RNA–Protein interactions for RNA: ENST00000549220.5

EFCAB2-215, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-215ENST00000549220 SHANK3Q9BYB0 1731 aa7.99□□□□□ -1.13
EFCAB2-215ENST00000549220 PARP3Q9Y6F1 533 aa7.99□□□□□ -1.13
EFCAB2-215ENST00000549220 MAP3K19Q56UN5 1328 aa7.99□□□□□ -1.13
EFCAB2-215ENST00000549220 ABCC6O95255 1503 aa7.98□□□□□ -1.13
EFCAB2-215ENST00000549220 RGPD1P0DJD0 1748 aa7.98□□□□□ -1.13
EFCAB2-215ENST00000549220 CRB1P82279 1406 aa7.98□□□□□ -1.13
EFCAB2-215ENST00000549220 GTF2E1P29083 439 aaPredicted RBP7.98□□□□□ -1.13
EFCAB2-215ENST00000549220 GRIN2CQ14957 1233 aa7.98□□□□□ -1.13
EFCAB2-215ENST00000549220 FIGNL1Q6PIW4 674 aa7.98□□□□□ -1.13
EFCAB2-215ENST00000549220 MORC1Q86VD1 984 aa7.98□□□□□ -1.13
EFCAB2-215ENST00000549220 ANKRD24Q8TF21 1146 aa7.98□□□□□ -1.13
EFCAB2-215ENST00000549220 NLRP2Q9NX02 1062 aa7.98□□□□□ -1.13
EFCAB2-215ENST00000549220 NOD1Q9Y239 953 aa7.98□□□□□ -1.13
EFCAB2-215ENST00000549220 SPATA31A5Q5VU36 1347 aa7.98□□□□□ -1.13
EFCAB2-215ENST00000549220 SPATA31A7Q8IWB4 1347 aa7.98□□□□□ -1.13
EFCAB2-215ENST00000549220 HOXC9P31274 260 aa7.97□□□□□ -1.13
EFCAB2-215ENST00000549220 TNS4Q8IZW8 715 aa7.97□□□□□ -1.13
EFCAB2-215ENST00000549220 AIDAQ96BJ3 306 aa7.97□□□□□ -1.13
EFCAB2-215ENST00000549220 CDK12Q9NYV4 1490 aaPredicted RBP7.97□□□□□ -1.13
EFCAB2-215ENST00000549220 DOT1LQ8TEK3 1739 aa7.97□□□□□ -1.13
EFCAB2-215ENST00000549220 TNS1Q9HBL0 1735 aaKnown RBP7.97□□□□□ -1.13
EFCAB2-215ENST00000549220 SPATA31A1Q5TZJ5 1347 aa7.97□□□□□ -1.13
EFCAB2-215ENST00000549220 EP400Q96L91 3159 aa7.97□□□□□ -1.13
EFCAB2-215ENST00000549220 ITGB4P16144 1822 aa7.96□□□□□ -1.13
EFCAB2-215ENST00000549220 SMG6Q86US8 1419 aaKnown RBP7.96□□□□□ -1.13
EFCAB2-215ENST00000549220 DCDC2BA2VCK2 349 aa7.96□□□□□ -1.14
EFCAB2-215ENST00000549220 NEURL1BA8MQ27 555 aa7.96□□□□□ -1.14
EFCAB2-215ENST00000549220 CD33P20138 364 aa7.96□□□□□ -1.14
EFCAB2-215ENST00000549220 DDX10Q13206 875 aaKnown RBP7.96□□□□□ -1.14
EFCAB2-215ENST00000549220 USHBP1Q8N6Y0 703 aa7.96□□□□□ -1.14
EFCAB2-215ENST00000549220 WDR17Q8IZU2 1322 aa7.96□□□□□ -1.14
EFCAB2-215ENST00000549220 BLMP54132 1417 aaPredicted RBP7.95□□□□□ -1.14
EFCAB2-215ENST00000549220 NOS2P35228 1153 aa7.95□□□□□ -1.14
EFCAB2-215ENST00000549220 HSP90AB2PQ58FF8 381 aa7.95□□□□□ -1.14
EFCAB2-215ENST00000549220 TBCELQ5QJ74 424 aa7.95□□□□□ -1.14
EFCAB2-215ENST00000549220 SLC9A9Q8IVB4 645 aa7.95□□□□□ -1.14
EFCAB2-215ENST00000549220 TCP11L2Q8N4U5 519 aa7.95□□□□□ -1.14
EFCAB2-215ENST00000549220 IP6K1Q92551 441 aa7.95□□□□□ -1.14
EFCAB2-215ENST00000549220 AVENQ9NQS1 362 aaPredicted RBP7.95□□□□□ -1.14
EFCAB2-215ENST00000549220 NSD2O96028 1365 aa7.95□□□□□ -1.14
EFCAB2-215ENST00000549220 FLT4P35916 1363 aa7.95□□□□□ -1.14
EFCAB2-215ENST00000549220 BTAF1O14981 1849 aa7.94□□□□□ -1.14
EFCAB2-215ENST00000549220 DLG5Q8TDM6 1919 aa7.94□□□□□ -1.14
EFCAB2-215ENST00000549220 USP17L3A6NCW0 530 aa7.94□□□□□ -1.14
EFCAB2-215ENST00000549220 USP17L4A6NCW7 530 aa7.94□□□□□ -1.14
EFCAB2-215ENST00000549220 MSTNO14793 375 aa7.94□□□□□ -1.14
EFCAB2-215ENST00000549220 BACH1O14867 736 aa7.94□□□□□ -1.14
EFCAB2-215ENST00000549220 C21orf2O43822 256 aa7.94□□□□□ -1.14
EFCAB2-215ENST00000549220 COL9A3Q14050 684 aaPredicted RBP7.94□□□□□ -1.14
EFCAB2-215ENST00000549220 HDGFL1Q5TGJ6 251 aa7.94□□□□□ -1.14
EFCAB2-215ENST00000549220 USP17L2Q6R6M4 530 aa7.94□□□□□ -1.14
EFCAB2-215ENST00000549220 USP17L1Q7RTZ2 530 aa7.94□□□□□ -1.14
EFCAB2-215ENST00000549220 KRT27Q7Z3Y8 459 aa7.94□□□□□ -1.14
EFCAB2-215ENST00000549220 PODNQ7Z5L7 613 aa7.94□□□□□ -1.14
EFCAB2-215ENST00000549220 MKL2Q9ULH7 1088 aa7.94□□□□□ -1.14
EFCAB2-215ENST00000549220 RTL1A6NKG5 1358 aa7.94□□□□□ -1.14
EFCAB2-215ENST00000549220 PKD1L3Q7Z443 1732 aa7.93□□□□□ -1.14
EFCAB2-215ENST00000549220 ADAM23O75077 832 aa7.93□□□□□ -1.14
EFCAB2-215ENST00000549220 HIRAP54198 1017 aaPredicted RBP7.93□□□□□ -1.14
EFCAB2-215ENST00000549220 FLIIQ13045 1269 aa7.93□□□□□ -1.14
EFCAB2-215ENST00000549220 PDE3BQ13370 1112 aa7.93□□□□□ -1.14
EFCAB2-215ENST00000549220 KHNYNO15037 678 aaKnown RBP7.92□□□□□ -1.14
EFCAB2-215ENST00000549220 ATP9BO43861 1147 aa7.92□□□□□ -1.14
EFCAB2-215ENST00000549220 DDB1Q16531 1140 aa7.92□□□□□ -1.14
EFCAB2-215ENST00000549220 ARSJQ5FYB0 599 aaPredicted RBP7.92□□□□□ -1.14
EFCAB2-215ENST00000549220 ZNF468Q5VIY5 522 aaPredicted RBP7.92□□□□□ -1.14
EFCAB2-215ENST00000549220 CARD10Q9BWT7 1032 aa7.92□□□□□ -1.14
EFCAB2-215ENST00000549220 POLKQ9UBT6 870 aa7.92□□□□□ -1.14
EFCAB2-215ENST00000549220 INSRP06213 1382 aa7.92□□□□□ -1.14
EFCAB2-215ENST00000549220 M0R2N6 131 aa7.91□□□□□ -1.14
EFCAB2-215ENST00000549220 LAMC2Q13753 1193 aa7.91□□□□□ -1.14
EFCAB2-215ENST00000549220 NBPF6Q5VWK0 638 aa7.91□□□□□ -1.14
EFCAB2-215ENST00000549220 CCDC102BQ68D86 513 aa7.91□□□□□ -1.14
EFCAB2-215ENST00000549220 CHSY3Q70JA7 882 aa7.91□□□□□ -1.14
EFCAB2-215ENST00000549220 SIX5Q8N196 739 aa7.91□□□□□ -1.14
EFCAB2-215ENST00000549220 TPCN2Q8NHX9 752 aa7.91□□□□□ -1.14
EFCAB2-215ENST00000549220 TRIM11Q96F44 468 aa7.91□□□□□ -1.14
EFCAB2-215ENST00000549220 NBPF4Q96M43 638 aa7.91□□□□□ -1.14
EFCAB2-215ENST00000549220 TSPAN10Q9H1Z9 355 aaPredicted RBP7.91□□□□□ -1.14
EFCAB2-215ENST00000549220 THRAP3Q9Y2W1 955 aaKnown RBP7.91□□□□□ -1.14
EFCAB2-215ENST00000549220 MEGF6O75095 1541 aa7.91□□□□□ -1.14
EFCAB2-215ENST00000549220 NHSQ6T4R5 1651 aa7.91□□□□□ -1.14
EFCAB2-215ENST00000549220 TOGARAM1Q9Y4F4 1720 aa7.91□□□□□ -1.14
EFCAB2-215ENST00000549220 SCN11AQ9UI33 1791 aa7.9□□□□□ -1.14
EFCAB2-215ENST00000549220 IL2RBP14784 551 aa7.9□□□□□ -1.14
EFCAB2-215ENST00000549220 TATP17735 454 aaPredicted RBP7.9□□□□□ -1.14
EFCAB2-215ENST00000549220 ADH6P28332 368 aa7.9□□□□□ -1.14
EFCAB2-215ENST00000549220 MTHFSP49914 203 aa7.9□□□□□ -1.14
EFCAB2-215ENST00000549220 PCBP4P57723 403 aaKnown RBP7.9□□□□□ -1.14
EFCAB2-215ENST00000549220 EIF4A2Q14240 407 aaKnown RBP7.9□□□□□ -1.14
EFCAB2-215ENST00000549220 ALYREFQ86V81 257 aaKnown RBP7.9□□□□□ -1.14
EFCAB2-215ENST00000549220 DDX54Q8TDD1 881 aaKnown RBP7.9□□□□□ -1.14
EFCAB2-215ENST00000549220 CLUAP1Q96AJ1 413 aa7.9□□□□□ -1.14
EFCAB2-215ENST00000549220 SLC30A3Q99726 388 aa7.9□□□□□ -1.14
EFCAB2-215ENST00000549220 DISP2A7MBM2 1401 aa7.89□□□□□ -1.15
EFCAB2-215ENST00000549220 TNS2Q63HR2 1409 aa7.89□□□□□ -1.15
EFCAB2-215ENST00000549220 KIF24Q5T7B8 1368 aa7.89□□□□□ -1.15
EFCAB2-215ENST00000549220 EXOC5O00471 708 aa7.89□□□□□ -1.15
EFCAB2-215ENST00000549220 ITGB7P26010 798 aa7.89□□□□□ -1.15
EFCAB2-215ENST00000549220 SFSWAPQ12872 951 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms