RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 CC2D1AQ6P1N0 951 aaPredicted RBP26.66■■□□□ 1.86
NPAS3-206ENST00000548645 PPP2R2CQ9Y2T4 447 aa26.66■■□□□ 1.86
NPAS3-206ENST00000548645 VWA3AA6NCI4 1184 aa26.65■■□□□ 1.86
NPAS3-206ENST00000548645 CPLX1O14810 134 aa26.65■■□□□ 1.86
NPAS3-206ENST00000548645 TBC1D8O95759 1140 aa26.65■■□□□ 1.86
NPAS3-206ENST00000548645 SLC39A14Q15043 492 aa26.65■■□□□ 1.86
NPAS3-206ENST00000548645 CASQ1P31415 396 aa26.65■■□□□ 1.86
NPAS3-206ENST00000548645 KIF23Q02241 960 aaPredicted RBP26.65■■□□□ 1.86
NPAS3-206ENST00000548645 SLC39A6Q13433 755 aa26.65■■□□□ 1.86
NPAS3-206ENST00000548645 GPHNQ9NQX3 736 aaPredicted RBP26.65■■□□□ 1.86
NPAS3-206ENST00000548645 A0A087WZG4 1122 aa26.64■■□□□ 1.86
NPAS3-206ENST00000548645 TTLL5Q6EMB2 1281 aa26.64■■□□□ 1.86
NPAS3-206ENST00000548645 OLFM4Q6UX06 510 aa26.64■■□□□ 1.86
NPAS3-206ENST00000548645 MROH7-TTC4A0A0A0MT08 1334 aa26.64■■□□□ 1.86
NPAS3-206ENST00000548645 KLF18A0A0U1RQI7 1052 aa26.64■■□□□ 1.85
NPAS3-206ENST00000548645 GOLGA8BA8MQT2 603 aa26.64■■□□□ 1.85
NPAS3-206ENST00000548645 WDHD1O75717 1129 aaPredicted RBP26.64■■□□□ 1.85
NPAS3-206ENST00000548645 ANKRD24Q8TF21 1146 aa26.64■■□□□ 1.85
NPAS3-206ENST00000548645 GPR108Q9NPR9 543 aa26.64■■□□□ 1.85
NPAS3-206ENST00000548645 FER1L4A9Z1Z3 1794 aa26.64■■□□□ 1.85
NPAS3-206ENST00000548645 KIF28PB7ZC32 967 aa26.63■■□□□ 1.85
NPAS3-206ENST00000548645 OAS2P29728 719 aaKnown RBP26.63■■□□□ 1.85
NPAS3-206ENST00000548645 MAP3K9P80192 1104 aa26.63■■□□□ 1.85
NPAS3-206ENST00000548645 NEK11Q8NG66 645 aa26.63■■□□□ 1.85
NPAS3-206ENST00000548645 MUM1L1Q5H9M0 696 aa26.63■■□□□ 1.85
NPAS3-206ENST00000548645 JMYQ8N9B5 988 aa26.63■■□□□ 1.85
NPAS3-206ENST00000548645 ARFGAP3Q9NP61 516 aa26.63■■□□□ 1.85
NPAS3-206ENST00000548645 SMC1AQ14683 1233 aaKnown RBP26.62■■□□□ 1.85
NPAS3-206ENST00000548645 LMTK3Q96Q04 1460 aa26.62■■□□□ 1.85
NPAS3-206ENST00000548645 SASH3O75995 380 aa26.62■■□□□ 1.85
NPAS3-206ENST00000548645 MARCKSP29966 332 aaPredicted RBP26.62■■□□□ 1.85
NPAS3-206ENST00000548645 GNG11P61952 73 aa26.62■■□□□ 1.85
NPAS3-206ENST00000548645 LMBR1LQ6UX01 489 aa26.62■■□□□ 1.85
NPAS3-206ENST00000548645 FAM177A1Q8N128 213 aaPredicted RBP26.62■■□□□ 1.85
NPAS3-206ENST00000548645 RGS22Q8NE09 1264 aa26.62■■□□□ 1.85
NPAS3-206ENST00000548645 TMEM139Q8IV31 216 aa26.62■■□□□ 1.85
NPAS3-206ENST00000548645 HPSEQ9Y251 543 aa26.62■■□□□ 1.85
NPAS3-206ENST00000548645 PRC1O43663 620 aa26.61■■□□□ 1.85
NPAS3-206ENST00000548645 PPP2R3AQ06190 1150 aa26.61■■□□□ 1.85
NPAS3-206ENST00000548645 IMMTQ16891 758 aaKnown RBP26.61■■□□□ 1.85
NPAS3-206ENST00000548645 HPS5Q9UPZ3 1129 aa26.61■■□□□ 1.85
NPAS3-206ENST00000548645 IFIT1P09914 478 aaKnown RBP26.61■■□□□ 1.85
NPAS3-206ENST00000548645 GNL2Q13823 731 aaKnown RBP26.61■■□□□ 1.85
NPAS3-206ENST00000548645 ARHGEF25Q86VW2 580 aa26.61■■□□□ 1.85
NPAS3-206ENST00000548645 SMARCE1Q969G3 411 aa26.61■■□□□ 1.85
NPAS3-206ENST00000548645 PPP6R2O75170 966 aa26.6■■□□□ 1.85
NPAS3-206ENST00000548645 RAD51AP2Q09MP3 1159 aa26.6■■□□□ 1.85
NPAS3-206ENST00000548645 BAG1Q99933 345 aaPredicted RBP26.6■■□□□ 1.85
NPAS3-206ENST00000548645 GJB4Q9NTQ9 266 aa26.6■■□□□ 1.85
NPAS3-206ENST00000548645 TMEM232C9JQI7 657 aa26.6■■□□□ 1.85
NPAS3-206ENST00000548645 M0R2C6 588 aa26.6■■□□□ 1.85
NPAS3-206ENST00000548645 TIMM10P62072 90 aa26.6■■□□□ 1.85
NPAS3-206ENST00000548645 GOLGA8FQ08AF8 430 aa26.6■■□□□ 1.85
NPAS3-206ENST00000548645 GOLGA8DPQ0D2H9 430 aa26.6■■□□□ 1.85
NPAS3-206ENST00000548645 THEMISQ8N1K5 641 aaPredicted RBP26.6■■□□□ 1.85
NPAS3-206ENST00000548645 RABGGTAQ92696 567 aa26.6■■□□□ 1.85
NPAS3-206ENST00000548645 FANCLQ9NW38 375 aa26.6■■□□□ 1.85
NPAS3-206ENST00000548645 MRFAP1Q9Y605 127 aa26.6■■□□□ 1.85
NPAS3-206ENST00000548645 ST5P78524 1137 aa26.59■■□□□ 1.85
NPAS3-206ENST00000548645 RSRC2Q7L4I2 434 aaKnown RBP26.59■■□□□ 1.85
NPAS3-206ENST00000548645 SLC52A2Q9HAB3 445 aa26.59■■□□□ 1.85
NPAS3-206ENST00000548645 C5P01031 1676 aa26.59■■□□□ 1.85
NPAS3-206ENST00000548645 ATP5J2-PTCD1G3V325 749 aa26.59■■□□□ 1.85
NPAS3-206ENST00000548645 PTCD1O75127 700 aaKnown RBP26.59■■□□□ 1.85
NPAS3-206ENST00000548645 PNOCQ13519 176 aa26.59■■□□□ 1.85
NPAS3-206ENST00000548645 ATG9AQ7Z3C6 839 aa26.59■■□□□ 1.85
NPAS3-206ENST00000548645 LRP10Q7Z4F1 713 aa26.59■■□□□ 1.85
NPAS3-206ENST00000548645 TRERF1Q96PN7 1200 aa26.59■■□□□ 1.85
NPAS3-206ENST00000548645 EPC1Q9H2F5 836 aa26.59■■□□□ 1.85
NPAS3-206ENST00000548645 ADAMTS7Q9UKP4 1686 aa26.59■■□□□ 1.85
NPAS3-206ENST00000548645 STX10O60499 249 aa26.59■■□□□ 1.85
NPAS3-206ENST00000548645 CASP7P55210 303 aa26.59■■□□□ 1.85
NPAS3-206ENST00000548645 JAKMIP3Q5VZ66 844 aa26.58■■□□□ 1.85
NPAS3-206ENST00000548645 WDR24Q96S15 920 aa26.58■■□□□ 1.85
NPAS3-206ENST00000548645 ZCCHC17Q9NP64 241 aaKnown RBP26.58■■□□□ 1.85
NPAS3-206ENST00000548645 FAM237AA0A1B0GTK4 181 aa26.58■■□□□ 1.85
NPAS3-206ENST00000548645 GCP02774 474 aa26.58■■□□□ 1.85
NPAS3-206ENST00000548645 C19orf44Q9H6X5 657 aa26.58■■□□□ 1.85
NPAS3-206ENST00000548645 IL15P40933 162 aaPredicted RBP26.57■■□□□ 1.84
NPAS3-206ENST00000548645 SHC4Q6S5L8 630 aa26.57■■□□□ 1.84
NPAS3-206ENST00000548645 KRBA2Q6ZNG9 492 aa26.57■■□□□ 1.84
NPAS3-206ENST00000548645 MB21D2Q8IYB1 491 aaPredicted RBP26.57■■□□□ 1.84
NPAS3-206ENST00000548645 PARD6BQ9BYG5 372 aa26.57■■□□□ 1.84
NPAS3-206ENST00000548645 AFDNP55196 1824 aaKnown RBP26.57■■□□□ 1.84
NPAS3-206ENST00000548645 VGLL3A8MV65 326 aa26.57■■□□□ 1.84
NPAS3-206ENST00000548645 HAND2P61296 217 aa26.57■■□□□ 1.84
NPAS3-206ENST00000548645 TBX2Q13207 712 aaPredicted RBP26.57■■□□□ 1.84
NPAS3-206ENST00000548645 GOLGA1Q92805 767 aa26.57■■□□□ 1.84
NPAS3-206ENST00000548645 OSBP2Q969R2 916 aa26.57■■□□□ 1.84
NPAS3-206ENST00000548645 CCDC34Q96HJ3 373 aa26.56■■□□□ 1.84
NPAS3-206ENST00000548645 ZNF496Q96IT1 587 aaPredicted RBP26.56■■□□□ 1.84
NPAS3-206ENST00000548645 AK7Q96M32 723 aa26.56■■□□□ 1.84
NPAS3-206ENST00000548645 RALYLQ86SE5 291 aaKnown RBP26.56■■□□□ 1.84
NPAS3-206ENST00000548645 NCOA7Q8NI08 942 aa26.56■■□□□ 1.84
NPAS3-206ENST00000548645 FEZ2Q9UHY8 353 aaPredicted RBP26.56■■□□□ 1.84
NPAS3-206ENST00000548645 SNRPA1P09661 255 aaKnown RBP26.55■■□□□ 1.84
NPAS3-206ENST00000548645 CCDC102BQ68D86 513 aa26.55■■□□□ 1.84
NPAS3-206ENST00000548645 PDILTQ8N807 584 aa26.55■■□□□ 1.84
NPAS3-206ENST00000548645 RESP18Q5W5W9 173 aa26.55■■□□□ 1.84
NPAS3-206ENST00000548645 FUT8Q9BYC5 575 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms