RNA–Protein interactions for RNA: ENST00000545831.5

NPIPA1-208, Transcript of nuclear pore complex interacting protein family member A1, human

TSL 3

Gene NPIPA1, Length 553 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPA1-208	ENST00000545831	TCRBV5S4A2T	A0A5A2	114 aa		12.04	□□□□□ -0.48
NPIPA1-208	ENST00000545831	NFKBIE	O00221	500 aa		12.04	□□□□□ -0.48
NPIPA1-208	ENST00000545831	CHGB	P05060	677 aa		12.04	□□□□□ -0.48
NPIPA1-208	ENST00000545831	SLFNL1	Q499Z3	407 aa		12.04	□□□□□ -0.48
NPIPA1-208	ENST00000545831	ARHGAP27	Q6ZUM4	889 aa		12.04	□□□□□ -0.48
NPIPA1-208	ENST00000545831	ZNF589	Q86UQ0	364 aa	Predicted RBP	12.04	□□□□□ -0.48
NPIPA1-208	ENST00000545831	NSUN4	Q96CB9	384 aa	Known RBP	12.04	□□□□□ -0.48
NPIPA1-208	ENST00000545831	NOL10	Q9BSC4	688 aa	Known RBP	12.04	□□□□□ -0.48
NPIPA1-208	ENST00000545831	PUS7L	Q9H0K6	701 aa	Known RBP	12.04	□□□□□ -0.48
NPIPA1-208	ENST00000545831	IL25	Q9H293	177 aa		12.04	□□□□□ -0.48
NPIPA1-208	ENST00000545831	ZNRF3	Q9ULT6	936 aa		12.04	□□□□□ -0.48
NPIPA1-208	ENST00000545831	MAST3	O60307	1309 aa		12.04	□□□□□ -0.48
NPIPA1-208	ENST00000545831	MAGEB6P1	A0A0J9YX57	407 aa		12.03	□□□□□ -0.48
NPIPA1-208	ENST00000545831		M0R2C6	588 aa		12.03	□□□□□ -0.48
NPIPA1-208	ENST00000545831	GPAA1	O43292	621 aa		12.03	□□□□□ -0.48
NPIPA1-208	ENST00000545831	GNAT2	P19087	354 aa		12.03	□□□□□ -0.48
NPIPA1-208	ENST00000545831	CCDC129	Q6ZRS4	1044 aa		12.03	□□□□□ -0.48
NPIPA1-208	ENST00000545831	TBC1D32	Q96NH3	1257 aa		12.03	□□□□□ -0.48
NPIPA1-208	ENST00000545831	DSCC1	Q9BVC3	393 aa		12.03	□□□□□ -0.48
NPIPA1-208	ENST00000545831	LSG1	Q9H089	658 aa	Known RBP	12.03	□□□□□ -0.48
NPIPA1-208	ENST00000545831	DOCK2	Q92608	1830 aa		12.02	□□□□□ -0.48
NPIPA1-208	ENST00000545831	BAG3	O95817	575 aa		12.02	□□□□□ -0.49
NPIPA1-208	ENST00000545831	RBM25	P49756	843 aa	Known RBP	12.02	□□□□□ -0.49
NPIPA1-208	ENST00000545831	RASSF7	Q02833	373 aa		12.02	□□□□□ -0.49
NPIPA1-208	ENST00000545831	PTH1R	Q03431	593 aa		12.02	□□□□□ -0.49
NPIPA1-208	ENST00000545831	DACT2	Q5SW24	774 aa		12.02	□□□□□ -0.49
NPIPA1-208	ENST00000545831	CERS3	Q8IU89	383 aa		12.02	□□□□□ -0.49
NPIPA1-208	ENST00000545831	MAP4K1	Q92918	833 aa		12.02	□□□□□ -0.49
NPIPA1-208	ENST00000545831	RBM19	Q9Y4C8	960 aa	Known RBP	12.02	□□□□□ -0.49
NPIPA1-208	ENST00000545831		U3KPZ7	1027 aa	Predicted RBP	12.02	□□□□□ -0.49
NPIPA1-208	ENST00000545831	MYO3B	Q8WXR4	1341 aa		12.02	□□□□□ -0.49
NPIPA1-208	ENST00000545831	ARFGEF1	Q9Y6D6	1849 aa		12.02	□□□□□ -0.49
NPIPA1-208	ENST00000545831	YDJC	A8MPS7	323 aa		12.01	□□□□□ -0.49
NPIPA1-208	ENST00000545831	MBD4	O95243	580 aa		12.01	□□□□□ -0.49
NPIPA1-208	ENST00000545831	HSPD1	P10809	573 aa	Known RBP	12.01	□□□□□ -0.49
NPIPA1-208	ENST00000545831	TNIP1	Q15025	636 aa		12.01	□□□□□ -0.49
NPIPA1-208	ENST00000545831	RNF20	Q5VTR2	975 aa		12.01	□□□□□ -0.49
NPIPA1-208	ENST00000545831	MIGA1	Q8NAN2	632 aa		12.01	□□□□□ -0.49
NPIPA1-208	ENST00000545831	FAM163A	Q96GL9	167 aa	Predicted RBP	12.01	□□□□□ -0.49
NPIPA1-208	ENST00000545831	STRBP	Q96SI9	672 aa	Known RBP	12.01	□□□□□ -0.49
NPIPA1-208	ENST00000545831	KCNQ5	Q9NR82	932 aa		12.01	□□□□□ -0.49
NPIPA1-208	ENST00000545831	CTNNA3	Q9UI47	895 aa		12.01	□□□□□ -0.49
NPIPA1-208	ENST00000545831	TTF2	Q9UNY4	1162 aa	Known RBP	12.01	□□□□□ -0.49
NPIPA1-208	ENST00000545831	FER1L6	Q2WGJ9	1857 aa		12.01	□□□□□ -0.49
NPIPA1-208	ENST00000545831	MYH7	P12883	1935 aa		12.01	□□□□□ -0.49
NPIPA1-208	ENST00000545831	PATL2	C9JE40	543 aa	Known RBP	12	□□□□□ -0.49
NPIPA1-208	ENST00000545831		F8W031	263 aa	Predicted RBP	12	□□□□□ -0.49
NPIPA1-208	ENST00000545831	RAD17	O75943	681 aa		12	□□□□□ -0.49
NPIPA1-208	ENST00000545831	APP	P05067	770 aa		12	□□□□□ -0.49
NPIPA1-208	ENST00000545831	VIL1	P09327	827 aa	Known RBP	12	□□□□□ -0.49
NPIPA1-208	ENST00000545831	PLCG2	P16885	1265 aa		12	□□□□□ -0.49
NPIPA1-208	ENST00000545831	ZKSCAN1	P17029	563 aa	Predicted RBP	12	□□□□□ -0.49
NPIPA1-208	ENST00000545831	HSPA4	P34932	840 aa		12	□□□□□ -0.49
NPIPA1-208	ENST00000545831	EIF6	P56537	245 aa	Known RBP	12	□□□□□ -0.49
NPIPA1-208	ENST00000545831	HDLBP	Q00341	1268 aa	Known RBP	12	□□□□□ -0.49
NPIPA1-208	ENST00000545831	GRIK5	Q16478	980 aa		12	□□□□□ -0.49
NPIPA1-208	ENST00000545831	GPR162	Q16538	588 aa		12	□□□□□ -0.49
NPIPA1-208	ENST00000545831	CIAPIN1	Q6FI81	312 aa		12	□□□□□ -0.49
NPIPA1-208	ENST00000545831	RSBN1L	Q6PCB5	846 aa	Predicted RBP	12	□□□□□ -0.49
NPIPA1-208	ENST00000545831	CERS5	Q8N5B7	392 aa		12	□□□□□ -0.49
NPIPA1-208	ENST00000545831	DDRGK1	Q96HY6	314 aa		12	□□□□□ -0.49
NPIPA1-208	ENST00000545831	MRI	Q9BWK5	157 aa		12	□□□□□ -0.49
NPIPA1-208	ENST00000545831	CRNKL1	Q9BZJ0	848 aa	Known RBP	12	□□□□□ -0.49
NPIPA1-208	ENST00000545831	NACAP1	Q9BZK3	213 aa		12	□□□□□ -0.49
NPIPA1-208	ENST00000545831	ARMT1	Q9H993	441 aa		12	□□□□□ -0.49
NPIPA1-208	ENST00000545831	HDAC9	Q9UKV0	1011 aa		12	□□□□□ -0.49
NPIPA1-208	ENST00000545831	RBM8A	Q9Y5S9	174 aa	Known RBP	12	□□□□□ -0.49
NPIPA1-208	ENST00000545831	MROH7-TTC4	A0A0A0MT08	1334 aa		12	□□□□□ -0.49
NPIPA1-208	ENST00000545831	RPAP1	Q9BWH6	1393 aa	Predicted RBP	12	□□□□□ -0.49
NPIPA1-208	ENST00000545831	PSMD14	O00487	310 aa		11.99	□□□□□ -0.49
NPIPA1-208	ENST00000545831	LMNB1	P20700	586 aa		11.99	□□□□□ -0.49
NPIPA1-208	ENST00000545831	ANAPC15	P60006	121 aa		11.99	□□□□□ -0.49
NPIPA1-208	ENST00000545831	DIXDC1	Q155Q3	683 aa		11.99	□□□□□ -0.49
NPIPA1-208	ENST00000545831	HHIPL2	Q6UWX4	724 aa		11.99	□□□□□ -0.49
NPIPA1-208	ENST00000545831	ADGRA1	Q86SQ6	560 aa		11.99	□□□□□ -0.49
NPIPA1-208	ENST00000545831	KIAA0825	Q8IV33	1275 aa		11.99	□□□□□ -0.49
NPIPA1-208	ENST00000545831	LCORL	Q8N3X6	602 aa		11.99	□□□□□ -0.49
NPIPA1-208	ENST00000545831	ZNF384	Q8TF68	577 aa		11.99	□□□□□ -0.49
NPIPA1-208	ENST00000545831	TEKT1	Q969V4	418 aa		11.99	□□□□□ -0.49
NPIPA1-208	ENST00000545831	RIOK1	Q9BRS2	568 aa	Known RBP	11.99	□□□□□ -0.49
NPIPA1-208	ENST00000545831	MXD3	Q9BW11	206 aa		11.99	□□□□□ -0.49
NPIPA1-208	ENST00000545831	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
NPIPA1-208	ENST00000545831	SLC4A4	Q9Y6R1	1079 aa		11.99	□□□□□ -0.49
NPIPA1-208	ENST00000545831	CCDC88A	Q3V6T2	1871 aa		11.99	□□□□□ -0.49
NPIPA1-208	ENST00000545831	MYO5A	Q9Y4I1	1855 aa	Known RBP	11.99	□□□□□ -0.49
NPIPA1-208	ENST00000545831	CHD4	Q14839	1912 aa		11.99	□□□□□ -0.49
NPIPA1-208	ENST00000545831	GAK	O14976	1311 aa		11.98	□□□□□ -0.49
NPIPA1-208	ENST00000545831	GPR75-ASB3	A0A0A6YYF3	556 aa		11.98	□□□□□ -0.49
NPIPA1-208	ENST00000545831	GRIN3B	O60391	1043 aa		11.98	□□□□□ -0.49
NPIPA1-208	ENST00000545831	YBX3	P16989	372 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
NPIPA1-208	ENST00000545831	ANP32A	P39687	249 aa	Known RBP	11.98	□□□□□ -0.49
NPIPA1-208	ENST00000545831	BTD	P43251	543 aa		11.98	□□□□□ -0.49
NPIPA1-208	ENST00000545831	SCNN1D	P51172	638 aa		11.98	□□□□□ -0.49
NPIPA1-208	ENST00000545831	PPP4C	P60510	307 aa		11.98	□□□□□ -0.49
NPIPA1-208	ENST00000545831	DYNLL1	P63167	89 aa	Known RBP	11.98	□□□□□ -0.49
NPIPA1-208	ENST00000545831	CXCL9	Q07325	125 aa		11.98	□□□□□ -0.49
NPIPA1-208	ENST00000545831	NECTIN1	Q15223	517 aa		11.98	□□□□□ -0.49
NPIPA1-208	ENST00000545831	ALX1	Q15699	326 aa		11.98	□□□□□ -0.49
NPIPA1-208	ENST00000545831	VPS53	Q5VIR6	699 aa		11.98	□□□□□ -0.49
NPIPA1-208	ENST00000545831	OGFOD1	Q8N543	542 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms