RNA–Protein interactions for RNA: ENST00000547807.5

TROAP-205, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-205ENST00000547807 ZBTB40Q9NUA8 1239 aa13.27□□□□□ -0.29
TROAP-205ENST00000547807 USP17L3A6NCW0 530 aa13.26□□□□□ -0.29
TROAP-205ENST00000547807 USP17L4A6NCW7 530 aa13.26□□□□□ -0.29
TROAP-205ENST00000547807 USP17L8P0C7I0 530 aa13.26□□□□□ -0.29
TROAP-205ENST00000547807 LDLRAD1Q5T700 205 aa13.26□□□□□ -0.29
TROAP-205ENST00000547807 USP17L1Q7RTZ2 530 aa13.26□□□□□ -0.29
TROAP-205ENST00000547807 UBE2Q1Q7Z7E8 422 aa13.26□□□□□ -0.29
TROAP-205ENST00000547807 AGBL3Q8NEM8 1001 aa13.26□□□□□ -0.29
TROAP-205ENST00000547807 SH3TC2Q8TF17 1288 aa13.26□□□□□ -0.29
TROAP-205ENST00000547807 MXD3Q9BW11 206 aa13.26□□□□□ -0.29
TROAP-205ENST00000547807 GREM2Q9H772 168 aa13.26□□□□□ -0.29
TROAP-205ENST00000547807 MYOZ2Q9NPC6 264 aa13.26□□□□□ -0.29
TROAP-205ENST00000547807 STAP2Q9UGK3 403 aa13.26□□□□□ -0.29
TROAP-205ENST00000547807 MINPP1Q9UNW1 487 aa13.26□□□□□ -0.29
TROAP-205ENST00000547807 TTC28Q96AY4 2481 aa13.25□□□□□ -0.29
TROAP-205ENST00000547807 ZBTB48P10074 688 aaPredicted RBP13.25□□□□□ -0.29
TROAP-205ENST00000547807 PLA2G5P39877 138 aa13.25□□□□□ -0.29
TROAP-205ENST00000547807 MTX1Q13505 466 aa13.25□□□□□ -0.29
TROAP-205ENST00000547807 PRKG1Q13976 671 aa13.25□□□□□ -0.29
TROAP-205ENST00000547807 OTUD7BQ6GQQ9 843 aa13.25□□□□□ -0.29
TROAP-205ENST00000547807 LMBR1LQ6UX01 489 aa13.25□□□□□ -0.29
TROAP-205ENST00000547807 PODNQ7Z5L7 613 aa13.25□□□□□ -0.29
TROAP-205ENST00000547807 BICC1Q9H694 974 aaKnown RBP13.25□□□□□ -0.29
TROAP-205ENST00000547807 MYH3P11055 1940 aa13.25□□□□□ -0.29
TROAP-205ENST00000547807 IFIT5Q13325 482 aaKnown RBP13.24□□□□□ -0.29
TROAP-205ENST00000547807 CCDC57Q2TAC2 916 aa13.24□□□□□ -0.29
TROAP-205ENST00000547807 EPHA10Q5JZY3 1008 aa13.24□□□□□ -0.29
TROAP-205ENST00000547807 ANKRD44Q8N8A2 993 aa13.24□□□□□ -0.29
TROAP-205ENST00000547807 NKX2-3Q8TAU0 364 aa13.24□□□□□ -0.29
TROAP-205ENST00000547807 SLC10A4Q96EP9 437 aa13.24□□□□□ -0.29
TROAP-205ENST00000547807 BSDC1Q9NW68 430 aaPredicted RBP13.24□□□□□ -0.29
TROAP-205ENST00000547807 LRRFIP2Q9Y608 721 aaKnown RBP13.24□□□□□ -0.29
TROAP-205ENST00000547807 MUC3AQ02505 3323 aa13.23□□□□□ -0.29
TROAP-205ENST00000547807 PRUNE2Q8WUY3 3088 aa13.23□□□□□ -0.29
TROAP-205ENST00000547807 ANKRD18BA2A2Z9 1011 aa13.23□□□□□ -0.29
TROAP-205ENST00000547807 ITGA6P23229 1130 aa13.23□□□□□ -0.29
TROAP-205ENST00000547807 IGHMBP2P38935 993 aaKnown RBP13.23□□□□□ -0.29
TROAP-205ENST00000547807 NBPF9Q3BBW0 867 aa13.23□□□□□ -0.29
TROAP-205ENST00000547807 RPAP2Q8IXW5 612 aaPredicted RBP13.23□□□□□ -0.29
TROAP-205ENST00000547807 WNK4Q96J92 1243 aa13.23□□□□□ -0.29
TROAP-205ENST00000547807 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.23□□□□□ -0.29
TROAP-205ENST00000547807 ANGEL1Q9UNK9 670 aaKnown RBP13.23□□□□□ -0.29
TROAP-205ENST00000547807 ZSWIM8A7E2V4 1837 aa13.23□□□□□ -0.29
TROAP-205ENST00000547807 ATP8B2P98198 1209 aa13.22□□□□□ -0.29
TROAP-205ENST00000547807 TXNRD3Q86VQ6 643 aa13.22□□□□□ -0.29
TROAP-205ENST00000547807 OGFOD1Q8N543 542 aa13.22□□□□□ -0.29
TROAP-205ENST00000547807 CRBNQ96SW2 442 aa13.22□□□□□ -0.29
TROAP-205ENST00000547807 GMLQ99445 158 aa13.22□□□□□ -0.29
TROAP-205ENST00000547807 MPHOSPH8Q99549 860 aa13.22□□□□□ -0.29
TROAP-205ENST00000547807 RAPGEFL1Q9UHV5 662 aa13.22□□□□□ -0.29
TROAP-205ENST00000547807 RPTORQ8N122 1335 aa13.21□□□□□ -0.29
TROAP-205ENST00000547807 EVI5O60447 810 aa13.21□□□□□ -0.29
TROAP-205ENST00000547807 BMP8BP34820 402 aa13.21□□□□□ -0.29
TROAP-205ENST00000547807 KCNJ4P48050 445 aa13.21□□□□□ -0.29
TROAP-205ENST00000547807 MTFR1Q15390 333 aa13.21□□□□□ -0.29
TROAP-205ENST00000547807 LRIT3Q3SXY7 679 aa13.21□□□□□ -0.29
TROAP-205ENST00000547807 FAM122AQ96E09 287 aa13.21□□□□□ -0.29
TROAP-205ENST00000547807 FBXO3Q9UK99 471 aa13.21□□□□□ -0.29
TROAP-205ENST00000547807 CHMP3Q9Y3E7 222 aa13.21□□□□□ -0.29
TROAP-205ENST00000547807 ALPK3Q96L96 1907 aa13.2□□□□□ -0.3
TROAP-205ENST00000547807 SRGAP3O43295 1099 aa13.2□□□□□ -0.3
TROAP-205ENST00000547807 GJA8P48165 433 aa13.2□□□□□ -0.3
TROAP-205ENST00000547807 TAF7LQ5H9L4 462 aa13.2□□□□□ -0.3
TROAP-205ENST00000547807 DACT2Q5SW24 774 aa13.2□□□□□ -0.3
TROAP-205ENST00000547807 TTLL5Q6EMB2 1281 aa13.2□□□□□ -0.3
TROAP-205ENST00000547807 COA1Q9GZY4 146 aa13.2□□□□□ -0.3
TROAP-205ENST00000547807 LEMD3Q9Y2U8 911 aa13.2□□□□□ -0.3
TROAP-205ENST00000547807 MED23Q9ULK4 1368 aa13.2□□□□□ -0.3
TROAP-205ENST00000547807 ZNF804BA4D1E1 1349 aa13.19□□□□□ -0.3
TROAP-205ENST00000547807 WNT10BO00744 389 aa13.19□□□□□ -0.3
TROAP-205ENST00000547807 HMMRO75330 724 aa13.19□□□□□ -0.3
TROAP-205ENST00000547807 SASH1O94885 1247 aa13.19□□□□□ -0.3
TROAP-205ENST00000547807 KLRK1P26718 216 aa13.19□□□□□ -0.3
TROAP-205ENST00000547807 GTF2IP78347 998 aa13.19□□□□□ -0.3
TROAP-205ENST00000547807 STRIP1Q5VSL9 837 aa13.19□□□□□ -0.3
TROAP-205ENST00000547807 CEP85Q6P2H3 762 aa13.19□□□□□ -0.3
TROAP-205ENST00000547807 KIAA0825Q8IV33 1275 aa13.19□□□□□ -0.3
TROAP-205ENST00000547807 SSH3Q8TE77 659 aa13.19□□□□□ -0.3
TROAP-205ENST00000547807 CLMNQ96JQ2 1002 aa13.19□□□□□ -0.3
TROAP-205ENST00000547807 PTPN18Q99952 460 aa13.19□□□□□ -0.3
TROAP-205ENST00000547807 GDF15Q99988 308 aa13.19□□□□□ -0.3
TROAP-205ENST00000547807 ANKRD2Q9GZV1 360 aa13.19□□□□□ -0.3
TROAP-205ENST00000547807 FZD1Q9UP38 647 aa13.19□□□□□ -0.3
TROAP-205ENST00000547807 SNAP23O00161 211 aa13.18□□□□□ -0.3
TROAP-205ENST00000547807 TAF5LO75529 589 aa13.18□□□□□ -0.3
TROAP-205ENST00000547807 FARP2O94887 1054 aaPredicted RBP13.18□□□□□ -0.3
TROAP-205ENST00000547807 GJB1P08034 283 aa13.18□□□□□ -0.3
TROAP-205ENST00000547807 HOXD11P31277 338 aaPredicted RBP13.18□□□□□ -0.3
TROAP-205ENST00000547807 RFX5P48382 616 aaPredicted RBP13.18□□□□□ -0.3
TROAP-205ENST00000547807 POLA2Q14181 598 aa13.18□□□□□ -0.3
TROAP-205ENST00000547807 LDHAL6AQ6ZMR3 332 aa13.18□□□□□ -0.3
TROAP-205ENST00000547807 HELBQ8NG08 1087 aaPredicted RBP13.18□□□□□ -0.3
TROAP-205ENST00000547807 C1orf115Q9H7X2 142 aa13.18□□□□□ -0.3
TROAP-205ENST00000547807 COPRSQ9NQ92 184 aa13.18□□□□□ -0.3
TROAP-205ENST00000547807 TESPA1A2RU30 521 aaPredicted RBP13.17□□□□□ -0.3
TROAP-205ENST00000547807 CIAO1O76071 339 aa13.17□□□□□ -0.3
TROAP-205ENST00000547807 NEFLP07196 543 aa13.17□□□□□ -0.3
TROAP-205ENST00000547807 BCAMP50895 628 aa13.17□□□□□ -0.3
TROAP-205ENST00000547807 CHRNDQ07001 517 aa13.17□□□□□ -0.3
TROAP-205ENST00000547807 MAP3K11Q16584 847 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms