1.04
RAPGEF3-220ENST00000549347 ADM5C9JUS6 153 aa21.56■■□□□ 1.04
RAPGEF3-220ENST00000549347 TRAF5O00463 557 aa21.56■■□□□ 1.04
RAPGEF3-220ENST00000549347 MECOMQ03112 1051 aa21.56■■□□□ 1.04
RAPGEF3-220ENST00000549347 APOBEC3HQ6NTF7 200 aaKnown RBP21.56■■□□□ 1.04
RAPGEF3-220ENST00000549347 SLF2Q8IX21 1173 aa21.56■■□□□ 1.04
RAPGEF3-220ENST00000549347 NSUN4Q96CB9 384 aaKnown RBP21.56■■□□□ 1.04
RAPGEF3-220ENST00000549347 FAM163AQ96GL9 167 aaPredicted RBP21.56■■□□□ 1.04
RAPGEF3-220ENST00000549347 LRP2BPQ9P2M1 347 aa21.56■■□□□ 1.04
RAPGEF3-220ENST00000549347 ZBTB47Q9UFB7 747 aaPredicted RBP21.56■■□□□ 1.04
RAPGEF3-220ENST00000549347 NDUFB9Q9Y6M9 179 aa21.56■■□□□ 1.04
RAPGEF3-220ENST00000549347 MYH7P12883 1935 aa21.56■■□□□ 1.04
RAPGEF3-220ENST00000549347 MROH7-TTC4A0A0A0MT08 1334 aa21.55■■□□□ 1.04
RAPGEF3-220ENST00000549347 APLP1P51693 650 aa21.55■■□□□ 1.04
RAPGEF3-220ENST00000549347 USP48Q86UV5 1035 aa21.55■■□□□ 1.04
RAPGEF3-220ENST00000549347 HAUS7Q99871 368 aa21.55■■□□□ 1.04
RAPGEF3-220ENST00000549347 TTC41PQ6P2S7 1318 aa21.55■■□□□ 1.04
RAPGEF3-220ENST00000549347 CLRN2A0PK11 232 aa21.54■■□□□ 1.04
RAPGEF3-220ENST00000549347 GSTO1P78417 241 aa21.54■■□□□ 1.04
RAPGEF3-220ENST00000549347 TTF1Q15361 905 aaPredicted RBP21.54■■□□□ 1.04
RAPGEF3-220ENST00000549347 ANTXR1Q9H6X2 564 aa21.54■■□□□ 1.04
RAPGEF3-220ENST00000549347 TDRD3Q9H7E2 651 aaKnown RBP21.54■■□□□ 1.04
RAPGEF3-220ENST00000549347 RAI14Q9P0K7 980 aa21.54■■□□□ 1.04
RAPGEF3-220ENST00000549347 ZNF70Q9UC06 446 aaPredicted RBP21.54■■□□□ 1.04
RAPGEF3-220ENST00000549347 NUCB1Q02818 461 aa21.53■■□□□ 1.04
RAPGEF3-220ENST00000549347 FMR1Q06787 632 aaKnown RBP eCLIP21.53■■□□□ 1.04
RAPGEF3-220ENST00000549347 OTUD7AQ8TE49 926 aaPredicted RBP21.53■■□□□ 1.04
RAPGEF3-220ENST00000549347 DNAJC2Q99543 621 aaKnown RBP21.53■■□□□ 1.04
RAPGEF3-220ENST00000549347 BOLA2Q9H3K6 86 aa21.53■■□□□ 1.04
RAPGEF3-220ENST00000549347 PPP2R3BQ9Y5P8 575 aa21.53■■□□□ 1.04
RAPGEF3-220ENST00000549347 RFX7Q2KHR2 1363 aa21.52■■□□□ 1.04
RAPGEF3-220ENST00000549347 MX1P20591 662 aa21.52■■□□□ 1.04
RAPGEF3-220ENST00000549347 TMED8Q6PL24 325 aaPredicted RBP21.52■■□□□ 1.04
RAPGEF3-220ENST00000549347 LNPKQ9C0E8 428 aa21.52■■□□□ 1.04
RAPGEF3-220ENST00000549347 SCAF8Q9UPN6 1271 aaKnown RBP21.52■■□□□ 1.04
RAPGEF3-220ENST00000549347 PAPPA2Q9BXP8 1791 aa21.51■■□□□ 1.03
RAPGEF3-220ENST00000549347 FOCADQ5VW36 1801 aa21.51■■□□□ 1.03
RAPGEF3-220ENST00000549347 GOLIM4O00461 696 aa21.51■■□□□ 1.03
RAPGEF3-220ENST00000549347 LDHCP07864 332 aa21.51■■□□□ 1.03
RAPGEF3-220ENST00000549347 TNFAIP1Q13829 316 aa21.51■■□□□ 1.03
RAPGEF3-220ENST00000549347 TSHZ3Q63HK5 1081 aa21.51■■□□□ 1.03
RAPGEF3-220ENST00000549347 NAA16Q6N069 864 aaPredicted RBP21.51■■□□□ 1.03
RAPGEF3-220ENST00000549347 CHD1LQ86WJ1 897 aa21.51■■□□□ 1.03
RAPGEF3-220ENST00000549347 PI4K2BQ8TCG2 481 aa21.51■■□□□ 1.03
RAPGEF3-220ENST00000549347 CDCA5Q96FF9 252 aa21.51■■□□□ 1.03
RAPGEF3-220ENST00000549347 VEZTQ9HBM0 779 aa21.51■■□□□ 1.03
RAPGEF3-220ENST00000549347 PAG1Q9NWQ8 432 aa21.51■■□□□ 1.03
RAPGEF3-220ENST00000549347 CDK5RAP2Q96SN8 1893 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms