RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 NBPF12Q5TAG4 269 aaPredicted RBP19.67■□□□□ 0.74
CHMP1A-206ENST00000549139 TNNQ9UQP3 1299 aa19.67■□□□□ 0.74
CHMP1A-206ENST00000549139 SPDYE2BA6NHP3 402 aa19.66■□□□□ 0.74
CHMP1A-206ENST00000549139 SNAP23O00161 211 aa19.66■□□□□ 0.74
CHMP1A-206ENST00000549139 UBTFL1P0CB47 393 aaPredicted RBP19.66■□□□□ 0.74
CHMP1A-206ENST00000549139 SPDYE6P0CI01 402 aa19.66■□□□□ 0.74
CHMP1A-206ENST00000549139 SP3Q02447 781 aa19.66■□□□□ 0.74
CHMP1A-206ENST00000549139 CHRNDQ07001 517 aa19.66■□□□□ 0.74
CHMP1A-206ENST00000549139 SUPT20HL1Q3ZLR7 823 aa19.66■□□□□ 0.74
CHMP1A-206ENST00000549139 C15orf52Q6ZUT6 534 aaKnown RBP19.66■□□□□ 0.74
CHMP1A-206ENST00000549139 ANKRD44Q8N8A2 993 aa19.66■□□□□ 0.74
CHMP1A-206ENST00000549139 CLUAP1Q96AJ1 413 aa19.66■□□□□ 0.74
CHMP1A-206ENST00000549139 PRMT6Q96LA8 375 aaPredicted RBP19.66■□□□□ 0.74
CHMP1A-206ENST00000549139 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.66■□□□□ 0.74
CHMP1A-206ENST00000549139 A0A1B0GUL6 1792 aa19.65■□□□□ 0.74
CHMP1A-206ENST00000549139 OTOFQ9HC10 1997 aa19.65■□□□□ 0.74
CHMP1A-206ENST00000549139 CLRN2A0PK11 232 aa19.65■□□□□ 0.74
CHMP1A-206ENST00000549139 CFAP100Q494V2 611 aa19.65■□□□□ 0.74
CHMP1A-206ENST00000549139 OTUD7BQ6GQQ9 843 aa19.65■□□□□ 0.74
CHMP1A-206ENST00000549139 ZNF333Q96JL9 665 aa19.65■□□□□ 0.74
CHMP1A-206ENST00000549139 RCAN3Q9UKA8 241 aa19.65■□□□□ 0.74
CHMP1A-206ENST00000549139 GNAI3P08754 354 aa19.64■□□□□ 0.73
CHMP1A-206ENST00000549139 IL1R1P14778 569 aa19.64■□□□□ 0.73
CHMP1A-206ENST00000549139 IREB2P48200 963 aaKnown RBP19.64■□□□□ 0.73
CHMP1A-206ENST00000549139 FKBP1AP62942 108 aaKnown RBP19.64■□□□□ 0.73
CHMP1A-206ENST00000549139 TAF7LQ5H9L4 462 aa19.64■□□□□ 0.73
CHMP1A-206ENST00000549139 ANKRD13AQ8IZ07 590 aa19.64■□□□□ 0.73
CHMP1A-206ENST00000549139 MS4A4AQ96JQ5 239 aa19.64■□□□□ 0.73
CHMP1A-206ENST00000549139 KCNJ4P48050 445 aa19.63■□□□□ 0.73
CHMP1A-206ENST00000549139 LDHAL6AQ6ZMR3 332 aa19.63■□□□□ 0.73
CHMP1A-206ENST00000549139 DZIP1LQ8IYY4 767 aaKnown RBP19.63■□□□□ 0.73
CHMP1A-206ENST00000549139 TMEM57Q8N5G2 664 aa19.63■□□□□ 0.73
CHMP1A-206ENST00000549139 ZNF594Q96JF6 807 aaPredicted RBP19.63■□□□□ 0.73
CHMP1A-206ENST00000549139 MEIS3Q99687 375 aa19.63■□□□□ 0.73
CHMP1A-206ENST00000549139 F8W031 263 aaPredicted RBP19.62■□□□□ 0.73
CHMP1A-206ENST00000549139 MYO1BO43795 1136 aa19.62■□□□□ 0.73
CHMP1A-206ENST00000549139 RASA3Q14644 834 aa19.62■□□□□ 0.73
CHMP1A-206ENST00000549139 COLQQ9Y215 455 aaPredicted RBP19.62■□□□□ 0.73
CHMP1A-206ENST00000549139 TAF5LO75529 589 aa19.61■□□□□ 0.73
CHMP1A-206ENST00000549139 MS4A1P11836 297 aa19.61■□□□□ 0.73
CHMP1A-206ENST00000549139 FTSJ3Q8IY81 847 aaKnown RBP19.61■□□□□ 0.73
CHMP1A-206ENST00000549139 YTHDC1Q96MU7 727 aaKnown RBP19.61■□□□□ 0.73
CHMP1A-206ENST00000549139 TMEM106CQ9BVX2 250 aa19.61■□□□□ 0.73
CHMP1A-206ENST00000549139 VEZTQ9HBM0 779 aa19.61■□□□□ 0.73
CHMP1A-206ENST00000549139 HELBQ8NG08 1087 aaPredicted RBP19.6■□□□□ 0.73
CHMP1A-206ENST00000549139 BRI3BPQ8WY22 251 aa19.6■□□□□ 0.73
CHMP1A-206ENST00000549139 OPTNQ96CV9 577 aa19.6■□□□□ 0.73
CHMP1A-206ENST00000549139 ELP3Q9H9T3 547 aa19.6■□□□□ 0.73
CHMP1A-206ENST00000549139 CNNM1Q9NRU3 951 aa19.6■□□□□ 0.73
CHMP1A-206ENST00000549139 LRRFIP2Q9Y608 721 aaKnown RBP19.6■□□□□ 0.73
CHMP1A-206ENST00000549139 PTCH2Q9Y6C5 1203 aa19.6■□□□□ 0.73
CHMP1A-206ENST00000549139 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.59■□□□□ 0.73
CHMP1A-206ENST00000549139 TEPSINQ96N21 525 aa19.59■□□□□ 0.73
CHMP1A-206ENST00000549139 RLBP1P12271 317 aa19.58■□□□□ 0.72
CHMP1A-206ENST00000549139 RFX5P48382 616 aaPredicted RBP19.58■□□□□ 0.72
CHMP1A-206ENST00000549139 SPDYE2Q495Y8 402 aa19.58■□□□□ 0.72
CHMP1A-206ENST00000549139 ZNF804AQ7Z570 1209 aa19.58■□□□□ 0.72
CHMP1A-206ENST00000549139 CDAN1Q8IWY9 1227 aa19.58■□□□□ 0.72
CHMP1A-206ENST00000549139 CNKSR2Q8WXI2 1034 aa19.58■□□□□ 0.72
CHMP1A-206ENST00000549139 PUS3Q9BZE2 481 aaKnown RBP19.58■□□□□ 0.72
CHMP1A-206ENST00000549139 JAG2Q9Y219 1238 aa19.58■□□□□ 0.72
CHMP1A-206ENST00000549139 RIPOR2Q9Y4F9 1068 aa19.58■□□□□ 0.72
CHMP1A-206ENST00000549139 SLC9C1Q4G0N8 1177 aa19.57■□□□□ 0.72
CHMP1A-206ENST00000549139 OTUD5Q96G74 571 aa19.57■□□□□ 0.72
CHMP1A-206ENST00000549139 ZNF70Q9UC06 446 aaPredicted RBP19.57■□□□□ 0.72
CHMP1A-206ENST00000549139 FAM205AQ6ZU69 1335 aa19.56■□□□□ 0.72
CHMP1A-206ENST00000549139 ZBTB7BO15156 539 aaPredicted RBP19.56■□□□□ 0.72
CHMP1A-206ENST00000549139 GNAI2P04899 355 aa19.56■□□□□ 0.72
CHMP1A-206ENST00000549139 TAF1CQ15572 869 aaPredicted RBP19.56■□□□□ 0.72
CHMP1A-206ENST00000549139 NBPF11Q86T75 865 aa19.56■□□□□ 0.72
CHMP1A-206ENST00000549139 FAM43AQ8N2R8 423 aa19.56■□□□□ 0.72
CHMP1A-206ENST00000549139 CUL9Q8IWT3 2517 aa19.56■□□□□ 0.72
CHMP1A-206ENST00000549139 MROH5Q6ZUA9 1318 aa19.55■□□□□ 0.72
CHMP1A-206ENST00000549139 RBM5P52756 815 aaKnown RBP eCLIP19.55■□□□□ 0.72
CHMP1A-206ENST00000549139 MTX1Q13505 466 aa19.55■□□□□ 0.72
CHMP1A-206ENST00000549139 TNFAIP1Q13829 316 aa19.55■□□□□ 0.72
CHMP1A-206ENST00000549139 ARHGEF6Q15052 776 aa19.55■□□□□ 0.72
CHMP1A-206ENST00000549139 ITPRIPQ8IWB1 547 aa19.55■□□□□ 0.72
CHMP1A-206ENST00000549139 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.55■□□□□ 0.722e-12■■□□□ 11.4
CHMP1A-206ENST00000549139 KLHDC4Q8TBB5 520 aa19.55■□□□□ 0.72
CHMP1A-206ENST00000549139 ZFYVE28Q9HCC9 887 aa19.55■□□□□ 0.72
CHMP1A-206ENST00000549139 FBXO3Q9UK99 471 aa19.55■□□□□ 0.72
CHMP1A-206ENST00000549139 ZSWIM8A7E2V4 1837 aa19.54■□□□□ 0.72
CHMP1A-206ENST00000549139 CCL15-CCL14A0A0B4J2E2 113 aa19.54■□□□□ 0.72
CHMP1A-206ENST00000549139 H0YGN5 161 aa19.54■□□□□ 0.72
CHMP1A-206ENST00000549139 PLIN1O60240 522 aa19.54■□□□□ 0.72
CHMP1A-206ENST00000549139 GTF2A2P52657 109 aa19.54■□□□□ 0.72
CHMP1A-206ENST00000549139 VGLL4Q14135 290 aa19.54■□□□□ 0.72
CHMP1A-206ENST00000549139 UBE4AQ14139 1066 aa19.54■□□□□ 0.72
CHMP1A-206ENST00000549139 CCL15Q16663 113 aa19.54■□□□□ 0.72
CHMP1A-206ENST00000549139 LRRC24Q50LG9 513 aa19.54■□□□□ 0.72
CHMP1A-206ENST00000549139 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.54■□□□□ 0.72
CHMP1A-206ENST00000549139 PANK1Q8TE04 598 aa19.54■□□□□ 0.72
CHMP1A-206ENST00000549139 TDRD3Q9H7E2 651 aaKnown RBP19.54■□□□□ 0.72
CHMP1A-206ENST00000549139 SERPINA10Q9UK55 444 aa19.54■□□□□ 0.72
CHMP1A-206ENST00000549139 EYA2O00167 538 aa19.53■□□□□ 0.72
CHMP1A-206ENST00000549139 SLC4A8Q2Y0W8 1093 aa19.53■□□□□ 0.72
CHMP1A-206ENST00000549139 TDRD7Q8NHU6 1098 aaKnown RBP19.53■□□□□ 0.72
CHMP1A-206ENST00000549139 ARHGAP39Q9C0H5 1083 aa19.53■□□□□ 0.72
CHMP1A-206ENST00000549139 ARAP2Q8WZ64 1704 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms