RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 PPP2R2CQ9Y2T4 447 aa16.38■□□□□ 0.21
SRP54-202ENST00000546080 MAST3O60307 1309 aa16.38■□□□□ 0.21
SRP54-202ENST00000546080 SASH3O75995 380 aa16.38■□□□□ 0.21
SRP54-202ENST00000546080 GOLGA8FQ08AF8 430 aa16.38■□□□□ 0.21
SRP54-202ENST00000546080 GOLGA8DPQ0D2H9 430 aa16.38■□□□□ 0.21
SRP54-202ENST00000546080 FBXL16Q8N461 479 aa16.38■□□□□ 0.21
SRP54-202ENST00000546080 SMARCE1Q969G3 411 aa16.38■□□□□ 0.21
SRP54-202ENST00000546080 TUBE1Q9UJT0 475 aa16.38■□□□□ 0.21
SRP54-202ENST00000546080 GOLGA6L9A6NEM1 432 aa16.37■□□□□ 0.21
SRP54-202ENST00000546080 GOLGA8BA8MQT2 603 aa16.37■□□□□ 0.21
SRP54-202ENST00000546080 ST5P78524 1137 aa16.37■□□□□ 0.21
SRP54-202ENST00000546080 SMC1AQ14683 1233 aaKnown RBP16.37■□□□□ 0.21
SRP54-202ENST00000546080 MUM1L1Q5H9M0 696 aa16.37■□□□□ 0.21
SRP54-202ENST00000546080 EPC1Q9H2F5 836 aa16.37■□□□□ 0.21
SRP54-202ENST00000546080 GPHNQ9NQX3 736 aaPredicted RBP16.37■□□□□ 0.21
SRP54-202ENST00000546080 KLF18A0A0U1RQI7 1052 aa16.37■□□□□ 0.21
SRP54-202ENST00000546080 KIF28PB7ZC32 967 aa16.37■□□□□ 0.21
SRP54-202ENST00000546080 TMEM232C9JQI7 657 aa16.37■□□□□ 0.21
SRP54-202ENST00000546080 CPLX1O14810 134 aa16.37■□□□□ 0.21
SRP54-202ENST00000546080 GNG11P61952 73 aa16.37■□□□□ 0.21
SRP54-202ENST00000546080 PPP2R3AQ06190 1150 aa16.37■□□□□ 0.21
SRP54-202ENST00000546080 OLFM4Q6UX06 510 aa16.37■□□□□ 0.21
SRP54-202ENST00000546080 KRBA2Q6ZNG9 492 aa16.37■□□□□ 0.21
SRP54-202ENST00000546080 ANKRD13DQ6ZTN6 518 aa16.37■□□□□ 0.21
SRP54-202ENST00000546080 CCDC34Q96HJ3 373 aa16.37■□□□□ 0.21
SRP54-202ENST00000546080 ARFGAP3Q9NP61 516 aa16.37■□□□□ 0.21
SRP54-202ENST00000546080 C5P01031 1676 aa16.36■□□□□ 0.21
SRP54-202ENST00000546080 MYO1BO43795 1136 aa16.36■□□□□ 0.21
SRP54-202ENST00000546080 WDHD1O75717 1129 aaPredicted RBP16.36■□□□□ 0.21
SRP54-202ENST00000546080 MARCKSP29966 332 aaPredicted RBP16.36■□□□□ 0.21
SRP54-202ENST00000546080 MAP3K9P80192 1104 aa16.36■□□□□ 0.21
SRP54-202ENST00000546080 KIF23Q02241 960 aaPredicted RBP16.36■□□□□ 0.21
SRP54-202ENST00000546080 SLC39A6Q13433 755 aa16.36■□□□□ 0.21
SRP54-202ENST00000546080 TTLL5Q6EMB2 1281 aa16.36■□□□□ 0.21
SRP54-202ENST00000546080 TICAM2Q86XR7 235 aa16.36■□□□□ 0.21
SRP54-202ENST00000546080 ARHGAP23Q9P227 1491 aa16.36■□□□□ 0.21
SRP54-202ENST00000546080 PHRF1Q9P1Y6 1649 aaKnown RBP16.36■□□□□ 0.21
SRP54-202ENST00000546080 KCNA6P17658 529 aa16.36■□□□□ 0.21
SRP54-202ENST00000546080 ZNF790Q6PG37 636 aa16.36■□□□□ 0.21
SRP54-202ENST00000546080 TMEM139Q8IV31 216 aa16.36■□□□□ 0.21
SRP54-202ENST00000546080 ZCCHC17Q9NP64 241 aaKnown RBP16.36■□□□□ 0.21
SRP54-202ENST00000546080 GJB4Q9NTQ9 266 aa16.36■□□□□ 0.21
SRP54-202ENST00000546080 MRFAP1Q9Y605 127 aa16.36■□□□□ 0.21
SRP54-202ENST00000546080 RNF113AO15541 343 aaKnown RBP16.35■□□□□ 0.21
SRP54-202ENST00000546080 SLC39A14Q15043 492 aa16.35■□□□□ 0.21
SRP54-202ENST00000546080 BAG1Q99933 345 aaPredicted RBP16.35■□□□□ 0.21
SRP54-202ENST00000546080 FEZ2Q9UHY8 353 aaPredicted RBP16.35■□□□□ 0.21
SRP54-202ENST00000546080 AFDNP55196 1824 aaKnown RBP16.34■□□□□ 0.21
SRP54-202ENST00000546080 A0A087WZG4 1122 aa16.34■□□□□ 0.21
SRP54-202ENST00000546080 M0R2C6 588 aa16.34■□□□□ 0.21
SRP54-202ENST00000546080 PNOCQ13519 176 aa16.34■□□□□ 0.21
SRP54-202ENST00000546080 PTPN21Q16825 1174 aa16.34■□□□□ 0.21
SRP54-202ENST00000546080 AK7Q96M32 723 aa16.34■□□□□ 0.21
SRP54-202ENST00000546080 WDR24Q96S15 920 aa16.34■□□□□ 0.21
SRP54-202ENST00000546080 PRC1O43663 620 aa16.34■□□□□ 0.21
SRP54-202ENST00000546080 RSRC2Q7L4I2 434 aaKnown RBP16.34■□□□□ 0.21
SRP54-202ENST00000546080 RAB11FIP4Q86YS3 637 aa16.34■□□□□ 0.21
SRP54-202ENST00000546080 PDILTQ8N807 584 aa16.34■□□□□ 0.21
SRP54-202ENST00000546080 JMYQ8N9B5 988 aa16.34■□□□□ 0.21
SRP54-202ENST00000546080 ANKRD24Q8TF21 1146 aa16.34■□□□□ 0.21
SRP54-202ENST00000546080 GOLGA1Q92805 767 aa16.34■□□□□ 0.21
SRP54-202ENST00000546080 TRIM34Q9BYJ4 488 aa16.34■□□□□ 0.21
SRP54-202ENST00000546080 FANCLQ9NW38 375 aa16.34■□□□□ 0.21
SRP54-202ENST00000546080 HPSEQ9Y251 543 aa16.34■□□□□ 0.21
SRP54-202ENST00000546080 IFIT1P09914 478 aaKnown RBP16.33■□□□□ 0.2
SRP54-202ENST00000546080 HAND2P61296 217 aa16.33■□□□□ 0.2
SRP54-202ENST00000546080 IMMTQ16891 758 aaKnown RBP16.33■□□□□ 0.2
SRP54-202ENST00000546080 LMBR1LQ6UX01 489 aa16.33■□□□□ 0.2
SRP54-202ENST00000546080 RABGGTAQ92696 567 aa16.33■□□□□ 0.2
SRP54-202ENST00000546080 PARD6BQ9BYG5 372 aa16.33■□□□□ 0.2
SRP54-202ENST00000546080 HPS5Q9UPZ3 1129 aa16.33■□□□□ 0.2
SRP54-202ENST00000546080 ATP5J2-PTCD1G3V325 749 aa16.33■□□□□ 0.2
SRP54-202ENST00000546080 PTCD1O75127 700 aaKnown RBP16.33■□□□□ 0.2
SRP54-202ENST00000546080 TIMM10P62072 90 aa16.33■□□□□ 0.2
SRP54-202ENST00000546080 ZSCAN26Q16670 478 aa16.33■□□□□ 0.2
SRP54-202ENST00000546080 JAKMIP3Q5VZ66 844 aa16.33■□□□□ 0.2
SRP54-202ENST00000546080 CWC15Q9P013 229 aaKnown RBP16.33■□□□□ 0.2
SRP54-202ENST00000546080 STX10O60499 249 aa16.32■□□□□ 0.2
SRP54-202ENST00000546080 PPP6R2O75170 966 aa16.32■□□□□ 0.2
SRP54-202ENST00000546080 CEBPAP49715 358 aaPredicted RBP16.32■□□□□ 0.2
SRP54-202ENST00000546080 SHC4Q6S5L8 630 aa16.32■□□□□ 0.2
SRP54-202ENST00000546080 FUT8Q9BYC5 575 aa16.32■□□□□ 0.2
SRP54-202ENST00000546080 C19orf44Q9H6X5 657 aa16.32■□□□□ 0.2
SRP54-202ENST00000546080 INTS13Q9NVM9 706 aa16.32■□□□□ 0.2
SRP54-202ENST00000546080 TOGARAM2Q6ZUX3 1019 aa16.31■□□□□ 0.2
SRP54-202ENST00000546080 KIFC2Q96AC6 838 aa16.31■□□□□ 0.2
SRP54-202ENST00000546080 GPR108Q9NPR9 543 aa16.31■□□□□ 0.2
SRP54-202ENST00000546080 ADAMTS7Q9UKP4 1686 aa16.31■□□□□ 0.2
SRP54-202ENST00000546080 PIP4K2AP48426 406 aaPredicted RBP16.31■□□□□ 0.2
SRP54-202ENST00000546080 TBX2Q13207 712 aaPredicted RBP16.31■□□□□ 0.2
SRP54-202ENST00000546080 RALYLQ86SE5 291 aaKnown RBP16.31■□□□□ 0.2
SRP54-202ENST00000546080 MB21D2Q8IYB1 491 aaPredicted RBP16.31■□□□□ 0.2
SRP54-202ENST00000546080 CCDC191Q8NCU4 936 aa16.31■□□□□ 0.2
SRP54-202ENST00000546080 CNNM3Q8NE01 707 aa16.31■□□□□ 0.2
SRP54-202ENST00000546080 OSBP2Q969R2 916 aa16.31■□□□□ 0.2
SRP54-202ENST00000546080 DHX58Q96C10 678 aa16.31■□□□□ 0.2
SRP54-202ENST00000546080 LMTK3Q96Q04 1460 aa16.31■□□□□ 0.2
SRP54-202ENST00000546080 TXLNAP40222 546 aa16.3■□□□□ 0.2
SRP54-202ENST00000546080 MAPK8IP2Q13387 824 aaPredicted RBP16.3■□□□□ 0.2
SRP54-202ENST00000546080 LONRF2Q1L5Z9 754 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms