RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 PKN2Q16513 984 aaKnown RBP25.57■■□□□ 1.68
SSH1-207ENST00000547862 CAVIN4Q5BKX8 364 aa25.57■■□□□ 1.68
SSH1-207ENST00000547862 ELP3Q9H9T3 547 aa25.57■■□□□ 1.68
SSH1-207ENST00000547862 ALDH1A1P00352 501 aa25.56■■□□□ 1.68
SSH1-207ENST00000547862 ANKRD13AQ8IZ07 590 aa25.56■■□□□ 1.68
SSH1-207ENST00000547862 CACNB3P54284 484 aa25.55■■□□□ 1.68
SSH1-207ENST00000547862 FBXO33Q7Z6M2 555 aa25.55■■□□□ 1.68
SSH1-207ENST00000547862 TMEM39BQ9GZU3 492 aa25.55■■□□□ 1.68
SSH1-207ENST00000547862 SMC4Q9NTJ3 1288 aa25.55■■□□□ 1.68
SSH1-207ENST00000547862 PDE4DIPQ5VU43 2346 aa25.54■■□□□ 1.68
SSH1-207ENST00000547862 PDE8BO95263 885 aa25.54■■□□□ 1.68
SSH1-207ENST00000547862 BCAMP50895 628 aa25.54■■□□□ 1.68
SSH1-207ENST00000547862 NOM1Q5C9Z4 860 aaKnown RBP25.54■■□□□ 1.68
SSH1-207ENST00000547862 FBXO46Q6PJ61 603 aaPredicted RBP25.54■■□□□ 1.68
SSH1-207ENST00000547862 VGLL2Q8N8G2 317 aa25.54■■□□□ 1.68
SSH1-207ENST00000547862 CFHR5Q9BXR6 569 aa25.54■■□□□ 1.68
SSH1-207ENST00000547862 TNNI2P48788 182 aa25.53■■□□□ 1.68
SSH1-207ENST00000547862 OPTNQ96CV9 577 aa25.53■■□□□ 1.68
SSH1-207ENST00000547862 CDCA7LQ96GN5 454 aa25.53■■□□□ 1.68
SSH1-207ENST00000547862 USP44Q9H0E7 712 aa25.53■■□□□ 1.68
SSH1-207ENST00000547862 INHBEP58166 350 aa25.52■■□□□ 1.68
SSH1-207ENST00000547862 SLFN5Q08AF3 891 aa25.52■■□□□ 1.68
SSH1-207ENST00000547862 TBC1D22AQ8WUA7 517 aa25.52■■□□□ 1.68
SSH1-207ENST00000547862 TRIM17Q9Y577 477 aa25.52■■□□□ 1.68
SSH1-207ENST00000547862 AK9Q5TCS8 1911 aa25.52■■□□□ 1.68
SSH1-207ENST00000547862 IFIT1P09914 478 aaKnown RBP25.51■■□□□ 1.67
SSH1-207ENST00000547862 PUM3Q15397 648 aaKnown RBP25.51■■□□□ 1.67
SSH1-207ENST00000547862 CNKSR2Q8WXI2 1034 aa25.51■■□□□ 1.67
SSH1-207ENST00000547862 TEKT1Q969V4 418 aa25.51■■□□□ 1.67
SSH1-207ENST00000547862 TEPSINQ96N21 525 aa25.51■■□□□ 1.67
SSH1-207ENST00000547862 CRHR2Q13324 411 aa25.5■■□□□ 1.67
SSH1-207ENST00000547862 VGLL4Q14135 290 aa25.49■■□□□ 1.67
SSH1-207ENST00000547862 SIL1Q9H173 461 aa25.49■■□□□ 1.67
SSH1-207ENST00000547862 TMOD2Q9NZR1 351 aa25.49■■□□□ 1.67
SSH1-207ENST00000547862 UNCXA6NJT0 531 aa25.48■■□□□ 1.67
SSH1-207ENST00000547862 SLC5A1P13866 664 aa25.48■■□□□ 1.67
SSH1-207ENST00000547862 OTUD7BQ6GQQ9 843 aa25.48■■□□□ 1.67
SSH1-207ENST00000547862 CD99L2Q8TCZ2 262 aa25.48■■□□□ 1.67
SSH1-207ENST00000547862 EYA2O00167 538 aa25.47■■□□□ 1.67
SSH1-207ENST00000547862 ALDH1L2Q3SY69 923 aa25.47■■□□□ 1.67
SSH1-207ENST00000547862 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.47■■□□□ 1.67
SSH1-207ENST00000547862 OTOP1Q7RTM1 612 aa25.47■■□□□ 1.67
SSH1-207ENST00000547862 OTUD5Q96G74 571 aa25.47■■□□□ 1.67
SSH1-207ENST00000547862 CSADQ9Y600 493 aa25.47■■□□□ 1.67
SSH1-207ENST00000547862 MAST3O60307 1309 aa25.46■■□□□ 1.67
SSH1-207ENST00000547862 RFX5P48382 616 aaPredicted RBP25.46■■□□□ 1.67
SSH1-207ENST00000547862 PTPN18Q99952 460 aa25.46■■□□□ 1.67
SSH1-207ENST00000547862 ZSWIM8A7E2V4 1837 aa25.46■■□□□ 1.67
SSH1-207ENST00000547862 UBTFL1P0CB47 393 aaPredicted RBP25.45■■□□□ 1.66
SSH1-207ENST00000547862 FGFR2P21802 821 aa25.45■■□□□ 1.66
SSH1-207ENST00000547862 HDLBPQ00341 1268 aaKnown RBP25.45■■□□□ 1.66
SSH1-207ENST00000547862 ERO1AQ96HE7 468 aa25.45■■□□□ 1.66
SSH1-207ENST00000547862 CCL15-CCL14A0A0B4J2E2 113 aa25.44■■□□□ 1.66
SSH1-207ENST00000547862 SLC34A2O95436 690 aa25.44■■□□□ 1.66
SSH1-207ENST00000547862 MAP3K9P80192 1104 aa25.44■■□□□ 1.66
SSH1-207ENST00000547862 CCL15Q16663 113 aa25.44■■□□□ 1.66
SSH1-207ENST00000547862 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.44■■□□□ 1.66
SSH1-207ENST00000547862 ZDHHC15Q96MV8 337 aa25.44■■□□□ 1.66
SSH1-207ENST00000547862 HTTP42858 3142 aa25.43■■□□□ 1.66
SSH1-207ENST00000547862 KIF16BQ96L93 1317 aa25.43■■□□□ 1.66
SSH1-207ENST00000547862 BRI3BPQ8WY22 251 aa25.43■■□□□ 1.66
SSH1-207ENST00000547862 LPIN2Q92539 896 aa25.43■■□□□ 1.66
SSH1-207ENST00000547862 WRNIP1Q96S55 665 aa25.43■■□□□ 1.66
SSH1-207ENST00000547862 TAF1CQ15572 869 aaPredicted RBP25.42■■□□□ 1.66
SSH1-207ENST00000547862 ATG9AQ7Z3C6 839 aa25.42■■□□□ 1.66
SSH1-207ENST00000547862 NOB1Q9ULX3 412 aaKnown RBP25.42■■□□□ 1.66
SSH1-207ENST00000547862 DOCK2Q92608 1830 aa25.42■■□□□ 1.66
SSH1-207ENST00000547862 MYH2Q9UKX2 1941 aa25.41■■□□□ 1.66
SSH1-207ENST00000547862 ATP2B3Q16720 1220 aa25.41■■□□□ 1.66
SSH1-207ENST00000547862 APOBEC3HQ6NTF7 200 aaKnown RBP25.41■■□□□ 1.66
SSH1-207ENST00000547862 MS4A4AQ96JQ5 239 aa25.41■■□□□ 1.66
SSH1-207ENST00000547862 LRRFIP2Q9Y608 721 aaKnown RBP25.41■■□□□ 1.66
SSH1-207ENST00000547862 RBBP6Q7Z6E9 1792 aaKnown RBP25.41■■□□□ 1.66
SSH1-207ENST00000547862 TESPA1A2RU30 521 aaPredicted RBP25.4■■□□□ 1.66
SSH1-207ENST00000547862 GTF2A2P52657 109 aa25.4■■□□□ 1.66
SSH1-207ENST00000547862 SP3Q02447 781 aa25.4■■□□□ 1.66
SSH1-207ENST00000547862 DIXDC1Q155Q3 683 aa25.4■■□□□ 1.66
SSH1-207ENST00000547862 WDR66Q8TBY9 1149 aa25.4■■□□□ 1.66
SSH1-207ENST00000547862 ZKSCAN4Q969J2 545 aaPredicted RBP25.4■■□□□ 1.66
SSH1-207ENST00000547862 PA2G4Q9UQ80 394 aaKnown RBP25.4■■□□□ 1.66
SSH1-207ENST00000547862 SNCAIPQ9Y6H5 919 aa25.4■■□□□ 1.66
SSH1-207ENST00000547862 EFCC1Q9HA90 598 aa25.39■■□□□ 1.66
SSH1-207ENST00000547862 SUGT1Q9Y2Z0 365 aa25.39■■□□□ 1.66
SSH1-207ENST00000547862 SPDYE5A6NIY4 337 aa25.38■■□□□ 1.65
SSH1-207ENST00000547862 PRDX5P30044 214 aa25.38■■□□□ 1.65
SSH1-207ENST00000547862 CAP1Q01518 475 aa25.38■■□□□ 1.65
SSH1-207ENST00000547862 TCP10Q12799 353 aa25.38■■□□□ 1.65
SSH1-207ENST00000547862 MIGA2Q7L4E1 593 aa25.38■■□□□ 1.65
SSH1-207ENST00000547862 FAM83AQ86UY5 434 aa25.38■■□□□ 1.65
SSH1-207ENST00000547862 FAM43AQ8N2R8 423 aa25.38■■□□□ 1.65
SSH1-207ENST00000547862 CEP126Q9P2H0 1117 aa25.38■■□□□ 1.65
SSH1-207ENST00000547862 PTPN22Q9Y2R2 807 aa25.38■■□□□ 1.65
SSH1-207ENST00000547862 RPAP1Q9BWH6 1393 aaPredicted RBP25.38■■□□□ 1.65
SSH1-207ENST00000547862 HHIPL2Q6UWX4 724 aa25.37■■□□□ 1.65
SSH1-207ENST00000547862 API5Q9BZZ5 524 aaKnown RBP25.37■■□□□ 1.65
SSH1-207ENST00000547862 ZFYVE28Q9HCC9 887 aa25.37■■□□□ 1.65
SSH1-207ENST00000547862 DAGLAQ9Y4D2 1042 aa25.37■■□□□ 1.65
SSH1-207ENST00000547862 PHKA1P46020 1223 aa25.36■■□□□ 1.65
SSH1-207ENST00000547862 PRPF38BQ5VTL8 546 aaKnown RBP25.36■■□□□ 1.65
SSH1-207ENST00000547862 DCAF15Q66K64 600 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms