RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 GATA6Q92908 595 aa8.73□□□□□ -1.01
CCDC38-204ENST00000546816 METTL22Q9BUU2 404 aaPredicted RBP8.73□□□□□ -1.01
CCDC38-204ENST00000546816 ANGEL1Q9UNK9 670 aaKnown RBP8.73□□□□□ -1.01
CCDC38-204ENST00000546816 EIF4EBP3O60516 100 aaPredicted RBP8.72□□□□□ -1.01
CCDC38-204ENST00000546816 SF3B2Q13435 895 aaKnown RBP8.72□□□□□ -1.01
CCDC38-204ENST00000546816 PHLDB3Q6NSJ2 640 aa8.72□□□□□ -1.01
CCDC38-204ENST00000546816 CBLL1Q75N03 491 aa8.72□□□□□ -1.01
CCDC38-204ENST00000546816 C1orf115Q9H7X2 142 aa8.72□□□□□ -1.01
CCDC38-204ENST00000546816 CCDC87Q9NVE4 849 aa8.72□□□□□ -1.01
CCDC38-204ENST00000546816 CTSBP07858 339 aa8.71□□□□□ -1.02
CCDC38-204ENST00000546816 ADH5P11766 374 aa8.71□□□□□ -1.02
CCDC38-204ENST00000546816 ZNF423Q2M1K9 1284 aa8.71□□□□□ -1.02
CCDC38-204ENST00000546816 VSIG10LQ86VR7 867 aa8.71□□□□□ -1.02
CCDC38-204ENST00000546816 CCNJLQ8IV13 435 aa8.71□□□□□ -1.02
CCDC38-204ENST00000546816 A0A096LPE4 126 aa8.7□□□□□ -1.02
CCDC38-204ENST00000546816 A0A1W2PPZ6 126 aa8.7□□□□□ -1.02
CCDC38-204ENST00000546816 POLR3DP05423 398 aaPredicted RBP8.7□□□□□ -1.02
CCDC38-204ENST00000546816 FKBP4Q02790 459 aaKnown RBP eCLIP8.7□□□□□ -1.02
CCDC38-204ENST00000546816 PCDH1Q08174 1060 aa8.7□□□□□ -1.02
CCDC38-204ENST00000546816 CCDC82Q8N4S0 544 aa8.7□□□□□ -1.02
CCDC38-204ENST00000546816 TBC1D32Q96NH3 1257 aa8.7□□□□□ -1.02
CCDC38-204ENST00000546816 TCF12Q99081 682 aa8.7□□□□□ -1.02
CCDC38-204ENST00000546816 A0A1W2PP55 124 aa8.69□□□□□ -1.02
CCDC38-204ENST00000546816 CYP26A1O43174 497 aa8.69□□□□□ -1.02
CCDC38-204ENST00000546816 COL19A1Q14993 1142 aa8.69□□□□□ -1.02
CCDC38-204ENST00000546816 GALNT12Q8IXK2 581 aa8.69□□□□□ -1.02
CCDC38-204ENST00000546816 FBXL18Q96ME1 805 aa8.69□□□□□ -1.02
CCDC38-204ENST00000546816 YIPF2Q9BWQ6 316 aa8.69□□□□□ -1.02
CCDC38-204ENST00000546816 CLEC4MQ9H2X3 399 aaPredicted RBP8.69□□□□□ -1.02
CCDC38-204ENST00000546816 ACTL7BQ9Y614 415 aa8.69□□□□□ -1.02
CCDC38-204ENST00000546816 FAM170BA6NMN3 283 aa8.68□□□□□ -1.02
CCDC38-204ENST00000546816 MAOBP27338 520 aa8.68□□□□□ -1.02
CCDC38-204ENST00000546816 GRIA4P48058 902 aa8.68□□□□□ -1.02
CCDC38-204ENST00000546816 SPRED3Q2MJR0 410 aa8.68□□□□□ -1.02
CCDC38-204ENST00000546816 BSDC1Q9NW68 430 aaPredicted RBP8.68□□□□□ -1.02
CCDC38-204ENST00000546816 MTMR7Q9Y216 660 aa8.67□□□□□ -1.02
CCDC38-204ENST00000546816 PPP1R15AO75807 674 aaPredicted RBP8.66□□□□□ -1.02
CCDC38-204ENST00000546816 CYP11A1P05108 521 aa8.66□□□□□ -1.02
CCDC38-204ENST00000546816 NFICP08651 508 aa8.66□□□□□ -1.02
CCDC38-204ENST00000546816 POU4F3Q15319 338 aa8.66□□□□□ -1.02
CCDC38-204ENST00000546816 TRIM56Q9BRZ2 755 aaKnown RBP8.66□□□□□ -1.02
CCDC38-204ENST00000546816 SEMA6CQ9H3T2 930 aa8.66□□□□□ -1.02
CCDC38-204ENST00000546816 GSX1Q9H4S2 264 aaPredicted RBP8.66□□□□□ -1.02
CCDC38-204ENST00000546816 ACSS3Q9H6R3 686 aa8.66□□□□□ -1.02
CCDC38-204ENST00000546816 LIN7BQ9HAP6 207 aa8.66□□□□□ -1.02
CCDC38-204ENST00000546816 ZNF211Q13398 564 aaPredicted RBP8.65□□□□□ -1.02
CCDC38-204ENST00000546816 MAP7Q14244 749 aa8.65□□□□□ -1.02
CCDC38-204ENST00000546816 TP53INP2Q8IXH6 220 aa8.65□□□□□ -1.02
CCDC38-204ENST00000546816 ANO2Q9NQ90 1003 aa8.65□□□□□ -1.02
CCDC38-204ENST00000546816 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.64□□□□□ -1.03
CCDC38-204ENST00000546816 ECEL1O95672 775 aa8.64□□□□□ -1.03
CCDC38-204ENST00000546816 ITGB5P18084 799 aa8.64□□□□□ -1.03
CCDC38-204ENST00000546816 SEZ6L2Q6UXD5 910 aa8.64□□□□□ -1.03
CCDC38-204ENST00000546816 C14orf37Q86TY3 774 aa8.64□□□□□ -1.03
CCDC38-204ENST00000546816 FAM105AQ9NUU6 356 aa8.64□□□□□ -1.03
CCDC38-204ENST00000546816 ZC3H7BQ9UGR2 993 aaKnown RBP8.64□□□□□ -1.03
CCDC38-204ENST00000546816 ARID1BQ8NFD5 2236 aaPredicted RBP8.64□□□□□ -1.03
CCDC38-204ENST00000546816 CARNS1A5YM72 827 aa8.63□□□□□ -1.03
CCDC38-204ENST00000546816 B3GALT4O96024 378 aa8.63□□□□□ -1.03
CCDC38-204ENST00000546816 ABL1P00519 1130 aa8.63□□□□□ -1.03
CCDC38-204ENST00000546816 RAB6AP20340 208 aa8.63□□□□□ -1.03
CCDC38-204ENST00000546816 FZD5Q13467 585 aa8.63□□□□□ -1.03
CCDC38-204ENST00000546816 HP1BP3Q5SSJ5 553 aaPredicted RBP8.63□□□□□ -1.03
CCDC38-204ENST00000546816 KIAA0319Q5VV43 1072 aa8.63□□□□□ -1.03
CCDC38-204ENST00000546816 OGFOD2Q6N063 350 aa8.63□□□□□ -1.03
CCDC38-204ENST00000546816 ZNF765Q7L2R6 523 aa8.63□□□□□ -1.03
CCDC38-204ENST00000546816 DYMQ7RTS9 669 aa8.63□□□□□ -1.03
CCDC38-204ENST00000546816 PAK6Q9NQU5 681 aaPredicted RBP8.63□□□□□ -1.03
CCDC38-204ENST00000546816 CYP27A1Q02318 531 aa8.62□□□□□ -1.03
CCDC38-204ENST00000546816 ECM1Q16610 540 aa8.62□□□□□ -1.03
CCDC38-204ENST00000546816 AKAP4Q5JQC9 854 aa8.62□□□□□ -1.03
CCDC38-204ENST00000546816 DUSP27Q5VZP5 1158 aa8.62□□□□□ -1.03
CCDC38-204ENST00000546816 USPL1Q5W0Q7 1092 aa8.62□□□□□ -1.03
CCDC38-204ENST00000546816 ZFYVE1Q9HBF4 777 aa8.62□□□□□ -1.03
CCDC38-204ENST00000546816 C1GALT1Q9NS00 363 aa8.62□□□□□ -1.03
CCDC38-204ENST00000546816 ITPKAP23677 461 aa8.61□□□□□ -1.03
CCDC38-204ENST00000546816 AGBL5Q8NDL9 886 aa8.61□□□□□ -1.03
CCDC38-204ENST00000546816 FLCNQ8NFG4 579 aa8.61□□□□□ -1.03
CCDC38-204ENST00000546816 ZNF576Q9H609 170 aa8.61□□□□□ -1.03
CCDC38-204ENST00000546816 SYNGAP1Q96PV0 1343 aa8.6□□□□□ -1.03
CCDC38-204ENST00000546816 JUNBP17275 347 aaPredicted RBP8.6□□□□□ -1.03
CCDC38-204ENST00000546816 ASIC4Q96FT7 647 aa8.6□□□□□ -1.03
CCDC38-204ENST00000546816 CORO1BQ9BR76 489 aa8.6□□□□□ -1.03
CCDC38-204ENST00000546816 LRRC4CQ9HCJ2 640 aa8.6□□□□□ -1.03
CCDC38-204ENST00000546816 RAD18Q9NS91 495 aa8.6□□□□□ -1.03
CCDC38-204ENST00000546816 EGFL7Q9UHF1 273 aa8.6□□□□□ -1.03
CCDC38-204ENST00000546816 DYNC1LI2O43237 492 aaPredicted RBP8.59□□□□□ -1.03
CCDC38-204ENST00000546816 ICMTO60725 284 aa8.59□□□□□ -1.03
CCDC38-204ENST00000546816 AOC2O75106 756 aa8.59□□□□□ -1.03
CCDC38-204ENST00000546816 ASPAP45381 313 aa8.59□□□□□ -1.03
CCDC38-204ENST00000546816 WFDC3Q8IUB2 231 aa8.59□□□□□ -1.03
CCDC38-204ENST00000546816 WDR18Q9BV38 432 aa8.59□□□□□ -1.03
CCDC38-204ENST00000546816 AP4E1Q9UPM8 1137 aa8.59□□□□□ -1.03
CCDC38-204ENST00000546816 OGFOD3Q6PK18 319 aa8.58□□□□□ -1.04
CCDC38-204ENST00000546816 POU5F2Q8N7G0 328 aa8.58□□□□□ -1.04
CCDC38-204ENST00000546816 DDX54Q8TDD1 881 aaKnown RBP8.58□□□□□ -1.04
CCDC38-204ENST00000546816 PTPN12Q05209 780 aaKnown RBP8.57□□□□□ -1.04
CCDC38-204ENST00000546816 BCL7CQ8WUZ0 217 aaPredicted RBP8.57□□□□□ -1.04
CCDC38-204ENST00000546816 BRPF3Q9ULD4 1205 aa8.57□□□□□ -1.04
CCDC38-204ENST00000546816 PPP1R9AQ9ULJ8 1098 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms