RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 PLEKHO1Q53GL0 409 aaPredicted RBP12.34□□□□□ -0.43
NPAS3-205ENST00000547068 ZNF589Q86UQ0 364 aaPredicted RBP12.34□□□□□ -0.43
NPAS3-205ENST00000547068 WDR24Q96S15 920 aa12.34□□□□□ -0.43
NPAS3-205ENST00000547068 LLPHQ9BRT6 129 aaKnown RBP12.34□□□□□ -0.43
NPAS3-205ENST00000547068 PPP2R2CQ9Y2T4 447 aa12.34□□□□□ -0.43
NPAS3-205ENST00000547068 NLRP12P59046 1061 aa12.34□□□□□ -0.43
NPAS3-205ENST00000547068 BEND3Q5T5X7 828 aa12.34□□□□□ -0.43
NPAS3-205ENST00000547068 ADALQ6DHV7 355 aa12.34□□□□□ -0.43
NPAS3-205ENST00000547068 PA2G4Q9UQ80 394 aaKnown RBP12.34□□□□□ -0.43
NPAS3-205ENST00000547068 MED23Q9ULK4 1368 aa12.33□□□□□ -0.44
NPAS3-205ENST00000547068 SLC3A2P08195 630 aaKnown RBP12.33□□□□□ -0.44
NPAS3-205ENST00000547068 ATP1A3P13637 1013 aa12.33□□□□□ -0.44
NPAS3-205ENST00000547068 UBASH3AP57075 661 aa12.33□□□□□ -0.44
NPAS3-205ENST00000547068 MCM6Q14566 821 aa12.33□□□□□ -0.44
NPAS3-205ENST00000547068 BRD3Q15059 726 aa12.33□□□□□ -0.44
NPAS3-205ENST00000547068 DNAAF4Q8WXU2 420 aa12.33□□□□□ -0.44
NPAS3-205ENST00000547068 PDE11AQ9HCR9 933 aa12.33□□□□□ -0.44
NPAS3-205ENST00000547068 TOMM22Q9NS69 142 aa12.33□□□□□ -0.44
NPAS3-205ENST00000547068 GNAT3A8MTJ3 354 aa12.33□□□□□ -0.44
NPAS3-205ENST00000547068 EIF3CLB5ME19 914 aaKnown RBP12.33□□□□□ -0.44
NPAS3-205ENST00000547068 ARHGAP6O43182 974 aa12.33□□□□□ -0.44
NPAS3-205ENST00000547068 SERPINC1P01008 464 aa12.33□□□□□ -0.44
NPAS3-205ENST00000547068 IL2RBP14784 551 aa12.33□□□□□ -0.44
NPAS3-205ENST00000547068 GOLGA8FQ08AF8 430 aa12.33□□□□□ -0.44
NPAS3-205ENST00000547068 GOLGA8DPQ0D2H9 430 aa12.33□□□□□ -0.44
NPAS3-205ENST00000547068 APOBRQ0VD83 1088 aa12.33□□□□□ -0.44
NPAS3-205ENST00000547068 NSUN7Q8NE18 718 aaKnown RBP12.33□□□□□ -0.44
NPAS3-205ENST00000547068 MYCBPQ99417 103 aaPredicted RBP12.33□□□□□ -0.44
NPAS3-205ENST00000547068 EIF3CQ99613 913 aaKnown RBP12.33□□□□□ -0.44
NPAS3-205ENST00000547068 BOLA2Q9H3K6 86 aa12.33□□□□□ -0.44
NPAS3-205ENST00000547068 NCAPD2Q15021 1401 aa12.33□□□□□ -0.44
NPAS3-205ENST00000547068 AFF2P51816 1311 aa12.32□□□□□ -0.44
NPAS3-205ENST00000547068 PTPDC1A2A3K4 754 aa12.32□□□□□ -0.44
NPAS3-205ENST00000547068 PI4KAP2A4QPH2 592 aa12.32□□□□□ -0.44
NPAS3-205ENST00000547068 GOLGA6L9A6NEM1 432 aa12.32□□□□□ -0.44
NPAS3-205ENST00000547068 CBFA2T2O43439 604 aa12.32□□□□□ -0.44
NPAS3-205ENST00000547068 TAF5LO75529 589 aa12.32□□□□□ -0.44
NPAS3-205ENST00000547068 TOP1P11387 765 aaKnown RBP12.32□□□□□ -0.44
NPAS3-205ENST00000547068 EIF2S2P20042 333 aaKnown RBP12.32□□□□□ -0.44
NPAS3-205ENST00000547068 CFAP100Q494V2 611 aa12.32□□□□□ -0.44
NPAS3-205ENST00000547068 FOXR1Q6PIV2 292 aa12.32□□□□□ -0.44
NPAS3-205ENST00000547068 PI4KAP1Q8N8J0 262 aa12.32□□□□□ -0.44
NPAS3-205ENST00000547068 DRC1Q96MC2 740 aa12.32□□□□□ -0.44
NPAS3-205ENST00000547068 NCAPGQ9BPX3 1015 aa12.32□□□□□ -0.44
NPAS3-205ENST00000547068 LRRC2Q9BYS8 371 aa12.32□□□□□ -0.44
NPAS3-205ENST00000547068 THRAP3Q9Y2W1 955 aaKnown RBP12.32□□□□□ -0.44
NPAS3-205ENST00000547068 A0A1W2PQ27 194 aa12.32□□□□□ -0.44
NPAS3-205ENST00000547068 A0A1W2PQ64 194 aa12.32□□□□□ -0.44
NPAS3-205ENST00000547068 A0A1W2PQD8 194 aa12.32□□□□□ -0.44
NPAS3-205ENST00000547068 RPS6KA5O75582 802 aa12.32□□□□□ -0.44
NPAS3-205ENST00000547068 GUCY1B3Q02153 619 aa12.32□□□□□ -0.44
NPAS3-205ENST00000547068 MTX1Q13505 466 aa12.32□□□□□ -0.44
NPAS3-205ENST00000547068 SF3A1Q15459 793 aaKnown RBP12.32□□□□□ -0.44
NPAS3-205ENST00000547068 CCDC8Q9H0W5 538 aaPredicted RBP12.32□□□□□ -0.44
NPAS3-205ENST00000547068 IKBKBO14920 756 aa12.31□□□□□ -0.44
NPAS3-205ENST00000547068 PFKFB2O60825 505 aa12.31□□□□□ -0.44
NPAS3-205ENST00000547068 EIF3JO75822 258 aaKnown RBP12.31□□□□□ -0.44
NPAS3-205ENST00000547068 ALDH1L1O75891 902 aa12.31□□□□□ -0.44
NPAS3-205ENST00000547068 VPS72Q15906 364 aa12.31□□□□□ -0.44
NPAS3-205ENST00000547068 USPL1Q5W0Q7 1092 aa12.31□□□□□ -0.44
NPAS3-205ENST00000547068 HDXQ7Z353 690 aa12.31□□□□□ -0.44
NPAS3-205ENST00000547068 PPM1EQ8WY54 764 aa12.31□□□□□ -0.44
NPAS3-205ENST00000547068 DPF2Q92785 391 aa12.31□□□□□ -0.44
NPAS3-205ENST00000547068 DHX58Q96C10 678 aa12.31□□□□□ -0.44
NPAS3-205ENST00000547068 DEF6Q9H4E7 631 aa12.31□□□□□ -0.44
NPAS3-205ENST00000547068 BCL9LQ86UU0 1499 aa12.31□□□□□ -0.44
NPAS3-205ENST00000547068 SPATA31A1Q5TZJ5 1347 aa12.31□□□□□ -0.44
NPAS3-205ENST00000547068 ISM2Q6H9L7 571 aa12.31□□□□□ -0.44
NPAS3-205ENST00000547068 ILDR1Q86SU0 546 aaPredicted RBP12.31□□□□□ -0.44
NPAS3-205ENST00000547068 VSTM4Q8IW00 320 aa12.31□□□□□ -0.44
NPAS3-205ENST00000547068 EAF2Q96CJ1 260 aaPredicted RBP12.31□□□□□ -0.44
NPAS3-205ENST00000547068 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.31□□□□□ -0.44
NPAS3-205ENST00000547068 RTEL1Q9NZ71 1219 aa12.31□□□□□ -0.44
NPAS3-205ENST00000547068 MKRN1Q9UHC7 482 aaKnown RBP12.31□□□□□ -0.44
NPAS3-205ENST00000547068 NRAPQ86VF7 1730 aa12.31□□□□□ -0.44
NPAS3-205ENST00000547068 SPATA31A5Q5VU36 1347 aa12.3□□□□□ -0.44
NPAS3-205ENST00000547068 SPATA31A7Q8IWB4 1347 aa12.3□□□□□ -0.44
NPAS3-205ENST00000547068 CTDNEP1O95476 244 aa12.3□□□□□ -0.44
NPAS3-205ENST00000547068 ATP2B1P20020 1258 aa12.3□□□□□ -0.44
NPAS3-205ENST00000547068 STK38Q15208 465 aa12.3□□□□□ -0.44
NPAS3-205ENST00000547068 C1orf141Q5JVX7 400 aa12.3□□□□□ -0.44
NPAS3-205ENST00000547068 TMEM139Q8IV31 216 aa12.3□□□□□ -0.44
NPAS3-205ENST00000547068 HNRNPLLQ8WVV9 542 aaKnown RBP12.3□□□□□ -0.44
NPAS3-205ENST00000547068 SECISBP2LQ93073 1101 aaKnown RBP12.3□□□□□ -0.44
NPAS3-205ENST00000547068 KIFC2Q96AC6 838 aa12.3□□□□□ -0.44
NPAS3-205ENST00000547068 CDCA7Q9BWT1 371 aaPredicted RBP12.3□□□□□ -0.44
NPAS3-205ENST00000547068 HSD3B7Q9H2F3 369 aa12.3□□□□□ -0.44
NPAS3-205ENST00000547068 ZSWIM4Q9H7M6 989 aa12.3□□□□□ -0.44
NPAS3-205ENST00000547068 NEDD4P46934 1319 aa12.3□□□□□ -0.44
NPAS3-205ENST00000547068 PPFIA3O75145 1194 aa12.3□□□□□ -0.44
NPAS3-205ENST00000547068 ZNF202O95125 648 aa12.3□□□□□ -0.44
NPAS3-205ENST00000547068 CCT2P78371 535 aaKnown RBP12.3□□□□□ -0.44
NPAS3-205ENST00000547068 BEND6Q5SZJ8 279 aaPredicted RBP12.3□□□□□ -0.44
NPAS3-205ENST00000547068 SEC62Q99442 399 aaKnown RBP12.3□□□□□ -0.44
NPAS3-205ENST00000547068 BAG1Q99933 345 aaPredicted RBP12.3□□□□□ -0.44
NPAS3-205ENST00000547068 C9orf78Q9NZ63 289 aaPredicted RBP12.3□□□□□ -0.44
NPAS3-205ENST00000547068 TRPC5Q9UL62 973 aaPredicted RBP12.3□□□□□ -0.44
NPAS3-205ENST00000547068 FAN1Q9Y2M0 1017 aa12.3□□□□□ -0.44
NPAS3-205ENST00000547068 CORO7P57737 925 aa12.29□□□□□ -0.44
NPAS3-205ENST00000547068 CHMP4BP1P59074 171 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms