RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 UBE4AQ14139 1066 aa20.83■□□□□ 0.93
SSH1-208ENST00000548522 DZIP1LQ8IYY4 767 aaKnown RBP20.83■□□□□ 0.93
SSH1-208ENST00000548522 TESPA1A2RU30 521 aaPredicted RBP20.82■□□□□ 0.92
SSH1-208ENST00000548522 UNCXA6NJT0 531 aa20.82■□□□□ 0.92
SSH1-208ENST00000548522 ALDH1L1O75891 902 aa20.82■□□□□ 0.92
SSH1-208ENST00000548522 CRKP46108 304 aa20.82■□□□□ 0.92
SSH1-208ENST00000548522 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.82■□□□□ 0.92
SSH1-208ENST00000548522 MS4A4AQ96JQ5 239 aa20.82■□□□□ 0.92
SSH1-208ENST00000548522 SRCIN1Q9C0H9 1055 aa20.82■□□□□ 0.92
SSH1-208ENST00000548522 PCDH10Q9P2E7 1040 aa20.82■□□□□ 0.92
SSH1-208ENST00000548522 PTPN22Q9Y2R2 807 aa20.82■□□□□ 0.92
SSH1-208ENST00000548522 CACNB3P54284 484 aa20.81■□□□□ 0.92
SSH1-208ENST00000548522 TNFAIP1Q13829 316 aa20.81■□□□□ 0.92
SSH1-208ENST00000548522 VGLL4Q14135 290 aa20.81■□□□□ 0.92
SSH1-208ENST00000548522 DIEXFQ68CQ4 756 aaKnown RBP20.81■□□□□ 0.92
SSH1-208ENST00000548522 BRI3BPQ8WY22 251 aa20.81■□□□□ 0.92
SSH1-208ENST00000548522 ERO1AQ96HE7 468 aa20.81■□□□□ 0.92
SSH1-208ENST00000548522 BICC1Q9H694 974 aaKnown RBP20.81■□□□□ 0.92
SSH1-208ENST00000548522 RIPOR2Q9Y4F9 1068 aa20.81■□□□□ 0.92
SSH1-208ENST00000548522 CHAF1AQ13111 956 aaPredicted RBP20.8■□□□□ 0.92
SSH1-208ENST00000548522 LRRC24Q50LG9 513 aa20.8■□□□□ 0.92
SSH1-208ENST00000548522 ANKRD44Q8N8A2 993 aa20.79■□□□□ 0.92
SSH1-208ENST00000548522 EFCC1Q9HA90 598 aa20.79■□□□□ 0.92
SSH1-208ENST00000548522 SP3Q02447 781 aa20.78■□□□□ 0.92
SSH1-208ENST00000548522 OTUD7BQ6GQQ9 843 aa20.78■□□□□ 0.92
SSH1-208ENST00000548522 FBXO33Q7Z6M2 555 aa20.78■□□□□ 0.92
SSH1-208ENST00000548522 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.78■□□□□ 0.92
SSH1-208ENST00000548522 KLHDC4Q8TBB5 520 aa20.78■□□□□ 0.92
SSH1-208ENST00000548522 UTYO14607 1347 aa20.78■□□□□ 0.92
SSH1-208ENST00000548522 MROH5Q6ZUA9 1318 aa20.78■□□□□ 0.92
SSH1-208ENST00000548522 CCL15-CCL14A0A0B4J2E2 113 aa20.77■□□□□ 0.92
SSH1-208ENST00000548522 CCL15Q16663 113 aa20.77■□□□□ 0.92
SSH1-208ENST00000548522 RABL6Q3YEC7 729 aaPredicted RBP20.77■□□□□ 0.92
SSH1-208ENST00000548522 FAM43AQ8N2R8 423 aa20.77■□□□□ 0.92
SSH1-208ENST00000548522 VGLL2Q8N8G2 317 aa20.77■□□□□ 0.92
SSH1-208ENST00000548522 ARMC5Q96C12 935 aa20.77■□□□□ 0.92
SSH1-208ENST00000548522 OTUD5Q96G74 571 aa20.77■□□□□ 0.92
SSH1-208ENST00000548522 ANP32CO43423 234 aa20.76■□□□□ 0.91
SSH1-208ENST00000548522 EN2P19622 333 aaPredicted RBP20.76■□□□□ 0.91
SSH1-208ENST00000548522 METTL24Q5JXM2 366 aa20.76■□□□□ 0.91
SSH1-208ENST00000548522 KIAA0100Q14667 2235 aaKnown RBP20.76■□□□□ 0.91
SSH1-208ENST00000548522 MAP3K9P80192 1104 aa20.75■□□□□ 0.91
SSH1-208ENST00000548522 TAF1CQ15572 869 aaPredicted RBP20.75■□□□□ 0.91
SSH1-208ENST00000548522 INTS3Q68E01 1043 aaKnown RBP20.75■□□□□ 0.91
SSH1-208ENST00000548522 VPS37DQ86XT2 251 aa20.75■□□□□ 0.91
SSH1-208ENST00000548522 FAM9BQ8IZU0 186 aa20.75■□□□□ 0.91
SSH1-208ENST00000548522 SNCAIPQ9Y6H5 919 aa20.75■□□□□ 0.91
SSH1-208ENST00000548522 BCAMP50895 628 aa20.74■□□□□ 0.91
SSH1-208ENST00000548522 CSADQ9Y600 493 aa20.74■□□□□ 0.91
SSH1-208ENST00000548522 RBBP6Q7Z6E9 1792 aaKnown RBP20.74■□□□□ 0.91
SSH1-208ENST00000548522 TNNI2P48788 182 aa20.73■□□□□ 0.91
SSH1-208ENST00000548522 MRPL50Q8N5N7 158 aaKnown RBP20.73■□□□□ 0.91
SSH1-208ENST00000548522 TEKT1Q969V4 418 aa20.73■□□□□ 0.91
SSH1-208ENST00000548522 PTCH2Q9Y6C5 1203 aa20.73■□□□□ 0.91
SSH1-208ENST00000548522 ZSWIM8A7E2V4 1837 aa20.73■□□□□ 0.91
SSH1-208ENST00000548522 ZNF521Q96K83 1311 aa20.73■□□□□ 0.91
SSH1-208ENST00000548522 SPDYE5A6NIY4 337 aa20.72■□□□□ 0.91
SSH1-208ENST00000548522 FRAT2O75474 233 aaPredicted RBP20.72■□□□□ 0.91
SSH1-208ENST00000548522 PDE8BO95263 885 aa20.72■□□□□ 0.91
SSH1-208ENST00000548522 GTF2A2P52657 109 aa20.72■□□□□ 0.91
SSH1-208ENST00000548522 APOBEC3HQ6NTF7 200 aaKnown RBP20.72■□□□□ 0.91
SSH1-208ENST00000548522 ZKSCAN4Q969J2 545 aaPredicted RBP20.72■□□□□ 0.91
SSH1-208ENST00000548522 ZNF333Q96JL9 665 aa20.72■□□□□ 0.91
SSH1-208ENST00000548522 WRNIP1Q96S55 665 aa20.72■□□□□ 0.91
SSH1-208ENST00000548522 ARHGAP39Q9C0H5 1083 aa20.72■□□□□ 0.91
SSH1-208ENST00000548522 MYCP01106 439 aaPredicted RBP20.71■□□□□ 0.91
SSH1-208ENST00000548522 HDLBPQ00341 1268 aaKnown RBP20.71■□□□□ 0.91
SSH1-208ENST00000548522 CAVIN4Q5BKX8 364 aa20.71■□□□□ 0.91
SSH1-208ENST00000548522 TBC1D22AQ8WUA7 517 aa20.71■□□□□ 0.91
SSH1-208ENST00000548522 ZDHHC15Q96MV8 337 aa20.71■□□□□ 0.91
SSH1-208ENST00000548522 ZFYVE28Q9HCC9 887 aa20.71■□□□□ 0.91
SSH1-208ENST00000548522 BTBD19C9JJ37 291 aa20.69■□□□□ 0.9
SSH1-208ENST00000548522 IRF6O14896 467 aa20.69■□□□□ 0.9
SSH1-208ENST00000548522 ECM2O94769 699 aaPredicted RBP20.69■□□□□ 0.9
SSH1-208ENST00000548522 FGFR2P21802 821 aa20.69■□□□□ 0.9
SSH1-208ENST00000548522 SLC9C1Q4G0N8 1177 aa20.68■□□□□ 0.9
SSH1-208ENST00000548522 HABP4Q5JVS0 413 aaKnown RBP20.68■□□□□ 0.9
SSH1-208ENST00000548522 USP44Q9H0E7 712 aa20.68■□□□□ 0.9
SSH1-208ENST00000548522 RFX5P48382 616 aaPredicted RBP20.67■□□□□ 0.9
SSH1-208ENST00000548522 PUM3Q15397 648 aaKnown RBP20.67■□□□□ 0.9
SSH1-208ENST00000548522 MIGA2Q7L4E1 593 aa20.67■□□□□ 0.9
SSH1-208ENST00000548522 FAM83AQ86UY5 434 aa20.67■□□□□ 0.9
SSH1-208ENST00000548522 ERO1BQ86YB8 467 aa20.67■□□□□ 0.9
SSH1-208ENST00000548522 SH3TC2Q8TF17 1288 aa20.67■□□□□ 0.9
SSH1-208ENST00000548522 SSH1Q8WYL5 1049 aa20.67■□□□□ 0.9
SSH1-208ENST00000548522 TMOD2Q9NZR1 351 aa20.67■□□□□ 0.9
SSH1-208ENST00000548522 TLR2O60603 784 aa20.66■□□□□ 0.9
SSH1-208ENST00000548522 CETPP11597 493 aa20.66■□□□□ 0.9
SSH1-208ENST00000548522 INPP5BP32019 993 aa20.66■□□□□ 0.9
SSH1-208ENST00000548522 GCC1Q96CN9 775 aa20.66■□□□□ 0.9
SSH1-208ENST00000548522 RPAP1Q9BWH6 1393 aaPredicted RBP20.66■□□□□ 0.9
SSH1-208ENST00000548522 PTPRCP08575 1304 aa20.65■□□□□ 0.9
SSH1-208ENST00000548522 KIF16BQ96L93 1317 aa20.65■□□□□ 0.9
SSH1-208ENST00000548522 LACTBP83111 547 aaPredicted RBP20.65■□□□□ 0.9
SSH1-208ENST00000548522 PPIL2Q13356 520 aa20.65■□□□□ 0.9
SSH1-208ENST00000548522 SNAPC2Q13487 334 aa20.65■□□□□ 0.9
SSH1-208ENST00000548522 DIXDC1Q155Q3 683 aa20.65■□□□□ 0.9
SSH1-208ENST00000548522 FKBP1CQ5VVH2 108 aa20.65■□□□□ 0.9
SSH1-208ENST00000548522 TMEM106CQ9BVX2 250 aa20.65■□□□□ 0.9
SSH1-208ENST00000548522 MAST3O60307 1309 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms