RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 PI16Q6UXB8 463 aa20.55■□□□□ 0.88
CCDC38-203ENST00000546803 CDC37L1Q7L3B6 337 aa20.55■□□□□ 0.88
CCDC38-203ENST00000546803 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.55■□□□□ 0.88
CCDC38-203ENST00000546803 TEKT1Q969V4 418 aa20.55■□□□□ 0.88
CCDC38-203ENST00000546803 BCL11AQ9H165 835 aa20.55■□□□□ 0.88
CCDC38-203ENST00000546803 ABCF2Q9UG63 623 aa20.55■□□□□ 0.88
CCDC38-203ENST00000546803 PITPNM2Q9BZ72 1349 aa20.54■□□□□ 0.88
CCDC38-203ENST00000546803 SPDYE2BA6NHP3 402 aa20.54■□□□□ 0.88
CCDC38-203ENST00000546803 MYO1BO43795 1136 aa20.54■□□□□ 0.88
CCDC38-203ENST00000546803 SPDYE6P0CI01 402 aa20.54■□□□□ 0.88
CCDC38-203ENST00000546803 HHIPL2Q6UWX4 724 aa20.54■□□□□ 0.88
CCDC38-203ENST00000546803 SMC5Q8IY18 1101 aa20.54■□□□□ 0.88
CCDC38-203ENST00000546803 GGA3Q9NZ52 723 aa20.54■□□□□ 0.88
CCDC38-203ENST00000546803 ADAMTSL1Q8N6G6 1762 aa20.54■□□□□ 0.88
CCDC38-203ENST00000546803 ZNF646O15015 1829 aaPredicted RBP20.53■□□□□ 0.88
CCDC38-203ENST00000546803 ANGEL2Q5VTE6 544 aaKnown RBP20.53■□□□□ 0.88
CCDC38-203ENST00000546803 ERICH6Q7L0X2 663 aa20.53■□□□□ 0.88
CCDC38-203ENST00000546803 SULF1Q8IWU6 871 aa20.53■□□□□ 0.88
CCDC38-203ENST00000546803 PRMT6Q96LA8 375 aaPredicted RBP20.53■□□□□ 0.88
CCDC38-203ENST00000546803 ZDHHC15Q96MV8 337 aa20.53■□□□□ 0.88
CCDC38-203ENST00000546803 SNRKQ9NRH2 765 aa20.53■□□□□ 0.88
CCDC38-203ENST00000546803 IGHDP01880 384 aa20.52■□□□□ 0.88
CCDC38-203ENST00000546803 ATP5JP18859 108 aa20.52■□□□□ 0.88
CCDC38-203ENST00000546803 ZAP70P43403 619 aa20.52■□□□□ 0.88
CCDC38-203ENST00000546803 ANKRD45Q5TZF3 282 aa20.52■□□□□ 0.88
CCDC38-203ENST00000546803 KRT26Q7Z3Y9 468 aa20.52■□□□□ 0.88
CCDC38-203ENST00000546803 DZIP1Q86YF9 867 aaKnown RBP20.52■□□□□ 0.88
CCDC38-203ENST00000546803 SLF2Q8IX21 1173 aa20.52■□□□□ 0.88
CCDC38-203ENST00000546803 GPATCH3Q96I76 525 aa20.52■□□□□ 0.88
CCDC38-203ENST00000546803 ASTN2O75129 1339 aaPredicted RBP20.52■□□□□ 0.87
CCDC38-203ENST00000546803 CYP2E1P05181 493 aaPredicted RBP20.51■□□□□ 0.87
CCDC38-203ENST00000546803 TBC1D9Q6ZT07 1266 aa20.51■□□□□ 0.87
CCDC38-203ENST00000546803 APOBEC3FQ8IUX4 373 aaKnown RBP20.51■□□□□ 0.87
CCDC38-203ENST00000546803 LRP2BPQ9P2M1 347 aa20.51■□□□□ 0.87
CCDC38-203ENST00000546803 PASKQ96RG2 1323 aa20.51■□□□□ 0.87
CCDC38-203ENST00000546803 HSPA6P17066 643 aa20.5■□□□□ 0.87
CCDC38-203ENST00000546803 USP48Q86UV5 1035 aa20.5■□□□□ 0.87
CCDC38-203ENST00000546803 FAM163AQ96GL9 167 aaPredicted RBP20.5■□□□□ 0.87
CCDC38-203ENST00000546803 GLIS2Q9BZE0 524 aaPredicted RBP20.5■□□□□ 0.87
CCDC38-203ENST00000546803 ECHDC1Q9NTX5 307 aa20.5■□□□□ 0.87
CCDC38-203ENST00000546803 PCDHAC2Q9Y5I4 1007 aa20.5■□□□□ 0.87
CCDC38-203ENST00000546803 GSTO1P78417 241 aa20.49■□□□□ 0.87
CCDC38-203ENST00000546803 APOBEC3HQ6NTF7 200 aaKnown RBP20.49■□□□□ 0.87
CCDC38-203ENST00000546803 RAI14Q9P0K7 980 aa20.49■□□□□ 0.87
CCDC38-203ENST00000546803 NEFLP07196 543 aa20.48■□□□□ 0.87
CCDC38-203ENST00000546803 LDHCP07864 332 aa20.48■□□□□ 0.87
CCDC38-203ENST00000546803 APLP1P51693 650 aa20.48■□□□□ 0.87
CCDC38-203ENST00000546803 MECOMQ03112 1051 aa20.48■□□□□ 0.87
CCDC38-203ENST00000546803 TTF1Q15361 905 aaPredicted RBP20.48■□□□□ 0.87
CCDC38-203ENST00000546803 DIXDC1Q155Q3 683 aa20.48■□□□□ 0.87
CCDC38-203ENST00000546803 SPDYE2Q495Y8 402 aa20.48■□□□□ 0.87
CCDC38-203ENST00000546803 DAGLAQ9Y4D2 1042 aa20.48■□□□□ 0.87
CCDC38-203ENST00000546803 TRAF5O00463 557 aa20.47■□□□□ 0.87
CCDC38-203ENST00000546803 TMED8Q6PL24 325 aaPredicted RBP20.47■□□□□ 0.87
CCDC38-203ENST00000546803 NSUN4Q96CB9 384 aaKnown RBP20.47■□□□□ 0.87
CCDC38-203ENST00000546803 HAUS7Q99871 368 aa20.47■□□□□ 0.87
CCDC38-203ENST00000546803 BOLA2Q9H3K6 86 aa20.47■□□□□ 0.87
CCDC38-203ENST00000546803 TDRD3Q9H7E2 651 aaKnown RBP20.47■□□□□ 0.87
CCDC38-203ENST00000546803 PIH1D3Q9NQM4 214 aaKnown RBP20.47■□□□□ 0.87
CCDC38-203ENST00000546803 ZNF70Q9UC06 446 aaPredicted RBP20.47■□□□□ 0.87
CCDC38-203ENST00000546803 GAKO14976 1311 aa20.47■□□□□ 0.87
CCDC38-203ENST00000546803 TTC41PQ6P2S7 1318 aa20.47■□□□□ 0.87
CCDC38-203ENST00000546803 CLRN2A0PK11 232 aa20.46■□□□□ 0.87
CCDC38-203ENST00000546803 ADM5C9JUS6 153 aa20.46■□□□□ 0.87
CCDC38-203ENST00000546803 TNFAIP1Q13829 316 aa20.46■□□□□ 0.87
CCDC38-203ENST00000546803 TMOD2Q9NZR1 351 aa20.46■□□□□ 0.87
CCDC38-203ENST00000546803 ERC2O15083 957 aa20.45■□□□□ 0.86
CCDC38-203ENST00000546803 NUCB1Q02818 461 aa20.45■□□□□ 0.86
CCDC38-203ENST00000546803 MAP3K12Q12852 859 aa20.45■□□□□ 0.86
CCDC38-203ENST00000546803 B4GALNT3Q6L9W6 998 aa20.45■□□□□ 0.86
CCDC38-203ENST00000546803 DNAJC2Q99543 621 aaKnown RBP20.45■□□□□ 0.86
CCDC38-203ENST00000546803 ANTXR1Q9H6X2 564 aa20.45■□□□□ 0.86
CCDC38-203ENST00000546803 VEZTQ9HBM0 779 aa20.45■□□□□ 0.86
CCDC38-203ENST00000546803 PPP2R3BQ9Y5P8 575 aa20.45■□□□□ 0.86
CCDC38-203ENST00000546803 MROH7-TTC4A0A0A0MT08 1334 aa20.45■□□□□ 0.86
CCDC38-203ENST00000546803 AOX1Q06278 1338 aa20.45■□□□□ 0.86
CCDC38-203ENST00000546803 IDH1O75874 414 aaKnown RBP20.44■□□□□ 0.86
CCDC38-203ENST00000546803 MX1P20591 662 aa20.44■□□□□ 0.86
CCDC38-203ENST00000546803 FKBP1CQ5VVH2 108 aa20.44■□□□□ 0.86
CCDC38-203ENST00000546803 NAA16Q6N069 864 aaPredicted RBP20.44■□□□□ 0.86
CCDC38-203ENST00000546803 CHD1LQ86WJ1 897 aa20.44■□□□□ 0.86
CCDC38-203ENST00000546803 ZNF384Q8TF68 577 aa20.44■□□□□ 0.86
CCDC38-203ENST00000546803 DEFB129Q9H1M3 183 aa20.44■□□□□ 0.86
CCDC38-203ENST00000546803 NDUFB9Q9Y6M9 179 aa20.44■□□□□ 0.86
CCDC38-203ENST00000546803 GPR75-ASB3A0A0A6YYF3 556 aa20.43■□□□□ 0.86
CCDC38-203ENST00000546803 TMEM88BA6NKF7 163 aa20.43■□□□□ 0.86
CCDC38-203ENST00000546803 GOLIM4O00461 696 aa20.43■□□□□ 0.86
CCDC38-203ENST00000546803 GLRX3O76003 335 aaKnown RBP20.43■□□□□ 0.86
CCDC38-203ENST00000546803 TNNI2P48788 182 aa20.43■□□□□ 0.86
CCDC38-203ENST00000546803 LNPKQ9C0E8 428 aa20.43■□□□□ 0.86
CCDC38-203ENST00000546803 CREBZFQ9NS37 354 aa20.43■□□□□ 0.86
CCDC38-203ENST00000546803 PAG1Q9NWQ8 432 aa20.43■□□□□ 0.86
CCDC38-203ENST00000546803 CELF2O95319 508 aaKnown RBP20.42■□□□□ 0.86
CCDC38-203ENST00000546803 MAP4K4O95819 1239 aaPredicted RBP20.42■□□□□ 0.86
CCDC38-203ENST00000546803 FMR1Q06787 632 aaKnown RBP eCLIP20.42■□□□□ 0.86
CCDC38-203ENST00000546803 CDC42EP5Q6NZY7 148 aa20.42■□□□□ 0.86
CCDC38-203ENST00000546803 OTUD7AQ8TE49 926 aaPredicted RBP20.42■□□□□ 0.86
CCDC38-203ENST00000546803 CDCA5Q96FF9 252 aa20.42■□□□□ 0.86
CCDC38-203ENST00000546803 USP40Q9NVE5 1235 aa20.42■□□□□ 0.86
CCDC38-203ENST00000546803 STAP2Q9UGK3 403 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms