RNA–Protein interactions for RNA: ENST00000547369.5

GCN1-203, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-203ENST00000547369 CHAF1AQ13111 956 aaPredicted RBP23.38■■□□□ 1.33
GCN1-203ENST00000547369 GRIK5Q16478 980 aa23.38■■□□□ 1.33
GCN1-203ENST00000547369 CDCA7LQ96GN5 454 aa23.38■■□□□ 1.33
GCN1-203ENST00000547369 R3HDMLQ9H3Y0 253 aa23.38■■□□□ 1.33
GCN1-203ENST00000547369 HPS5Q9UPZ3 1129 aa23.38■■□□□ 1.33
GCN1-203ENST00000547369 FKTNO75072 461 aa23.37■■□□□ 1.33
GCN1-203ENST00000547369 IFNL1Q8IU54 200 aa23.37■■□□□ 1.33
GCN1-203ENST00000547369 ANKRD13AQ8IZ07 590 aa23.37■■□□□ 1.33
GCN1-203ENST00000547369 TBC1D22AQ8WUA7 517 aa23.37■■□□□ 1.33
GCN1-203ENST00000547369 SMC4Q9NTJ3 1288 aa23.36■■□□□ 1.33
GCN1-203ENST00000547369 OTOFQ9HC10 1997 aa23.35■■□□□ 1.33
GCN1-203ENST00000547369 TCP10L2B9ZVM9 353 aa23.35■■□□□ 1.33
GCN1-203ENST00000547369 BCAMP50895 628 aa23.35■■□□□ 1.33
GCN1-203ENST00000547369 HDLBPQ00341 1268 aaKnown RBP23.35■■□□□ 1.33
GCN1-203ENST00000547369 TEPSINQ96N21 525 aa23.35■■□□□ 1.33
GCN1-203ENST00000547369 IFIT1P09914 478 aaKnown RBP23.34■■□□□ 1.33
GCN1-203ENST00000547369 FGFR2P21802 821 aa23.34■■□□□ 1.33
GCN1-203ENST00000547369 GJA5P36382 358 aa23.34■■□□□ 1.33
GCN1-203ENST00000547369 RFX5P48382 616 aaPredicted RBP23.34■■□□□ 1.33
GCN1-203ENST00000547369 TNNI2P48788 182 aa23.34■■□□□ 1.33
GCN1-203ENST00000547369 PUM3Q15397 648 aaKnown RBP23.34■■□□□ 1.33
GCN1-203ENST00000547369 CDAN1Q8IWY9 1227 aa23.34■■□□□ 1.33
GCN1-203ENST00000547369 TRMT2AQ8IZ69 625 aaKnown RBP23.34■■□□□ 1.33
GCN1-203ENST00000547369 KIF16BQ96L93 1317 aa23.33■■□□□ 1.33
GCN1-203ENST00000547369 EYA2O00167 538 aa23.33■■□□□ 1.33
GCN1-203ENST00000547369 IGF2BP3O00425 579 aaKnown RBP eCLIP23.33■■□□□ 1.33
GCN1-203ENST00000547369 TEKT1Q969V4 418 aa23.33■■□□□ 1.33
GCN1-203ENST00000547369 TMEM39BQ9GZU3 492 aa23.33■■□□□ 1.33
GCN1-203ENST00000547369 FBXO46Q6PJ61 603 aaPredicted RBP23.32■■□□□ 1.32
GCN1-203ENST00000547369 PDE4DIPQ5VU43 2346 aa23.32■■□□□ 1.32
GCN1-203ENST00000547369 MRIQ9BWK5 157 aa23.31■■□□□ 1.32
GCN1-203ENST00000547369 ELP3Q9H9T3 547 aa23.31■■□□□ 1.32
GCN1-203ENST00000547369 SUGT1Q9Y2Z0 365 aa23.31■■□□□ 1.32
GCN1-203ENST00000547369 MYH13Q9UKX3 1938 aa23.3■■□□□ 1.32
GCN1-203ENST00000547369 CT47B1P0C2W7 299 aaPredicted RBP23.3■■□□□ 1.32
GCN1-203ENST00000547369 SLC5A1P13866 664 aa23.3■■□□□ 1.32
GCN1-203ENST00000547369 OTUD7BQ6GQQ9 843 aa23.3■■□□□ 1.32
GCN1-203ENST00000547369 OPTNQ96CV9 577 aa23.3■■□□□ 1.32
GCN1-203ENST00000547369 ZDHHC15Q96MV8 337 aa23.3■■□□□ 1.32
GCN1-203ENST00000547369 MAST3O60307 1309 aa23.3■■□□□ 1.32
GCN1-203ENST00000547369 TESPA1A2RU30 521 aaPredicted RBP23.29■■□□□ 1.32
GCN1-203ENST00000547369 UBTFL1P0CB47 393 aaPredicted RBP23.29■■□□□ 1.32
GCN1-203ENST00000547369 CACNB3P54284 484 aa23.29■■□□□ 1.32
GCN1-203ENST00000547369 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.29■■□□□ 1.32
GCN1-203ENST00000547369 ATG9AQ7Z3C6 839 aa23.29■■□□□ 1.32
GCN1-203ENST00000547369 LPIN2Q92539 896 aa23.29■■□□□ 1.32
GCN1-203ENST00000547369 NOB1Q9ULX3 412 aaKnown RBP23.29■■□□□ 1.32
GCN1-203ENST00000547369 MAP3K9P80192 1104 aa23.28■■□□□ 1.32
GCN1-203ENST00000547369 TMOD2Q9NZR1 351 aa23.28■■□□□ 1.32
GCN1-203ENST00000547369 VGLL4Q14135 290 aa23.27■■□□□ 1.32
GCN1-203ENST00000547369 APOBEC3HQ6NTF7 200 aaKnown RBP23.27■■□□□ 1.32
GCN1-203ENST00000547369 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.27■■□□□ 1.32
GCN1-203ENST00000547369 WDR66Q8TBY9 1149 aa23.27■■□□□ 1.32
GCN1-203ENST00000547369 PTPN18Q99952 460 aa23.27■■□□□ 1.32
GCN1-203ENST00000547369 API5Q9BZZ5 524 aaKnown RBP23.27■■□□□ 1.32
GCN1-203ENST00000547369 FBXO3Q9UK99 471 aa23.27■■□□□ 1.32
GCN1-203ENST00000547369 CRHR2Q13324 411 aa23.26■■□□□ 1.31
GCN1-203ENST00000547369 FKBP1CQ5VVH2 108 aa23.26■■□□□ 1.31
GCN1-203ENST00000547369 HHIPL2Q6UWX4 724 aa23.26■■□□□ 1.31
GCN1-203ENST00000547369 FAM83AQ86UY5 434 aa23.26■■□□□ 1.31
GCN1-203ENST00000547369 CNKSR2Q8WXI2 1034 aa23.26■■□□□ 1.31
GCN1-203ENST00000547369 MS4A4AQ96JQ5 239 aa23.26■■□□□ 1.31
GCN1-203ENST00000547369 SIL1Q9H173 461 aa23.26■■□□□ 1.31
GCN1-203ENST00000547369 TRIM17Q9Y577 477 aa23.26■■□□□ 1.31
GCN1-203ENST00000547369 CSADQ9Y600 493 aa23.26■■□□□ 1.31
GCN1-203ENST00000547369 TNRC18O15417 2968 aaPredicted RBP23.26■■□□□ 1.31
GCN1-203ENST00000547369 CIAO1O76071 339 aa23.25■■□□□ 1.31
GCN1-203ENST00000547369 ATP2B3Q16720 1220 aa23.24■■□□□ 1.31
GCN1-203ENST00000547369 OTOP1Q7RTM1 612 aa23.24■■□□□ 1.31
GCN1-203ENST00000547369 ERO1AQ96HE7 468 aa23.24■■□□□ 1.31
GCN1-203ENST00000547369 CEP126Q9P2H0 1117 aa23.24■■□□□ 1.31
GCN1-203ENST00000547369 HDAC5Q9UQL6 1122 aa23.24■■□□□ 1.31
GCN1-203ENST00000547369 LRRFIP2Q9Y608 721 aaKnown RBP23.24■■□□□ 1.31
GCN1-203ENST00000547369 HOOK2Q96ED9 719 aa23.23■■□□□ 1.31
GCN1-203ENST00000547369 CCER2I3L3R5 266 aa23.22■■□□□ 1.31
GCN1-203ENST00000547369 GTF2A2P52657 109 aa23.22■■□□□ 1.31
GCN1-203ENST00000547369 BRI3BPQ8WY22 251 aa23.22■■□□□ 1.31
GCN1-203ENST00000547369 OTUD5Q96G74 571 aa23.22■■□□□ 1.31
GCN1-203ENST00000547369 CCL15-CCL14A0A0B4J2E2 113 aa23.21■■□□□ 1.31
GCN1-203ENST00000547369 IL15P40933 162 aaPredicted RBP23.21■■□□□ 1.31
GCN1-203ENST00000547369 CCL15Q16663 113 aa23.21■■□□□ 1.31
GCN1-203ENST00000547369 CD99L2Q8TCZ2 262 aa23.21■■□□□ 1.31
GCN1-203ENST00000547369 WRNIP1Q96S55 665 aa23.21■■□□□ 1.31
GCN1-203ENST00000547369 GNL3LQ9NVN8 582 aaKnown RBP23.21■■□□□ 1.31
GCN1-203ENST00000547369 RPAP1Q9BWH6 1393 aaPredicted RBP23.21■■□□□ 1.31
GCN1-203ENST00000547369 SPDYE5A6NIY4 337 aa23.2■■□□□ 1.3
GCN1-203ENST00000547369 RARSP54136 660 aaKnown RBP23.2■■□□□ 1.3
GCN1-203ENST00000547369 SP3Q02447 781 aa23.2■■□□□ 1.3
GCN1-203ENST00000547369 MEIS3Q99687 375 aa23.2■■□□□ 1.3
GCN1-203ENST00000547369 PA2G4Q9UQ80 394 aaKnown RBP23.2■■□□□ 1.3
GCN1-203ENST00000547369 DAGLAQ9Y4D2 1042 aa23.2■■□□□ 1.3
GCN1-203ENST00000547369 SNCAIPQ9Y6H5 919 aa23.2■■□□□ 1.3
GCN1-203ENST00000547369 PRDX5P30044 214 aa23.19■■□□□ 1.3
GCN1-203ENST00000547369 DCAF15Q66K64 600 aa23.19■■□□□ 1.3
GCN1-203ENST00000547369 ERO1BQ86YB8 467 aa23.19■■□□□ 1.3
GCN1-203ENST00000547369 COPRSQ9NQ92 184 aa23.19■■□□□ 1.3
GCN1-203ENST00000547369 LDHBP07195 334 aaKnown RBP23.18■■□□□ 1.3
GCN1-203ENST00000547369 PHKA1P46020 1223 aa23.18■■□□□ 1.3
GCN1-203ENST00000547369 TAF1CQ15572 869 aaPredicted RBP23.18■■□□□ 1.3
GCN1-203ENST00000547369 DIXDC1Q155Q3 683 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms