RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 NOL10Q9BSC4 688 aaKnown RBP11.82□□□□□ -0.52
SMARCD1-206ENST00000549274 MRIQ9BWK5 157 aa11.82□□□□□ -0.52
SMARCD1-206ENST00000549274 WTIPA6NIX2 430 aaPredicted RBP11.81□□□□□ -0.52
SMARCD1-206ENST00000549274 MAP4K4O95819 1239 aaPredicted RBP11.81□□□□□ -0.52
SMARCD1-206ENST00000549274 MFAP1P55081 439 aaKnown RBP11.81□□□□□ -0.52
SMARCD1-206ENST00000549274 DACT2Q5SW24 774 aa11.81□□□□□ -0.52
SMARCD1-206ENST00000549274 SLC51AQ86UW1 340 aa11.81□□□□□ -0.52
SMARCD1-206ENST00000549274 RUFY2Q8WXA3 655 aa11.81□□□□□ -0.52
SMARCD1-206ENST00000549274 DPF2Q92785 391 aa11.81□□□□□ -0.52
SMARCD1-206ENST00000549274 FSD1Q9BTV5 496 aa11.81□□□□□ -0.52
SMARCD1-206ENST00000549274 ABCF2Q9UG63 623 aa11.81□□□□□ -0.52
SMARCD1-206ENST00000549274 IQSEC3Q9UPP2 1182 aaPredicted RBP11.81□□□□□ -0.52
SMARCD1-206ENST00000549274 YDJCA8MPS7 323 aa11.8□□□□□ -0.52
SMARCD1-206ENST00000549274 IDH1O75874 414 aaKnown RBP11.8□□□□□ -0.52
SMARCD1-206ENST00000549274 CYP2E1P05181 493 aaPredicted RBP11.8□□□□□ -0.52
SMARCD1-206ENST00000549274 LMOD1P29536 600 aaPredicted RBP11.8□□□□□ -0.52
SMARCD1-206ENST00000549274 CXCL9Q07325 125 aa11.8□□□□□ -0.52
SMARCD1-206ENST00000549274 SCARF1Q14162 830 aa11.8□□□□□ -0.52
SMARCD1-206ENST00000549274 RILPL2Q969X0 211 aa11.8□□□□□ -0.52
SMARCD1-206ENST00000549274 RAI14Q9P0K7 980 aa11.8□□□□□ -0.52
SMARCD1-206ENST00000549274 MYH2Q9UKX2 1941 aa11.8□□□□□ -0.52
SMARCD1-206ENST00000549274 ZNF646O15015 1829 aaPredicted RBP11.79□□□□□ -0.52
SMARCD1-206ENST00000549274 COL1A1P02452 1464 aaPredicted RBP11.79□□□□□ -0.52
SMARCD1-206ENST00000549274 H7C1D1 291 aa11.79□□□□□ -0.52
SMARCD1-206ENST00000549274 PSMD14O00487 310 aa11.79□□□□□ -0.52
SMARCD1-206ENST00000549274 RAD17O75943 681 aa11.79□□□□□ -0.52
SMARCD1-206ENST00000549274 BAG3O95817 575 aa11.79□□□□□ -0.52
SMARCD1-206ENST00000549274 PLCG2P16885 1265 aa11.79□□□□□ -0.52
SMARCD1-206ENST00000549274 UBE3CQ15386 1083 aa11.79□□□□□ -0.52
SMARCD1-206ENST00000549274 TSHZ3Q63HK5 1081 aa11.79□□□□□ -0.52
SMARCD1-206ENST00000549274 NAA16Q6N069 864 aaPredicted RBP11.79□□□□□ -0.52
SMARCD1-206ENST00000549274 SNRKQ9NRH2 765 aa11.79□□□□□ -0.52
SMARCD1-206ENST00000549274 DIAPH3Q9NSV4 1193 aa11.79□□□□□ -0.52
SMARCD1-206ENST00000549274 SERPINA10Q9UK55 444 aa11.79□□□□□ -0.52
SMARCD1-206ENST00000549274 SCN4AP35499 1836 aa11.79□□□□□ -0.52
SMARCD1-206ENST00000549274 COL4A5P29400 1685 aa11.78□□□□□ -0.52
SMARCD1-206ENST00000549274 IQCA1LA6NCM1 817 aa11.78□□□□□ -0.52
SMARCD1-206ENST00000549274 SDSP20132 328 aa11.78□□□□□ -0.52
SMARCD1-206ENST00000549274 HHIPL2Q6UWX4 724 aa11.78□□□□□ -0.52
SMARCD1-206ENST00000549274 TEKT1Q969V4 418 aa11.78□□□□□ -0.52
SMARCD1-206ENST00000549274 FAM163AQ96GL9 167 aaPredicted RBP11.78□□□□□ -0.52
SMARCD1-206ENST00000549274 TTF2Q9UNY4 1162 aaKnown RBP11.78□□□□□ -0.52
SMARCD1-206ENST00000549274 RAD50Q92878 1312 aa11.78□□□□□ -0.52
SMARCD1-206ENST00000549274 MYO5AQ9Y4I1 1855 aaKnown RBP11.77□□□□□ -0.53
SMARCD1-206ENST00000549274 GLTPD2A6NH11 291 aa11.77□□□□□ -0.53
SMARCD1-206ENST00000549274 RNF113AO15541 343 aaKnown RBP11.77□□□□□ -0.53
SMARCD1-206ENST00000549274 MYO1BO43795 1136 aa11.77□□□□□ -0.53
SMARCD1-206ENST00000549274 CDC45O75419 566 aa11.77□□□□□ -0.53
SMARCD1-206ENST00000549274 USP17L8P0C7I0 530 aa11.77□□□□□ -0.53
SMARCD1-206ENST00000549274 GSPT1P15170 499 aaKnown RBP11.77□□□□□ -0.53
SMARCD1-206ENST00000549274 ADD2P35612 726 aa11.77□□□□□ -0.53
SMARCD1-206ENST00000549274 SLC9C2Q5TAH2 1124 aa11.77□□□□□ -0.53
SMARCD1-206ENST00000549274 APPBP2Q92624 585 aa11.77□□□□□ -0.53
SMARCD1-206ENST00000549274 HELLSQ9NRZ9 838 aa11.77□□□□□ -0.53
SMARCD1-206ENST00000549274 GJA3Q9Y6H8 435 aa11.77□□□□□ -0.53
SMARCD1-206ENST00000549274 ECM29Q5VYK3 1845 aa11.76□□□□□ -0.53
SMARCD1-206ENST00000549274 UTRNP46939 3433 aa11.76□□□□□ -0.53
SMARCD1-206ENST00000549274 GNAT2P19087 354 aa11.76□□□□□ -0.53
SMARCD1-206ENST00000549274 PRDX5P30044 214 aa11.76□□□□□ -0.53
SMARCD1-206ENST00000549274 PRELPP51888 382 aa11.76□□□□□ -0.53
SMARCD1-206ENST00000549274 MECOMQ03112 1051 aa11.76□□□□□ -0.53
SMARCD1-206ENST00000549274 PI16Q6UXB8 463 aa11.76□□□□□ -0.53
SMARCD1-206ENST00000549274 MTMR14Q8NCE2 650 aa11.76□□□□□ -0.53
SMARCD1-206ENST00000549274 NSUN4Q96CB9 384 aaKnown RBP11.76□□□□□ -0.53
SMARCD1-206ENST00000549274 DDRGK1Q96HY6 314 aa11.76□□□□□ -0.53
SMARCD1-206ENST00000549274 L3MBTL3Q96JM7 780 aaPredicted RBP11.76□□□□□ -0.53
SMARCD1-206ENST00000549274 GMLQ99445 158 aa11.76□□□□□ -0.53
SMARCD1-206ENST00000549274 PIH1D3Q9NQM4 214 aaKnown RBP11.76□□□□□ -0.53
SMARCD1-206ENST00000549274 MROH7-TTC4A0A0A0MT08 1334 aa11.76□□□□□ -0.53
SMARCD1-206ENST00000549274 RPAP1Q9BWH6 1393 aaPredicted RBP11.76□□□□□ -0.53
SMARCD1-206ENST00000549274 WDR90Q96KV7 1748 aa11.75□□□□□ -0.53
SMARCD1-206ENST00000549274 PDE6AP16499 860 aa11.75□□□□□ -0.53
SMARCD1-206ENST00000549274 CYP7A1P22680 504 aa11.75□□□□□ -0.53
SMARCD1-206ENST00000549274 GMPSP49915 693 aaPredicted RBP11.75□□□□□ -0.53
SMARCD1-206ENST00000549274 ZNF280AP59817 542 aaPredicted RBP11.75□□□□□ -0.53
SMARCD1-206ENST00000549274 DLGAP5Q15398 846 aa11.75□□□□□ -0.53
SMARCD1-206ENST00000549274 KIAA0825Q8IV33 1275 aa11.75□□□□□ -0.53
SMARCD1-206ENST00000549274 MAGEB6Q8N7X4 407 aa11.75□□□□□ -0.53
SMARCD1-206ENST00000549274 AIDAQ96BJ3 306 aa11.75□□□□□ -0.53
SMARCD1-206ENST00000549274 ZDHHC15Q96MV8 337 aa11.75□□□□□ -0.53
SMARCD1-206ENST00000549274 ANTXR1Q9H6X2 564 aa11.75□□□□□ -0.53
SMARCD1-206ENST00000549274 GPRC5DQ9NZD1 345 aa11.75□□□□□ -0.53
SMARCD1-206ENST00000549274 TMOD2Q9NZR1 351 aa11.75□□□□□ -0.53
SMARCD1-206ENST00000549274 GAKO14976 1311 aa11.75□□□□□ -0.53
SMARCD1-206ENST00000549274 ZNF541Q9H0D2 1346 aa11.75□□□□□ -0.53
SMARCD1-206ENST00000549274 EPB41L2O43491 1005 aaKnown RBP11.74□□□□□ -0.53
SMARCD1-206ENST00000549274 CRKP46108 304 aa11.74□□□□□ -0.53
SMARCD1-206ENST00000549274 TBC1D9Q6ZT07 1266 aa11.74□□□□□ -0.53
SMARCD1-206ENST00000549274 PNMA8AQ86V59 439 aaPredicted RBP11.74□□□□□ -0.53
SMARCD1-206ENST00000549274 CERS5Q8N5B7 392 aa11.74□□□□□ -0.53
SMARCD1-206ENST00000549274 ADARB2Q9NS39 739 aaKnown RBP11.74□□□□□ -0.53
SMARCD1-206ENST00000549274 CNOT7Q9UIV1 285 aaKnown RBP11.74□□□□□ -0.53
SMARCD1-206ENST00000549274 HACL1Q9UJ83 578 aa11.74□□□□□ -0.53
SMARCD1-206ENST00000549274 JAG2Q9Y219 1238 aa11.74□□□□□ -0.53
SMARCD1-206ENST00000549274 RBM5P52756 815 aaKnown RBP eCLIP11.73□□□□□ -0.53
SMARCD1-206ENST00000549274 PPP4CP60510 307 aa11.73□□□□□ -0.53
SMARCD1-206ENST00000549274 TNFAIP1Q13829 316 aa11.73□□□□□ -0.53
SMARCD1-206ENST00000549274 MCMDC2Q4G0Z9 681 aa11.73□□□□□ -0.53
SMARCD1-206ENST00000549274 ZMYM1Q5SVZ6 1142 aa11.73□□□□□ -0.53
SMARCD1-206ENST00000549274 KIAA1211Q6ZU35 1233 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms