RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 SYCP1Q15431 976 aa17.8■□□□□ 0.44
CNN3-207ENST00000545882 LRRFIP1Q32MZ4 808 aaKnown RBP17.8■□□□□ 0.44
CNN3-207ENST00000545882 FBXW7Q969H0 707 aa17.8■□□□□ 0.44
CNN3-207ENST00000545882 FAM89AQ96GI7 184 aa17.8■□□□□ 0.44
CNN3-207ENST00000545882 DENND2AQ9ULE3 1009 aa17.8■□□□□ 0.44
CNN3-207ENST00000545882 PAXBP1Q9Y5B6 917 aa17.8■□□□□ 0.44
CNN3-207ENST00000545882 ABCC12Q96J65 1359 aa17.79■□□□□ 0.44
CNN3-207ENST00000545882 GPAA1O43292 621 aa17.79■□□□□ 0.44
CNN3-207ENST00000545882 PCCAP05165 728 aaPredicted RBP17.79■□□□□ 0.44
CNN3-207ENST00000545882 SKILP12757 684 aa17.79■□□□□ 0.44
CNN3-207ENST00000545882 DPCR1Q3MIW9 517 aa17.79■□□□□ 0.44
CNN3-207ENST00000545882 NYAP1Q6ZVC0 841 aa17.79■□□□□ 0.44
CNN3-207ENST00000545882 NCOA7Q8NI08 942 aa17.79■□□□□ 0.44
CNN3-207ENST00000545882 SDF4Q9BRK5 362 aa17.79■□□□□ 0.44
CNN3-207ENST00000545882 PRDM10Q9NQV6 1147 aa17.79■□□□□ 0.44
CNN3-207ENST00000545882 KIAA1468Q9P260 1216 aa17.79■□□□□ 0.44
CNN3-207ENST00000545882 SPTLC2O15270 562 aa17.78■□□□□ 0.44
CNN3-207ENST00000545882 CBX1P83916 185 aa17.78■□□□□ 0.44
CNN3-207ENST00000545882 NAA30Q147X3 362 aaPredicted RBP17.78■□□□□ 0.44
CNN3-207ENST00000545882 AXDND1Q5T1B0 1012 aaPredicted RBP17.78■□□□□ 0.44
CNN3-207ENST00000545882 FILIP1Q7Z7B0 1213 aa17.78■□□□□ 0.44
CNN3-207ENST00000545882 SYNE4Q8N205 404 aa17.78■□□□□ 0.44
CNN3-207ENST00000545882 KCNG4Q8TDN1 519 aa17.78■□□□□ 0.44
CNN3-207ENST00000545882 WDR19Q8NEZ3 1342 aa17.78■□□□□ 0.44
CNN3-207ENST00000545882 ANKRD36CQ5JPF3 1778 aa17.78■□□□□ 0.44
CNN3-207ENST00000545882 MCAMP43121 646 aa17.78■□□□□ 0.44
CNN3-207ENST00000545882 KIF23Q02241 960 aaPredicted RBP17.78■□□□□ 0.44
CNN3-207ENST00000545882 CEP135Q66GS9 1140 aa17.78■□□□□ 0.44
CNN3-207ENST00000545882 BRAPQ7Z569 592 aa17.78■□□□□ 0.44
CNN3-207ENST00000545882 BPIFA3Q9BQP9 254 aa17.78■□□□□ 0.44
CNN3-207ENST00000545882 RIPOR2Q9Y4F9 1068 aa17.78■□□□□ 0.44
CNN3-207ENST00000545882 CHD4Q14839 1912 aa17.78■□□□□ 0.44
CNN3-207ENST00000545882 DHX16O60231 1041 aaKnown RBP17.77■□□□□ 0.44
CNN3-207ENST00000545882 U2AF2P26368 475 aaKnown RBP eCLIP17.77■□□□□ 0.44
CNN3-207ENST00000545882 NAT10Q9H0A0 1025 aaKnown RBP17.77■□□□□ 0.44
CNN3-207ENST00000545882 STRN4Q9NRL3 753 aa17.77■□□□□ 0.44
CNN3-207ENST00000545882 KCND1Q9NSA2 647 aa17.77■□□□□ 0.44
CNN3-207ENST00000545882 ITGB4P16144 1822 aa17.76■□□□□ 0.43
CNN3-207ENST00000545882 KDM4FA0A1W2PPD8 638 aa17.76■□□□□ 0.43
CNN3-207ENST00000545882 ZNF213O14771 459 aa17.76■□□□□ 0.43
CNN3-207ENST00000545882 SF3A1Q15459 793 aaKnown RBP17.76■□□□□ 0.43
CNN3-207ENST00000545882 ANO1Q5XXA6 986 aa17.76■□□□□ 0.43
CNN3-207ENST00000545882 OSBPL5Q9H0X9 879 aaPredicted RBP17.76■□□□□ 0.43
CNN3-207ENST00000545882 WDHD1O75717 1129 aaPredicted RBP17.76■□□□□ 0.43
CNN3-207ENST00000545882 ZNF202O95125 648 aa17.76■□□□□ 0.43
CNN3-207ENST00000545882 ZSCAN20P17040 1043 aaPredicted RBP17.76■□□□□ 0.43
CNN3-207ENST00000545882 CYB5R4Q7L1T6 521 aa17.76■□□□□ 0.43
CNN3-207ENST00000545882 CCAR2Q8N163 923 aaKnown RBP17.76■□□□□ 0.43
CNN3-207ENST00000545882 ZBTB38Q8NAP3 1195 aaPredicted RBP17.76■□□□□ 0.43
CNN3-207ENST00000545882 CCDC112Q8NEF3 446 aa17.76■□□□□ 0.43
CNN3-207ENST00000545882 MROH7-TTC4A0A0A0MT08 1334 aa17.76■□□□□ 0.43
CNN3-207ENST00000545882 ADD2P35612 726 aa17.75■□□□□ 0.43
CNN3-207ENST00000545882 NLRP12P59046 1061 aa17.75■□□□□ 0.43
CNN3-207ENST00000545882 IFIT5Q13325 482 aaKnown RBP17.75■□□□□ 0.43
CNN3-207ENST00000545882 NCAPHQ15003 741 aa17.75■□□□□ 0.43
CNN3-207ENST00000545882 RALYLQ86SE5 291 aaKnown RBP17.75■□□□□ 0.43
CNN3-207ENST00000545882 TBC1D10CQ8IV04 446 aa17.75■□□□□ 0.43
CNN3-207ENST00000545882 AIFM3Q96NN9 605 aa17.75■□□□□ 0.43
CNN3-207ENST00000545882 ZNF330Q9Y3S2 320 aaPredicted RBP17.75■□□□□ 0.43
CNN3-207ENST00000545882 ATRNO75882 1429 aa17.75■□□□□ 0.43
CNN3-207ENST00000545882 NUP98P52948 1817 aa17.75■□□□□ 0.43
CNN3-207ENST00000545882 SPDYE4A6NLX3 237 aa17.74■□□□□ 0.43
CNN3-207ENST00000545882 CPLX1O14810 134 aa17.74■□□□□ 0.43
CNN3-207ENST00000545882 DNAJC10Q8IXB1 793 aa17.74■□□□□ 0.43
CNN3-207ENST00000545882 XPO4Q9C0E2 1151 aaKnown RBP17.74■□□□□ 0.43
CNN3-207ENST00000545882 DISP2A7MBM2 1401 aa17.74■□□□□ 0.43
CNN3-207ENST00000545882 PLCH1Q4KWH8 1693 aa17.74■□□□□ 0.43
CNN3-207ENST00000545882 BIN1O00499 593 aa17.74■□□□□ 0.43
CNN3-207ENST00000545882 SLC3A2P08195 630 aaKnown RBP17.74■□□□□ 0.43
CNN3-207ENST00000545882 PFKFB1P16118 471 aa17.74■□□□□ 0.43
CNN3-207ENST00000545882 CMA1P23946 247 aa17.74■□□□□ 0.43
CNN3-207ENST00000545882 SLC39A14Q15043 492 aa17.74■□□□□ 0.43
CNN3-207ENST00000545882 PTPN14Q15678 1187 aa17.74■□□□□ 0.43
CNN3-207ENST00000545882 TAF7LQ5H9L4 462 aa17.74■□□□□ 0.43
CNN3-207ENST00000545882 RGS22Q8NE09 1264 aa17.74■□□□□ 0.43
CNN3-207ENST00000545882 ZNF592Q92610 1267 aa17.74■□□□□ 0.43
CNN3-207ENST00000545882 SENP2Q9HC62 589 aa17.74■□□□□ 0.43
CNN3-207ENST00000545882 PIH1D3Q9NQM4 214 aaKnown RBP17.74■□□□□ 0.43
CNN3-207ENST00000545882 LRP6O75581 1613 aa17.73■□□□□ 0.43
CNN3-207ENST00000545882 ZMYM6O95789 1325 aa17.73■□□□□ 0.43
CNN3-207ENST00000545882 CDHR2Q9BYE9 1310 aa17.73■□□□□ 0.43
CNN3-207ENST00000545882 EVA1CP58658 441 aa17.73■□□□□ 0.43
CNN3-207ENST00000545882 SYNE3Q6ZMZ3 975 aa17.73■□□□□ 0.43
CNN3-207ENST00000545882 VGLL2Q8N8G2 317 aa17.73■□□□□ 0.43
CNN3-207ENST00000545882 TTLL11Q8NHH1 800 aa17.73■□□□□ 0.43
CNN3-207ENST00000545882 GREM2Q9H772 168 aa17.73■□□□□ 0.43
CNN3-207ENST00000545882 TRMT1Q9NXH9 659 aaKnown RBP17.73■□□□□ 0.43
CNN3-207ENST00000545882 TMOD3Q9NYL9 352 aa17.73■□□□□ 0.43
CNN3-207ENST00000545882 IMPACTQ9P2X3 320 aa17.73■□□□□ 0.43
CNN3-207ENST00000545882 SH2B2O14492 632 aaPredicted RBP17.72■□□□□ 0.43
CNN3-207ENST00000545882 CDC27P30260 824 aa17.72■□□□□ 0.43
CNN3-207ENST00000545882 GSDMDP57764 484 aa17.72■□□□□ 0.43
CNN3-207ENST00000545882 HLFQ16534 295 aa17.72■□□□□ 0.43
CNN3-207ENST00000545882 METTL24Q5JXM2 366 aa17.72■□□□□ 0.43
CNN3-207ENST00000545882 ARMCX5Q6P1M9 558 aa17.72■□□□□ 0.43
CNN3-207ENST00000545882 ZNF512BQ96KM6 892 aaPredicted RBP17.72■□□□□ 0.43
CNN3-207ENST00000545882 HSD3B7Q9H2F3 369 aa17.72■□□□□ 0.43
CNN3-207ENST00000545882 IFNKQ9P0W0 207 aa17.72■□□□□ 0.43
CNN3-207ENST00000545882 ANGEL1Q9UNK9 670 aaKnown RBP17.72■□□□□ 0.43
CNN3-207ENST00000545882 DOCK2Q92608 1830 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 220.6 ms