RNA–Protein interactions for RNA: ENST00000549295.1

KRT4-202, Transcript of keratin 4, humanhuman

TSL 4

Gene KRT4, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-202ENST00000549295 DNAJC25Q9H1X3 360 aa6.33□□□□□ -1.4
KRT4-202ENST00000549295 LOC102724159A0A0B4J2E5 919 aa6.32□□□□□ -1.4
KRT4-202ENST00000549295 USP27XA6NNY8 438 aa6.32□□□□□ -1.4
KRT4-202ENST00000549295 WASLO00401 505 aaPredicted RBP6.32□□□□□ -1.4
KRT4-202ENST00000549295 POLR3GO15318 223 aaPredicted RBP6.32□□□□□ -1.4
KRT4-202ENST00000549295 C21orf2O43822 256 aa6.32□□□□□ -1.4
KRT4-202ENST00000549295 KINO60870 393 aaKnown RBP6.32□□□□□ -1.4
KRT4-202ENST00000549295 LMAN1P49257 510 aa6.32□□□□□ -1.4
KRT4-202ENST00000549295 EMP3P54852 163 aa6.32□□□□□ -1.4
KRT4-202ENST00000549295 EVCP57679 992 aa6.32□□□□□ -1.4
KRT4-202ENST00000549295 SRPK2P78362 688 aaKnown RBP6.32□□□□□ -1.4
KRT4-202ENST00000549295 ST5P78524 1137 aa6.32□□□□□ -1.4
KRT4-202ENST00000549295 FAM160A1Q05DH4 1040 aa6.32□□□□□ -1.4
KRT4-202ENST00000549295 DDR1Q08345 913 aa6.32□□□□□ -1.4
KRT4-202ENST00000549295 APOBRQ0VD83 1088 aa6.32□□□□□ -1.4
KRT4-202ENST00000549295 NECTIN1Q15223 517 aa6.32□□□□□ -1.4
KRT4-202ENST00000549295 PWP2Q15269 919 aaKnown RBP6.32□□□□□ -1.4
KRT4-202ENST00000549295 LONRF2Q1L5Z9 754 aa6.32□□□□□ -1.4
KRT4-202ENST00000549295 HSP90B2PQ58FF3 399 aa6.32□□□□□ -1.4
KRT4-202ENST00000549295 TRIM65Q6PJ69 517 aa6.32□□□□□ -1.4
KRT4-202ENST00000549295 TADA2BQ86TJ2 420 aa6.32□□□□□ -1.4
KRT4-202ENST00000549295 NUTM1Q86Y26 1132 aa6.32□□□□□ -1.4
KRT4-202ENST00000549295 CCAR1Q8IX12 1150 aaKnown RBP6.32□□□□□ -1.4
KRT4-202ENST00000549295 DHX40Q8IX18 779 aaKnown RBP6.32□□□□□ -1.4
KRT4-202ENST00000549295 MSANTD4Q8NCY6 345 aa6.32□□□□□ -1.4
KRT4-202ENST00000549295 ANKRD20A12PQ8NF67 263 aa6.32□□□□□ -1.4
KRT4-202ENST00000549295 BICD2Q8TD16 824 aa6.32□□□□□ -1.4
KRT4-202ENST00000549295 CARD10Q9BWT7 1032 aa6.32□□□□□ -1.4
KRT4-202ENST00000549295 CXorf56Q9H5V9 222 aa6.32□□□□□ -1.4
KRT4-202ENST00000549295 ST7Q9NRC1 585 aa6.32□□□□□ -1.4
KRT4-202ENST00000549295 CD163L1Q9NR16 1453 aa6.32□□□□□ -1.4
KRT4-202ENST00000549295 RREB1Q92766 1687 aa6.32□□□□□ -1.4
KRT4-202ENST00000549295 VPS37CA5D8V6 355 aaPredicted RBP6.31□□□□□ -1.4
KRT4-202ENST00000549295 STX10O60499 249 aa6.31□□□□□ -1.4
KRT4-202ENST00000549295 NR1I2O75469 434 aa6.31□□□□□ -1.4
KRT4-202ENST00000549295 MAP2K2P36507 400 aa6.31□□□□□ -1.4
KRT4-202ENST00000549295 R3HDM1Q15032 1099 aaKnown RBP6.31□□□□□ -1.4
KRT4-202ENST00000549295 EZH2Q15910 746 aaKnown RBP6.31□□□□□ -1.4
KRT4-202ENST00000549295 CAMK4Q16566 473 aa6.31□□□□□ -1.4
KRT4-202ENST00000549295 ME3Q16798 604 aa6.31□□□□□ -1.4
KRT4-202ENST00000549295 HSP90AB3PQ58FF7 597 aa6.31□□□□□ -1.4
KRT4-202ENST00000549295 CT47A1Q5JQC4 288 aaPredicted RBP6.31□□□□□ -1.4
KRT4-202ENST00000549295 TTLL5Q6EMB2 1281 aa6.31□□□□□ -1.4
KRT4-202ENST00000549295 SPNS2Q8IVW8 549 aa6.31□□□□□ -1.4
KRT4-202ENST00000549295 CCDC83Q8IWF9 413 aa6.31□□□□□ -1.4
KRT4-202ENST00000549295 CKAP2LQ8IYA6 745 aa6.31□□□□□ -1.4
KRT4-202ENST00000549295 BANK1Q8NDB2 785 aa6.31□□□□□ -1.4
KRT4-202ENST00000549295 ENGASEQ8NFI3 743 aa6.31□□□□□ -1.4
KRT4-202ENST00000549295 GPATCH3Q96I76 525 aa6.31□□□□□ -1.4
KRT4-202ENST00000549295 PGBD1Q96JS3 809 aa6.31□□□□□ -1.4
KRT4-202ENST00000549295 GGNBP2Q9H3C7 697 aa6.31□□□□□ -1.4
KRT4-202ENST00000549295 TRMT1Q9NXH9 659 aaKnown RBP6.31□□□□□ -1.4
KRT4-202ENST00000549295 RAI14Q9P0K7 980 aa6.31□□□□□ -1.4
KRT4-202ENST00000549295 USP16Q9Y5T5 823 aa6.31□□□□□ -1.4
KRT4-202ENST00000549295 MRFAP1Q9Y605 127 aa6.31□□□□□ -1.4
KRT4-202ENST00000549295 PARP3Q9Y6F1 533 aa6.31□□□□□ -1.4
KRT4-202ENST00000549295 TUBGCP6Q96RT7 1819 aa6.31□□□□□ -1.4
KRT4-202ENST00000549295 CPDO75976 1380 aa6.31□□□□□ -1.4
KRT4-202ENST00000549295 LMO7Q8WWI1 1683 aa6.3□□□□□ -1.4
KRT4-202ENST00000549295 TRIM66O15016 1216 aa6.3□□□□□ -1.4
KRT4-202ENST00000549295 SASH3O75995 380 aa6.3□□□□□ -1.4
KRT4-202ENST00000549295 URI1O94763 535 aaPredicted RBP6.3□□□□□ -1.4
KRT4-202ENST00000549295 HOXB3P14651 431 aaPredicted RBP6.3□□□□□ -1.4
KRT4-202ENST00000549295 AARSP49588 968 aaKnown RBP eCLIP6.3□□□□□ -1.4
KRT4-202ENST00000549295 PPP2R3AQ06190 1150 aa6.3□□□□□ -1.4
KRT4-202ENST00000549295 RESTQ13127 1097 aa6.3□□□□□ -1.4
KRT4-202ENST00000549295 NBPF20Q3BBV1 942 aa6.3□□□□□ -1.4
KRT4-202ENST00000549295 FOXD4L6Q3SYB3 417 aaPredicted RBP6.3□□□□□ -1.4
KRT4-202ENST00000549295 BEND6Q5SZJ8 279 aaPredicted RBP6.3□□□□□ -1.4
KRT4-202ENST00000549295 ARMCX5Q6P1M9 558 aa6.3□□□□□ -1.4
KRT4-202ENST00000549295 FOXD4L3Q6VB84 417 aaPredicted RBP6.3□□□□□ -1.4
KRT4-202ENST00000549295 GBP6Q6ZN66 633 aa6.3□□□□□ -1.4
KRT4-202ENST00000549295 SRGAP1Q7Z6B7 1085 aa6.3□□□□□ -1.4
KRT4-202ENST00000549295 PACS2Q86VP3 889 aa6.3□□□□□ -1.4
KRT4-202ENST00000549295 PI4K2BQ8TCG2 481 aa6.3□□□□□ -1.4
KRT4-202ENST00000549295 MAP4K1Q92918 833 aa6.3□□□□□ -1.4
KRT4-202ENST00000549295 RNF25Q96BH1 459 aaPredicted RBP6.3□□□□□ -1.4
KRT4-202ENST00000549295 EVI5LQ96CN4 794 aa6.3□□□□□ -1.4
KRT4-202ENST00000549295 PHACTR3Q96KR7 559 aa6.3□□□□□ -1.4
KRT4-202ENST00000549295 JAKMIP1Q96N16 626 aaKnown RBP6.3□□□□□ -1.4
KRT4-202ENST00000549295 CARD6Q9BX69 1037 aa6.3□□□□□ -1.4
KRT4-202ENST00000549295 NAA15Q9BXJ9 866 aaKnown RBP6.3□□□□□ -1.4
KRT4-202ENST00000549295 PARD6BQ9BYG5 372 aa6.3□□□□□ -1.4
KRT4-202ENST00000549295 MYO1AQ9UBC5 1043 aa6.3□□□□□ -1.4
KRT4-202ENST00000549295 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.3□□□□□ -1.4
KRT4-202ENST00000549295 L1RE1Q9UN81 338 aa6.3□□□□□ -1.4
KRT4-202ENST00000549295 IQSEC3Q9UPP2 1182 aaPredicted RBP6.3□□□□□ -1.4
KRT4-202ENST00000549295 ITSN1Q15811 1721 aa6.3□□□□□ -1.4
KRT4-202ENST00000549295 PHRF1Q9P1Y6 1649 aaKnown RBP6.29□□□□□ -1.4
KRT4-202ENST00000549295 RGPD3A6NKT7 1758 aaPredicted RBP6.29□□□□□ -1.4
KRT4-202ENST00000549295 RGPD4Q7Z3J3 1758 aa6.29□□□□□ -1.4
KRT4-202ENST00000549295 PLEKHG3A1L390 1219 aa6.29□□□□□ -1.4
KRT4-202ENST00000549295 SRRM3A6NNA2 597 aaPredicted RBP6.29□□□□□ -1.4
KRT4-202ENST00000549295 PPP1R12AO14974 1030 aaPredicted RBP6.29□□□□□ -1.4
KRT4-202ENST00000549295 NLRP12P59046 1061 aa6.29□□□□□ -1.4
KRT4-202ENST00000549295 MMRN1Q13201 1228 aa6.29□□□□□ -1.4
KRT4-202ENST00000549295 KIF4BQ2VIQ3 1234 aa6.29□□□□□ -1.4
KRT4-202ENST00000549295 MAP9Q49MG5 647 aa6.29□□□□□ -1.4
KRT4-202ENST00000549295 NUP188Q5SRE5 1749 aa6.29□□□□□ -1.4
KRT4-202ENST00000549295 FAM182BQ5T319 152 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms