RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 CHGBP05060 677 aa27.14■■□□□ 1.94
FOXA1-202ENST00000545425 KCNG4Q8TDN1 519 aa27.14■■□□□ 1.94
FOXA1-202ENST00000545425 ZNF830Q96NB3 372 aaPredicted RBP27.14■■□□□ 1.94
FOXA1-202ENST00000545425 PUS3Q9BZE2 481 aaKnown RBP27.14■■□□□ 1.94
FOXA1-202ENST00000545425 FKBP4Q02790 459 aaKnown RBP eCLIP27.13■■□□□ 1.93
FOXA1-202ENST00000545425 MB21D2Q8IYB1 491 aaPredicted RBP27.13■■□□□ 1.93
FOXA1-202ENST00000545425 MRFAP1L1Q96HT8 127 aa27.13■■□□□ 1.93
FOXA1-202ENST00000545425 NAT10Q9H0A0 1025 aaKnown RBP27.13■■□□□ 1.93
FOXA1-202ENST00000545425 ANKRD36CQ5JPF3 1778 aa27.13■■□□□ 1.93
FOXA1-202ENST00000545425 DHX8Q14562 1220 aaKnown RBP27.13■■□□□ 1.93
FOXA1-202ENST00000545425 WASHC4Q2M389 1173 aa27.13■■□□□ 1.93
FOXA1-202ENST00000545425 RALYLQ86SE5 291 aaKnown RBP27.13■■□□□ 1.93
FOXA1-202ENST00000545425 ENGASEQ8NFI3 743 aa27.13■■□□□ 1.93
FOXA1-202ENST00000545425 TRIM5Q9C035 493 aa27.13■■□□□ 1.93
FOXA1-202ENST00000545425 KCNF1Q9H3M0 494 aa27.13■■□□□ 1.93
FOXA1-202ENST00000545425 DTNBO60941 627 aa27.12■■□□□ 1.93
FOXA1-202ENST00000545425 ATP2B3Q16720 1220 aa27.12■■□□□ 1.93
FOXA1-202ENST00000545425 ADALQ6DHV7 355 aa27.12■■□□□ 1.93
FOXA1-202ENST00000545425 AK7Q96M32 723 aa27.12■■□□□ 1.93
FOXA1-202ENST00000545425 AKT1S1Q96B36 256 aa27.11■■□□□ 1.93
FOXA1-202ENST00000545425 USP28Q96RU2 1077 aa27.11■■□□□ 1.93
FOXA1-202ENST00000545425 POLR3EQ9NVU0 708 aa27.11■■□□□ 1.93
FOXA1-202ENST00000545425 RIC1Q4ADV7 1423 aa27.11■■□□□ 1.93
FOXA1-202ENST00000545425 CCT2P78371 535 aaKnown RBP27.11■■□□□ 1.93
FOXA1-202ENST00000545425 MRPS27Q92552 414 aaKnown RBP27.11■■□□□ 1.93
FOXA1-202ENST00000545425 RIPOR2Q9Y4F9 1068 aa27.11■■□□□ 1.93
FOXA1-202ENST00000545425 ZNF213O14771 459 aa27.1■■□□□ 1.93
FOXA1-202ENST00000545425 PRC1O43663 620 aa27.1■■□□□ 1.93
FOXA1-202ENST00000545425 IQCB1Q15051 598 aa27.1■■□□□ 1.93
FOXA1-202ENST00000545425 UBE3CQ15386 1083 aa27.1■■□□□ 1.93
FOXA1-202ENST00000545425 ZNF827Q17R98 1081 aa27.1■■□□□ 1.93
FOXA1-202ENST00000545425 ZMYM6O95789 1325 aa27.1■■□□□ 1.93
FOXA1-202ENST00000545425 ANKRD18BA2A2Z9 1011 aa27.09■■□□□ 1.93
FOXA1-202ENST00000545425 CDKL5O76039 1030 aa27.09■■□□□ 1.93
FOXA1-202ENST00000545425 FGAP02671 866 aa27.09■■□□□ 1.93
FOXA1-202ENST00000545425 UQCRFS1P1P0C7P4 283 aa27.09■■□□□ 1.93
FOXA1-202ENST00000545425 KCNQ4P56696 695 aa27.09■■□□□ 1.93
FOXA1-202ENST00000545425 SNW1Q13573 536 aaKnown RBP27.09■■□□□ 1.93
FOXA1-202ENST00000545425 DNAJC25Q9H1X3 360 aa27.09■■□□□ 1.93
FOXA1-202ENST00000545425 MYH3P11055 1940 aa27.09■■□□□ 1.93
FOXA1-202ENST00000545425 TRDNQ13061 729 aa27.09■■□□□ 1.93
FOXA1-202ENST00000545425 C8orf76Q96K31 380 aa27.09■■□□□ 1.93
FOXA1-202ENST00000545425 METTL24Q5JXM2 366 aa27.08■■□□□ 1.93
FOXA1-202ENST00000545425 DRC7Q8IY82 874 aa27.08■■□□□ 1.93
FOXA1-202ENST00000545425 CEP57L1Q8IYX8 460 aa27.08■■□□□ 1.93
FOXA1-202ENST00000545425 SPC24Q8NBT2 197 aa27.08■■□□□ 1.93
FOXA1-202ENST00000545425 FBXO18Q8NFZ0 1043 aa27.08■■□□□ 1.93
FOXA1-202ENST00000545425 ERVV-1B6SEH8 477 aa27.07■■□□□ 1.92
FOXA1-202ENST00000545425 FDPSP14324 419 aaKnown RBP27.07■■□□□ 1.92
FOXA1-202ENST00000545425 ADORA1P30542 326 aa27.07■■□□□ 1.92
FOXA1-202ENST00000545425 ME1P48163 572 aa27.07■■□□□ 1.92
FOXA1-202ENST00000545425 BPIFA3Q9BQP9 254 aa27.07■■□□□ 1.92
FOXA1-202ENST00000545425 PDGFDQ9GZP0 370 aaPredicted RBP27.07■■□□□ 1.92
FOXA1-202ENST00000545425 TFCP2L1Q9NZI6 479 aa27.07■■□□□ 1.92
FOXA1-202ENST00000545425 LY75O60449 1722 aa27.07■■□□□ 1.92
FOXA1-202ENST00000545425 FOXP2O15409 715 aa27.06■■□□□ 1.92
FOXA1-202ENST00000545425 GPAA1O43292 621 aa27.06■■□□□ 1.92
FOXA1-202ENST00000545425 ADD2P35612 726 aa27.06■■□□□ 1.92
FOXA1-202ENST00000545425 ZAP70P43403 619 aa27.06■■□□□ 1.92
FOXA1-202ENST00000545425 CPLX2Q6PUV4 134 aaKnown RBP27.06■■□□□ 1.92
FOXA1-202ENST00000545425 FSIP1Q8NA03 581 aa27.06■■□□□ 1.92
FOXA1-202ENST00000545425 PYCARDQ9ULZ3 195 aa27.06■■□□□ 1.92
FOXA1-202ENST00000545425 CPLX1O14810 134 aa27.06■■□□□ 1.92
FOXA1-202ENST00000545425 CTSWP56202 376 aa27.06■■□□□ 1.92
FOXA1-202ENST00000545425 NLRP10Q86W26 655 aa27.06■■□□□ 1.92
FOXA1-202ENST00000545425 DNAJC10Q8IXB1 793 aa27.06■■□□□ 1.92
FOXA1-202ENST00000545425 NCOA5Q9HCD5 579 aaKnown RBP27.06■■□□□ 1.92
FOXA1-202ENST00000545425 FAM13BQ9NYF5 915 aa27.06■■□□□ 1.92
FOXA1-202ENST00000545425 NAP1L2Q9ULW6 460 aaPredicted RBP27.06■■□□□ 1.92
FOXA1-202ENST00000545425 KLF18A0A0U1RQI7 1052 aa27.05■■□□□ 1.92
FOXA1-202ENST00000545425 PTGS1P23219 599 aa27.05■■□□□ 1.92
FOXA1-202ENST00000545425 ALX1Q15699 326 aa27.05■■□□□ 1.92
FOXA1-202ENST00000545425 TTLL5Q6EMB2 1281 aa27.05■■□□□ 1.92
FOXA1-202ENST00000545425 LDHAL6AQ6ZMR3 332 aa27.05■■□□□ 1.92
FOXA1-202ENST00000545425 CCDC186Q7Z3E2 898 aa27.05■■□□□ 1.92
FOXA1-202ENST00000545425 FMR1NBQ8N0W7 255 aaPredicted RBP27.05■■□□□ 1.92
FOXA1-202ENST00000545425 LINC00301Q8NCQ3 95 aa27.05■■□□□ 1.92
FOXA1-202ENST00000545425 TTLL11Q8NHH1 800 aa27.05■■□□□ 1.92
FOXA1-202ENST00000545425 ORC3Q9UBD5 711 aaPredicted RBP27.05■■□□□ 1.92
FOXA1-202ENST00000545425 CLIP2Q9UDT6 1046 aa27.05■■□□□ 1.92
FOXA1-202ENST00000545425 ARAP2Q8WZ64 1704 aa27.05■■□□□ 1.92
FOXA1-202ENST00000545425 GOLGA8BA8MQT2 603 aa27.04■■□□□ 1.92
FOXA1-202ENST00000545425 BECN2A8MW95 431 aa27.04■■□□□ 1.92
FOXA1-202ENST00000545425 ZBTB7AO95365 584 aa27.04■■□□□ 1.92
FOXA1-202ENST00000545425 TMEM87BQ96K49 555 aa27.04■■□□□ 1.92
FOXA1-202ENST00000545425 MTFR1LQ9H019 292 aa27.04■■□□□ 1.92
FOXA1-202ENST00000545425 TBC1D2BQ9UPU7 963 aa27.04■■□□□ 1.92
FOXA1-202ENST00000545425 AKAP11Q9UKA4 1901 aa27.04■■□□□ 1.92
FOXA1-202ENST00000545425 ARID4AP29374 1257 aaPredicted RBP27.04■■□□□ 1.92
FOXA1-202ENST00000545425 SLFNL1Q499Z3 407 aa27.04■■□□□ 1.92
FOXA1-202ENST00000545425 FAM89AQ96GI7 184 aa27.04■■□□□ 1.92
FOXA1-202ENST00000545425 GOLPH3LQ9H4A5 285 aa27.04■■□□□ 1.92
FOXA1-202ENST00000545425 ASAP1Q9ULH1 1129 aa27.04■■□□□ 1.92
FOXA1-202ENST00000545425 ITGB4P16144 1822 aa27.04■■□□□ 1.92
FOXA1-202ENST00000545425 PDE8AO60658 829 aa27.03■■□□□ 1.92
FOXA1-202ENST00000545425 ITGA6P23229 1130 aa27.03■■□□□ 1.92
FOXA1-202ENST00000545425 STK38Q15208 465 aa27.03■■□□□ 1.92
FOXA1-202ENST00000545425 PCDHA7Q9UN72 937 aa27.03■■□□□ 1.92
FOXA1-202ENST00000545425 HPS5Q9UPZ3 1129 aa27.03■■□□□ 1.92
FOXA1-202ENST00000545425 MROH5Q6ZUA9 1318 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms