RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 MECOMQ03112 1051 aa23.18■■□□□ 1.3
SKP2-208ENST00000546211 TTLL6Q8N841 843 aa23.18■■□□□ 1.3
SKP2-208ENST00000546211 NSUN4Q96CB9 384 aaKnown RBP23.18■■□□□ 1.3
SKP2-208ENST00000546211 ARMT1Q9H993 441 aa23.18■■□□□ 1.3
SKP2-208ENST00000546211 APPP05067 770 aa23.17■■□□□ 1.3
SKP2-208ENST00000546211 LDHBP07195 334 aaKnown RBP23.17■■□□□ 1.3
SKP2-208ENST00000546211 PRDX5P30044 214 aa23.17■■□□□ 1.3
SKP2-208ENST00000546211 IMMTQ16891 758 aaKnown RBP23.17■■□□□ 1.3
SKP2-208ENST00000546211 DZIP1Q86YF9 867 aaKnown RBP23.17■■□□□ 1.3
SKP2-208ENST00000546211 C7orf43Q8WVR3 580 aa23.17■■□□□ 1.3
SKP2-208ENST00000546211 MAST2Q6P0Q8 1798 aa23.17■■□□□ 1.3
SKP2-208ENST00000546211 MAGEB6P1A0A0J9YX57 407 aa23.16■■□□□ 1.3
SKP2-208ENST00000546211 G3V3G9 751 aa23.16■■□□□ 1.3
SKP2-208ENST00000546211 FGAP02671 866 aa23.16■■□□□ 1.3
SKP2-208ENST00000546211 HSP90AA1P07900 732 aaKnown RBP23.16■■□□□ 1.3
SKP2-208ENST00000546211 DPEP1P16444 411 aa23.16■■□□□ 1.3
SKP2-208ENST00000546211 DCAF8Q5TAQ9 597 aa23.16■■□□□ 1.3
SKP2-208ENST00000546211 BLOC1S2Q6QNY1 142 aa23.16■■□□□ 1.3
SKP2-208ENST00000546211 RUFY3Q7L099 469 aa23.16■■□□□ 1.3
SKP2-208ENST00000546211 MIGA1Q8NAN2 632 aa23.16■■□□□ 1.3
SKP2-208ENST00000546211 KIF13BQ9NQT8 1826 aa23.16■■□□□ 1.3
SKP2-208ENST00000546211 A0A0G2JLW4 131 aa23.15■■□□□ 1.3
SKP2-208ENST00000546211 PATL2C9JE40 543 aaKnown RBP23.15■■□□□ 1.3
SKP2-208ENST00000546211 TGFB2P61812 414 aa23.15■■□□□ 1.3
SKP2-208ENST00000546211 GRIPAP1Q4V328 841 aa23.15■■□□□ 1.3
SKP2-208ENST00000546211 ADGRA1Q86SQ6 560 aa23.15■■□□□ 1.3
SKP2-208ENST00000546211 LCORLQ8N3X6 602 aa23.15■■□□□ 1.3
SKP2-208ENST00000546211 SPRYD3Q8NCJ5 442 aa23.15■■□□□ 1.3
SKP2-208ENST00000546211 TBC1D22AQ8WUA7 517 aa23.15■■□□□ 1.3
SKP2-208ENST00000546211 TAF6LQ9Y6J9 622 aa23.15■■□□□ 1.3
SKP2-208ENST00000546211 TTLL5Q6EMB2 1281 aa23.14■■□□□ 1.3
SKP2-208ENST00000546211 TTC14Q96N46 770 aa23.14■■□□□ 1.3
SKP2-208ENST00000546211 NEK1Q96PY6 1258 aa23.14■■□□□ 1.3
SKP2-208ENST00000546211 RTFDC1Q9BY42 306 aaPredicted RBP23.14■■□□□ 1.3
SKP2-208ENST00000546211 PDRG1Q9NUG6 133 aa23.14■■□□□ 1.3
SKP2-208ENST00000546211 GSTO1P78417 241 aa23.14■■□□□ 1.29
SKP2-208ENST00000546211 ALX1Q15699 326 aa23.14■■□□□ 1.29
SKP2-208ENST00000546211 SUPT20HQ8NEM7 779 aa23.14■■□□□ 1.29
SKP2-208ENST00000546211 ZNF384Q8TF68 577 aa23.14■■□□□ 1.29
SKP2-208ENST00000546211 NACAP1Q9BZK3 213 aa23.14■■□□□ 1.29
SKP2-208ENST00000546211 SLC4A4Q9Y6R1 1079 aa23.14■■□□□ 1.29
SKP2-208ENST00000546211 FAM205AQ6ZU69 1335 aa23.14■■□□□ 1.29
SKP2-208ENST00000546211 PSDA5PKW4 1024 aaPredicted RBP23.13■■□□□ 1.29
SKP2-208ENST00000546211 ZNF213O14771 459 aa23.13■■□□□ 1.29
SKP2-208ENST00000546211 C21orf2O43822 256 aa23.13■■□□□ 1.29
SKP2-208ENST00000546211 CPA1P15085 419 aa23.13■■□□□ 1.29
SKP2-208ENST00000546211 SLKQ9H2G2 1235 aaPredicted RBP23.13■■□□□ 1.29
SKP2-208ENST00000546211 ZMYM6O95789 1325 aa23.13■■□□□ 1.29
SKP2-208ENST00000546211 HMGB1P09429 215 aaKnown RBP23.12■■□□□ 1.29
SKP2-208ENST00000546211 KCNA3P22001 575 aa23.12■■□□□ 1.29
SKP2-208ENST00000546211 DOK7Q18PE1 504 aa23.12■■□□□ 1.29
SKP2-208ENST00000546211 CCDC88AQ3V6T2 1871 aa23.12■■□□□ 1.29
SKP2-208ENST00000546211 RIOK1Q9BRS2 568 aaKnown RBP23.12■■□□□ 1.29
SKP2-208ENST00000546211 NAPBQ9H115 298 aa23.12■■□□□ 1.29
SKP2-208ENST00000546211 RPS6KB1P23443 525 aa23.11■■□□□ 1.29
SKP2-208ENST00000546211 AK2P54819 239 aa23.11■■□□□ 1.29
SKP2-208ENST00000546211 GTF2IP78347 998 aa23.11■■□□□ 1.29
SKP2-208ENST00000546211 CCDC93Q567U6 631 aa23.11■■□□□ 1.29
SKP2-208ENST00000546211 MFSD14BQ5SR56 506 aa23.11■■□□□ 1.29
SKP2-208ENST00000546211 IFNL3Q8IZI9 196 aa23.11■■□□□ 1.29
SKP2-208ENST00000546211 GSG1L2A8MUP6 293 aa23.1■■□□□ 1.29
SKP2-208ENST00000546211 E7EWF7 191 aa23.1■■□□□ 1.29
SKP2-208ENST00000546211 LDHCP07864 332 aa23.1■■□□□ 1.29
SKP2-208ENST00000546211 NOL8Q76FK4 1167 aaKnown RBP23.1■■□□□ 1.29
SKP2-208ENST00000546211 PODNQ7Z5L7 613 aa23.1■■□□□ 1.29
SKP2-208ENST00000546211 RTKN2Q8IZC4 609 aa23.1■■□□□ 1.29
SKP2-208ENST00000546211 PIM2Q9P1W9 311 aa23.1■■□□□ 1.29
SKP2-208ENST00000546211 SNED1Q8TER0 1413 aa23.1■■□□□ 1.29
SKP2-208ENST00000546211 PRKAB2O43741 272 aa23.1■■□□□ 1.29
SKP2-208ENST00000546211 HAND2P61296 217 aa23.1■■□□□ 1.29
SKP2-208ENST00000546211 STOX1Q6ZVD7 989 aa23.1■■□□□ 1.29
SKP2-208ENST00000546211 FBXW7Q969H0 707 aa23.1■■□□□ 1.29
SKP2-208ENST00000546211 TMX3Q96JJ7 454 aa23.1■■□□□ 1.29
SKP2-208ENST00000546211 TDO2P48775 406 aa23.09■■□□□ 1.29
SKP2-208ENST00000546211 DYNLL1P63167 89 aaKnown RBP23.09■■□□□ 1.29
SKP2-208ENST00000546211 SOGA3Q5TF21 947 aa23.09■■□□□ 1.29
SKP2-208ENST00000546211 SGIP1Q9BQI5 828 aa23.09■■□□□ 1.29
SKP2-208ENST00000546211 ALDH8A1Q9H2A2 487 aaPredicted RBP23.09■■□□□ 1.29
SKP2-208ENST00000546211 EPB41L4AQ9HCS5 686 aaPredicted RBP23.09■■□□□ 1.29
SKP2-208ENST00000546211 KIAA1551Q9HCM1 1747 aa23.08■■□□□ 1.29
SKP2-208ENST00000546211 ANKRD1Q15327 319 aa23.08■■□□□ 1.29
SKP2-208ENST00000546211 SLF2Q8IX21 1173 aa23.08■■□□□ 1.29
SKP2-208ENST00000546211 NOL10Q9BSC4 688 aaKnown RBP23.08■■□□□ 1.29
SKP2-208ENST00000546211 AATFQ9NY61 560 aaKnown RBP eCLIP23.08■■□□□ 1.29
SKP2-208ENST00000546211 PPP1R1BQ9UD71 204 aaPredicted RBP23.08■■□□□ 1.29
SKP2-208ENST00000546211 LIMCH1Q9UPQ0 1083 aa23.08■■□□□ 1.29
SKP2-208ENST00000546211 SUGT1Q9Y2Z0 365 aa23.08■■□□□ 1.29
SKP2-208ENST00000546211 GRIK5Q16478 980 aa23.07■■□□□ 1.28
SKP2-208ENST00000546211 CRNKL1Q9BZJ0 848 aaKnown RBP23.07■■□□□ 1.28
SKP2-208ENST00000546211 DBNDD1Q9H9R9 158 aa23.07■■□□□ 1.28
SKP2-208ENST00000546211 BAG3O95817 575 aa23.06■■□□□ 1.28
SKP2-208ENST00000546211 KIAA2012Q0VF49 1180 aa23.06■■□□□ 1.28
SKP2-208ENST00000546211 CD2APQ9Y5K6 639 aa23.06■■□□□ 1.28
SKP2-208ENST00000546211 MROH7-TTC4A0A0A0MT08 1334 aa23.06■■□□□ 1.28
SKP2-208ENST00000546211 ECE2O60344 883 aa23.06■■□□□ 1.28
SKP2-208ENST00000546211 AOC3Q16853 763 aa23.06■■□□□ 1.28
SKP2-208ENST00000546211 DHX32Q7L7V1 743 aaKnown RBP23.06■■□□□ 1.28
SKP2-208ENST00000546211 CERS3Q8IU89 383 aa23.06■■□□□ 1.28
SKP2-208ENST00000546211 KLHL34Q8N239 644 aa23.06■■□□□ 1.28
SKP2-208ENST00000546211 SDR42E1Q8WUS8 393 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms